CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_PSEAB (Taurine import ATP-binding protein tauB OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=tauB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.067e-15
Identity = 56/164 (34.15%), Postives = 84/164 (51.22%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            Q+   R+IL+ L+     GE L ++GPSGCGKSTLL+ LA   G  T   G + I+GR      G    V QDDAL+  L   + V    +++    + K ++  RA   ++ +GLQ+     +       LSGGQ++R+ +   +   P  L LDEP   LD+
Sbjct:   15 QRGQRRAILRDLSLGLAKGESLVVLGPSGCGKSTLLNILA---GFQTPDQGRVQIDGRTLEGPGGERGVVFQDDALMPWLNALDNVALGLRIR---GLGKAERTARARQVLQLVGLQEYAEQSVA-----ELSGGQRQRLGLARALAVEPDFLLLDEPFGALDA 167          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_ECOL6 (Taurine import ATP-binding protein tauB OS=Escherichia coli O6 GN=tauB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.067e-15
Identity = 59/176 (33.52%), Postives = 90/176 (51.14%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            G +  L+ +      GELL ++GPSGCGK+TLL+ +AG +     Q G I + G+           V Q++ L+    V + V +  QL     + K+Q+ E A   +K++GL+ A    I  W    LSGGQ++RV I   +   P+LL LDEP   LD+     + + + KL Q
Sbjct:   12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFV---PYQHGSIQLAGKGIQGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMVKKVGLEGAEKRYI--W---QLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQIQTLLLKLWQ 176          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC2_PSEU2 (Phosphonates import ATP-binding protein phnC 2 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=phnC2 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.067e-15
Identity = 62/207 (29.95%), Postives = 106/207 (51.21%), Query Frame = 3
Query:  195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK-----------RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            ++S L  L    +PGE++A++G SG GKSTLL  LAG    +    G++ + GR+           R L      Y+ Q   L+  L+V + V      ++P     L     ++K+RA + ++ +GL D    R     A  LSGGQ++RV+I   +  R +++  DEP + LD  ++  VM  +A +++RD     +T++ ++HQ
Sbjct:   16 HKSALIDLALSIQPGEMVALIGASGSGKSTLLRHLAGLACCDRSNGGQVQVLGREVQSSGRLNSQVRRLR-ADIGYIFQQFNLVNRLSVLDNVLLGCLGRMPRWRGSLALFNNEEKQRAMVALERVGLADLAAQR-----ASTLSGGQQQRVAIARALTQRAEVILADEPIASLDPESARRVMEILADINRRD----GKTVVVTLHQ 212          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_SHIDS (Taurine import ATP-binding protein tauB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=tauB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.393e-15
Identity = 59/176 (33.52%), Postives = 91/176 (51.70%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            G +  L+ +      GELL ++GPSGCGK+TLL+ +AG +     Q G I + G++          V Q++ L+    V + V +  QL     + K+Q+ E A   +K++GL+ A    I  W    LSGGQ++RV I   +   P+LL LDEP   LD+     + + + KL Q
Sbjct:   12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFV---PYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GIEKMQRLEIAYQMLKKVGLEGAEKRYI--W---QLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQ 176          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_ECOUT (Taurine import ATP-binding protein tauB OS=Escherichia coli (strain UTI89 / UPEC) GN=tauB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.819e-15
Identity = 59/176 (33.52%), Postives = 90/176 (51.14%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            G +  L+ +      GELL ++GPSGCGK+TLL+ +AG +     Q G I + G+           V Q++ L+    V + V +  QL     + K+Q+ E A   +K++GL+ A    I  W    LSGGQ++RV I   +   P+LL LDEP   LD+     + + + KL Q
Sbjct:   12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFV---PYQHGSIQLAGKGIQGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMVKKVGLEGAEKRYI--W---QLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQ 176          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_ECOL5 (Taurine import ATP-binding protein tauB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=tauB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.819e-15
Identity = 59/176 (33.52%), Postives = 90/176 (51.14%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            G +  L+ +      GELL ++GPSGCGK+TLL+ +AG +     Q G I + G+           V Q++ L+    V + V +  QL     + K+Q+ E A   +K++GL+ A    I  W    LSGGQ++RV I   +   P+LL LDEP   LD+     + + + KL Q
Sbjct:   12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFV---PYQHGSIQLAGKGIQGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMVKKVGLEGAEKRYI--W---QLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQ 176          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PDR11_YEAST (ATP-dependent permease PDR11 OS=Saccharomyces cerevisiae GN=PDR11 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.819e-15
Identity = 76/260 (29.23%), Postives = 127/260 (48.85%), Query Frame = 3
Query:   30 SIPVPAISRAFEVVESSSNNKTATHSINVNEDDGDGV-----FLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTS-AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPK-LLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782
            S  VP++S  ++   +  N K    ++N +  +   +      ++W+++  T+      G++ ++   +GY   G L A+MG SG GK+TLL+ L+ R  S     GE+LI+G+      A+  S  +V Q D  +  LTV E++  S  L+       L           E  + D             LS  Q++ +SI +E++T+P  LLFLDEPTSGLD+ A+  ++  + KL  +      + I+ +IHQPS  V
Sbjct:  711 SSSVPSVSHQYD---TDYNIKHPDETVNNHTKESVAMETQKHVISWKNINYTI------GDKKLINDASGYISSG-LTALMGESGAGKTTLLNVLSQRTESGV-VTGELLIDGQPLTNIDAFRRSIGFVQQQDVHLELLTVRESLEISCVLRGDGDRDYLGVVSNLLRLPSEKLVAD-------------LSPTQRKLLSIGVELVTKPSLLLFLDEPTSGLDAEAALTIVQFLKKLSMQ-----GQAILCTIHQPSKSV 941          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MDL1_CANAL (ATP-dependent permease MDL1 OS=Candida albicans GN=MDL1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.819e-15
Identity = 73/249 (29.32%), Postives = 122/249 (49.00%), Query Frame = 3
Query:   39 VPAISRAFEVVESSSNNKTATH-SINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLG--SNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            + A  R FE+VE     + + H    V+E +GD   + ++ +  T P   + G   I + L  + + GE + ++GPSG GKST+   L         T Q G+ +I             YV Q+  L +  T+ E + +  +    + +        A   ++   L D ++T+IG   +  LSGGQK+RVS+   ++  PK+L LDE TS LDS +   VMS + +L+ ++ GV   T+I+  H+ S+
Sbjct:  409 IGAAERVFELVEYQP--RISNHLGKKVDELNGD---IEFKGIDFTYPSRPESG---IFKDLNLHIKQGENVCLVGPSGSGKSTVSQLLLRFYDPEKGTIQIGDDVITDLNLNHYRSKLGYVQQEPLLFSG-TIKENILFGKEDATDEEINNALNLSYASNFVRH--LPDGLDTKIGASNSTQLSGGQKQRVSLARTLIRDPKILILDEATSALDSVSEEIVMSNLIQLN-KNRGV---TLISIAHRLST 642          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_BRUSU (Fe(3+) ions import ATP-binding protein fbpC OS=Brucella suis GN=fbpC PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.819e-15
Identity = 64/186 (34.41%), Postives = 93/186 (50.00%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAK---GLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            +K GN + L  L+    PG L+ ++GPSGCGK+T L  LAG        +G IL+ G+            + V Q  AL   +T  E V Y  +        K + +ERAE  +K +GL        GG G +    LSGGQ++RV++   ++  P++L LDEP S LD+     V + I +L QR
Sbjct:   16 KKFGNFTALPNLSLTVEPGTLVTLLGPSGCGKTTTLRLLAGL---EHPTSGRILVGGKDVTNLPANERDVSMVFQSYALFPHMTSLENVAYGLE---SSGFKKNEARERAEEGLKLVGL--------GGMGHRLPAELSGGQQQRVAVARALVLEPQVLLLDEPLSNLDARLRRRVRTEIRELQQR 187          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YVRO_BACSU (Uncharacterized ABC transporter ATP-binding protein yvrO OS=Bacillus subtilis GN=yvrO PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 64/198 (32.32%), Postives = 106/198 (53.54%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALA--GRLGSNTRQAGEI-LINGRKRALAY---GTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMT---IKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770
            IL+ +    + GE LAIMGPSG GKSTL++ +    R  S T    +I ++ G+  ALA     +  +V Q   L+  LT  + V      +LP    K++KKER +     ++++GL+D ++ +        LSGGQK+RV+I   ++ +P+ +  DEPT  LD+ +S  +++  ++L +       +TII   H P
Sbjct:   20 ILKHINLTVQAGEFLAIMGPSGSGKSTLMNIIGCLDRPTSGTYTLDQIDILKGKDGALAEIRNESIGFVFQTFHLLPRLTALQNV------ELPMIYNKVKKKERRQRAYEALEKVGLKDRVSYK-----PPKLSGGQKQRVAIARALVNQPRFILADEPTGALDTKSSEQILALFSELHRE-----GKTIIMITHDP 201          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TAUB_PSEAB1.067e-1534.15Taurine import ATP-binding protein tauB OS=Pseudom... [more]
TAUB_ECOL61.067e-1533.52Taurine import ATP-binding protein tauB OS=Escheri... [more]
PHNC2_PSEU21.067e-1529.95Phosphonates import ATP-binding protein phnC 2 OS=... [more]
TAUB_SHIDS1.393e-1533.52Taurine import ATP-binding protein tauB OS=Shigell... [more]
TAUB_ECOUT1.819e-1533.52Taurine import ATP-binding protein tauB OS=Escheri... [more]
TAUB_ECOL51.819e-1533.52Taurine import ATP-binding protein tauB OS=Escheri... [more]
PDR11_YEAST1.819e-1529.23ATP-dependent permease PDR11 OS=Saccharomyces cere... [more]
MDL1_CANAL1.819e-1529.32ATP-dependent permease MDL1 OS=Candida albicans GN... [more]
FBPC_BRUSU1.819e-1534.41Fe(3+) ions import ATP-binding protein fbpC OS=Bru... [more]
YVRO_BACSU2.376e-1532.32Uncharacterized ABC transporter ATP-binding protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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