CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD2_RHORT (Lipoprotein-releasing system ATP-binding protein lolD 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=lolD2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 64/193 (33.16%), Postives = 101/193 (52.33%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNT---RQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764
            +L+ L+     GE +A++GPSG GKSTLL  L   LG+ +   R  G+ +I   +  LA   +    +V Q   L+   T  E V + A        T+L + ERA   +  +GL+D ++     +GA+ LSGGQK+RV++   ++ RP L+  DEPT  LDS  +  VM+ + +++  D      T + S H
Sbjct:   24 VLKRLSFDINAGERVALVGPSGSGKSTLLAVLGTLLGATSGDLRILGQPMIGLPEAELARFRNRNLGFVFQFHHLLPDFTALENVLFPAAAG-KGRETRLMR-ERARALLVRVGLEDRVD-----YGARKLSGGQKQRVALARALINRPALVLADEPTGNLDSGPAEQVMNLLGEINAED----GTTFLISTH 205          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_BRUAB (Fe(3+) ions import ATP-binding protein fbpC OS=Brucella abortus GN=fbpC PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 65/186 (34.95%), Postives = 93/186 (50.00%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAK---GLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            +K GN + L  L+    PG L+ ++GPSGCGK+T L  LAG        +G ILI G+            + V Q  AL   +T  E V Y  +        K + +ERAE  +K +GL        GG G +    LSGGQ++RV++   ++  P++L LDEP S LD+     V + I +L QR
Sbjct:   16 KKFGNFTALPNLSLTVEPGTLVTLLGPSGCGKTTTLRLLAGL---EHPTSGRILIGGKDVTNLPANERDVSMVFQSYALFPHMTSLENVAYGLE---SSGFKKNEARERAEEGLKLVGL--------GGMGHRLPAELSGGQQQRVAVARALVLEPQVLLLDEPLSTLDARLRRRVRTEIRELQQR 187          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_BRUA2 (Fe(3+) ions import ATP-binding protein fbpC OS=Brucella abortus (strain 2308) GN=fbpC PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 65/186 (34.95%), Postives = 93/186 (50.00%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAK---GLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            +K GN + L  L+    PG L+ ++GPSGCGK+T L  LAG        +G ILI G+            + V Q  AL   +T  E V Y  +        K + +ERAE  +K +GL        GG G +    LSGGQ++RV++   ++  P++L LDEP S LD+     V + I +L QR
Sbjct:   16 KKFGNFTALPNLSLTVEPGTLVTLLGPSGCGKTTTLRLLAGL---EHPTSGRILIGGKDVTNLPANERDVSMVFQSYALFPHMTSLENVAYGLE---SSGFKKNEARERAEEGLKLVGL--------GGMGHRLPAELSGGQQQRVAVARALVLEPQVLLLDEPLSTLDARLRRRVRTEIRELQQR 187          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YFIL_BACSU (Uncharacterized ABC transporter ATP-binding protein yfiL OS=Bacillus subtilis GN=yfiL PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 50/179 (27.93%), Postives = 98/179 (54.75%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRL---GSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            G ++I++G++   + GE   ++GP+G GKST +  ++G +     N    G ++  G++ A A      V Q+ AL  TLT  E + +  ++     +T  + K+RA   ++ +GL +    +I     +  SGG KRR++I   ++ +P+LL +DEPT G+D  +  +++  + +L++
Sbjct:   12 GKKTIVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVPHDSGNITVGGYVI--GKETAKAKQKIGIVPQEIALYPTLTAHENLMFWGKMY---GLTHGEAKKRAAEVLEYVGLTERAKDKI-----ETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNE 180          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD_ALHEH (Lipoprotein-releasing system ATP-binding protein lolD OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=lolD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 70/203 (34.48%), Postives = 102/203 (50.25%), Query Frame = 3
Query:  132 DGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQ----AGEIL--INGRKRA-LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            D   L  +DL     +G    N  +L G+     PGE +AI+G SG GKSTLL  L G L   TR     AGE L  ++ R+R  L      +V Q   L+   T  E V   A   L   +   Q +E+AEM ++++GL D    + G      LSGG+++RV+I   ++TRP+ +  DEPT  LDS  +  +   +++L Q
Sbjct:   11 DAPVLACRDLHKRFKEGPLDVN--VLSGIDLAVAPGEQMAIVGRSGSGKSTLLHLLGG-LDRPTRGEVWLAGEALSSLSERRRGWLRNRNLGFVYQFHHLLPEFTALENV---AMPGLIGGLAPAQAREQAEMILEQVGLADRTRHKPGE-----LSGGERQRVAIARALVTRPRCILADEPTGNLDSHTAERIFELLSELHQ 202          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB27B_ARATH (ABC transporter B family member 27 OS=Arabidopsis thaliana GN=ABCB27 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 73/250 (29.20%), Postives = 119/250 (47.60%), Query Frame = 3
Query:   45 AISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK-----RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDT-MTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            A  R F++++  S+  ++     V   DGD   +   D+W   P    + +  IL+G++    PG  +A++GPSG GK+T+ + L  R     +  G+IL+NG           +   + V+Q+  L    +V E + Y    +   T +    K   A   I+     D  NT +G  G + LSGGQK+R++I   +LT P +L LDE TS LD+ + Y V       D  D  +  RT++   H+ S+
Sbjct:  366 ASRRVFQILDRVSSMSSSGDKCPVGNPDGD---VELNDVWFAYPS---RPSHMILKGISLRLTPGSKVALVGPSGGGKTTIAN-LIERFYDPLK--GKILLNGVSLMEISHQYLHKQISIVSQEPILFNC-SVEENIAYGFDGEASFTDIENAAKMANAHEFIE--AFPDKYNTVVGERGLR-LSGGQKQRIAIARALLTNPSVLLLDEATSALDAESEYLVQ------DAMDSLMAGRTVLVIAHRLST 596          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MDR1_CAEEL (Multidrug resistance protein 1 OS=Caenorhabditis elegans GN=pgp-1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.053e-15
Identity = 68/201 (33.83%), Postives = 99/201 (49.25%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKST---LLDALAGRLGSNTRQAGEILINGRKRAL-----AYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMT-----IKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            IL+GL+    PG+ LA++GPSGCGKST   LL+     LG      GEI I+G +             A V+Q+  L    +++E + Y      P ++T  Q +E A +      I E  L +   TR+G  G + LSGGQK+R++I   ++  PK+L LDE TS LD+ +   V   +      D     RT I   H+
Sbjct: 1094 ILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLG------GEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDC-SIAENIIYGLD---PSSVTMAQVEEAARLANIHNFIAE--LPEGFETRVGDRGTQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEAL------DRAREGRTCIVIAHR 1275          

HSP 2 Score: 74.7146 bits (182), Expect = 6.470e-13
Identity = 70/255 (27.45%), Postives = 119/255 (46.67%), Query Frame = 3
Query:   45 AISRAFEVVESS----SNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLL-------DALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            A S  +EV++      S++K     + +  D      +T +++  T P    + +  IL+G+      G+ +A++G SGCGKST++       D L G++  +     +I +   ++ +A      V+Q+ AL    T+ E +    +    + M    K   AE  IK   L +  NT +G  G + LSGGQK+R++I   ++  PK+L LDE TS LD+ +   V   +      D     RT I   H+ S+
Sbjct:  385 AASGIYEVLDRKPVIDSSSKAGRKDMKIKGD------ITVENVHFTYPS---RPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAV-----VSQEPALFNC-TIEENISLGKEGITREEMVAACKMANAEKFIKT--LPNGYNTLVGDRGTQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQAL------DKAAKGRTTIIIAHRLST 615          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_SHIFL (Taurine import ATP-binding protein tauB OS=Shigella flexneri GN=tauB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 58/176 (32.95%), Postives = 90/176 (51.14%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            G +  L+ +      GELL ++GPSGCGK+TLL+ +AG +     Q G I + G++          V Q++ L+    V + V +  QL     + K+Q+ E A   +K++GL+ A    I  W    LS GQ++RV I   +   P+LL LDEP   LD+     + + + KL Q
Sbjct:   12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFV---PYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GIEKMQRLEIAHQMLKKVGLEGAEKRYI--W---QLSDGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQ 176          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_PSEAE (Taurine import ATP-binding protein tauB OS=Pseudomonas aeruginosa GN=tauB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            Q+   R+IL+ L+     GE L ++GPSGCGKSTLL+ LA   G      G + I+GR      G    V QDDAL+  L   + V    +++    + K ++  RA   ++ +GLQ+     +       LSGGQ++R+ +   +   P  L LDEP   LD+
Sbjct:   15 QRGQRRAILRDLSLGLAKGESLVVLGPSGCGKSTLLNILA---GFQKPDQGRVQIDGRTLEGPGGERGVVFQDDALMPWLNALDNVALGLRIR---GLGKAERTARARQVLQLVGLQEYAEQSVA-----QLSGGQRQRLGLARALAVEPDFLLLDEPFGALDA 167          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_PSYCK (Spermidine/putrescine import ATP-binding protein potA OS=Psychrobacter cryohalolentis (strain K5) GN=potA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 60/183 (32.79%), Postives = 95/183 (51.91%), Query Frame = 3
Query:  195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVT---QDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734
            N  +L+ +    + GE + ++GPSGCGK+TLL  +AG        AG I ++G + A        V    Q  AL   +TV++ V Y  +L+    + K++ + R    +  + L+   N R      + LSGGQ++RV+I   ++ RPKLL LDEP S LD      + S + +L QR+ G+
Sbjct:   33 NTEVLKDINLDIKHGEFITLLGPSGCGKTTLLRLIAG---FEQPSAGAIYLDGVQMAGLPADKRPVNTVFQQYALFPHMTVAQNVAYGLKLR---KVPKVEIQTRVREMLAMVQLEHLANRR-----PQDLSGGQQQRVAIARAVINRPKLLLLDEPLSALDHKLRLQMQSELKRL-QRELGI 203          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LOLD2_RHORT2.376e-1533.16Lipoprotein-releasing system ATP-binding protein l... [more]
FBPC_BRUAB2.376e-1534.95Fe(3+) ions import ATP-binding protein fbpC OS=Bru... [more]
FBPC_BRUA22.376e-1534.95Fe(3+) ions import ATP-binding protein fbpC OS=Bru... [more]
YFIL_BACSU3.103e-1527.93Uncharacterized ABC transporter ATP-binding protei... [more]
LOLD_ALHEH3.103e-1534.48Lipoprotein-releasing system ATP-binding protein l... [more]
AB27B_ARATH3.103e-1529.20ABC transporter B family member 27 OS=Arabidopsis ... [more]
MDR1_CAEEL4.053e-1533.83Multidrug resistance protein 1 OS=Caenorhabditis e... [more]
TAUB_SHIFL5.293e-1532.95Taurine import ATP-binding protein tauB OS=Shigell... [more]
TAUB_PSEAE5.293e-1533.54Taurine import ATP-binding protein tauB OS=Pseudom... [more]
POTA_PSYCK5.293e-1532.79Spermidine/putrescine import ATP-binding protein p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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