CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: UGPC2_RHIEC (sn-glycerol-3-phosphate import ATP-binding protein ugpC 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ugpC2 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.913e-15 Identity = 59/190 (31.05%), Postives = 97/190 (51.05%), Query Frame = 3 Query: 165 VTVPDGQKK-GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 +++ D +K G ++ G+ + GE + I+GPSGCGKSTLL +A G GEI I+GR + A V Q+ AL +TV+E + Y+ ++ + K ++ R K + L+ ++ R LSGGQ++RV++ M+ PK+ DEP S LD+ + + I +L +R Sbjct: 4 ISIRDVKKSYGKHPVVHGVDLEIQSGEFIVILGPSGCGKSTLLRMIA---GLEEITGGEIAIDGRVVNQMEPRERGCAMVFQNYALYPHMTVAENIGYALKVA---GVAKTERSRRIAEVAKALSLEPFLDRR-----PAALSGGQRQRVAMGRAMIREPKVFLFDEPLSNLDAKLRIAMRAEIRRLHRR 182
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC2_PSE14 (Phosphonates import ATP-binding protein phnC 2 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=phnC2 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.913e-15 Identity = 61/207 (29.47%), Postives = 103/207 (49.76%), Query Frame = 3 Query: 195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK-----------RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 ++S L L +PGE++A++G SG GKSTLL LAG + G++ + GR+ R L Y+ Q L+ L+V + V ++P L ++K+RA + +GL D R A LSGGQ++RV+I + R +++ DEP + LD ++ VM +A +++ D +T++ ++HQ Sbjct: 16 HKSALVDLALSIQPGEMVALIGASGSGKSTLLRHLAGLACCDRSNGGQVQVLGREVQSSGRLNSQVRRLR-ADIGYIFQQFNLVNRLSVLDNVLLGCLGRMPRWRGSLALFNREEKQRAMAALDRVGLADLATQR-----ASTLSGGQQQRVAIARALTQRAEVILADEPIASLDPESARRVMEILADINRSD----GKTVVVTLHQ 212
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_MARAV (Macrolide export ATP-binding/permease protein macB OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=macB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.913e-15 Identity = 67/198 (33.84%), Postives = 98/198 (49.49%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA---------LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770 +L+G+ PGE +AIMGPSG GKSTL++ L G L + AG+ NGR + L +V Q L+ +T E V A + M ++ RAE + +GL + ++ R LSGGQ++RVSI ++ +L+F DEPT LDS +S V+ + L ++ H TII H P Sbjct: 25 VLKGIDLKIWPGEFVAIMGPSGSGKSTLMNIL-GCLDQPS--AGQYRFNGRDVSALDRDELARLRRDAFGFVFQSYNLLPGMTARENVEIPA---IYAGMAPAERHARAERLLTGLGLGERLSHR-----PAQLSGGQQQRVSIARALMNGGQLIFADEPTGALDSKSSQEVIRLLTDLSRQGH-----TIILITHDP 206
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YXDL_BACSU (ABC transporter ATP-binding protein yxdL OS=Bacillus subtilis GN=yxdL PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.029e-15 Identity = 61/191 (31.94%), Postives = 98/191 (51.31%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING------RKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQ--LPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 GE A+MGPSG GK+TLL+ ++ + +G+ILING ++ LA+ +V QD L+ TLT+ E + L+ P M +E+ ++G+++ +N R +SGGQ++R +I ++ +P L+ DEPT LDS A+ VM + L++ DH T + H P S Sbjct: 33 GEFTAVMGPSGSGKTTLLNIIST---IDRPDSGDILINGENPHRLKRTKLAHFRRKQLGFVFQDFNLLDTLTIGENIMLPLTLEKEAPSVM-----EEKLHGIAAKLGIENLLNKR-----TFEVSGGQRQRAAIARAVIHKPSLILADEPTGNLDSKATKDVMETLQSLNRDDH----VTALMVTHDPVS 206
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB13I_ARATH (Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana GN=TGD3 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14 Identity = 68/204 (33.33%), Postives = 99/204 (48.53%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA-------LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEML-------TRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH-GVGSRTIIAS 758 G + IL+G++ R GE + ++GPSG GKST+L +AG L + GE+ I G+KRA ++ V Q AL +L+V E V + L M++ Q E T+ +GL+ N LSGG K+RV++ ++ P++L DEPT+GLD AS V I + D VG IAS Sbjct: 95 GEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPD---KGEVYIRGKKRAGLISDEEISGLRIGLVFQSAALFDSLSVRENVGF--LLYERSKMSENQISELVTQTLAAVGLKGVENRL-----PSELSGGMKKRVALARSLIFDTTKEVIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHMTDEDAVGKPGKIAS 288
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_RALSO (Aliphatic sulfonates import ATP-binding protein ssuB OS=Ralstonia solanacearum GN=ssuB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14 Identity = 61/180 (33.89%), Postives = 93/180 (51.67%), Query Frame = 3 Query: 183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 ++ G R +L G+ PGE +AI+G SGCGKSTLL +AG G + G + +G + + + QD L+ V + V L LP T + +A + ++GL + R G W A+ LSGGQ++RV++ ++ RP+LL LDEP LD+ + + I L QR Sbjct: 28 KRYGEREVLYGIDLEIAPGEFVAIVGRSGCGKSTLLRLIAGLEGID---GGSLHRDGAAGGGLHDDARVMFQDARLLPWKRVLDNV----ALGLPRT-----HRAQAAEVLAQVGLAE----RAGEWPAR-LSGGQRQRVALARALVHRPRLLLLDEPLGALDALTRIDMQNLIEGLWQR 190
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MDR2_MOUSE (Multidrug resistance protein 2 OS=Mus musculus GN=Abcb4 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14 Identity = 79/245 (32.24%), Postives = 123/245 (50.20%), Query Frame = 3 Query: 60 FEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK------RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 F+++++ N K + S ++ D L + D+ + P + N IL+GL + G+ +A++G SGCGKST + L RL T G+I I+G+ R L V+Q+ L +T T++E + Y D + K K+ A I M L +T +G GA+ LSGGQK+R++I ++ PK+L LDE TS LD+ + V A LD+ G RT I H+ S+ Sbjct: 365 FDIIDN--NPKIDSFSERGHKPDNIKGNLEFSDVHFSYPS---RANIKILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQ-RLYDPTE--GKISIDGQDIRNFNVRCLRE-IIGVVSQEPVLFST-TIAENIRYGRGNVTMDEIEKAVKEANAYDFI--MKLPQKFDTLVGDRGAQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQ---AALDKAREG---RTTIVIAHRLST 590 HSP 2 Score: 76.6406 bits (187), Expect = 1.703e-13 Identity = 56/205 (27.32%), Postives = 106/205 (51.71%), Query Frame = 3 Query: 189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLL-------DALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYY--SAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 + N +LQGL+ + G+ LA++G SGCGKST++ D +AG + + ++A ++ + + L + + ++ +++E + Y ++++ D + + K+ I+ L NTR+G G + LSGGQK+R++I ++ +P++L LDE TS LD+ + V + K + RT I H+ S+ Sbjct: 1043 RANVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVLLDGQEAKKLNVQWLRAQLG------IVSQEPILFDCSIAENIAYGDNSRVVPHDEIVRAAKEANIHPFIET--LPQKYNTRVGDKGTQ-LSGGQKQRIAIARALIRQPRVLLLDEATSALDTESEKVVQEALDKARE------GRTCIVIAHRLST 1232
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD1_RHORT (Lipoprotein-releasing system ATP-binding protein lolD 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=lolD1 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14 Identity = 69/206 (33.50%), Postives = 100/206 (48.54%), Query Frame = 3 Query: 198 RSILQGLTGY---ARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING---------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKE---RAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770 R +L LTG PGE++A++GPSG GKSTLL + G L T AGE+ I G R+ L +V Q L+ + +E + +P + + +K RA + +MGL + + R G LSGG+++RV+IC + RPKLL DEPT LD + V + L + G G +IA+ H P Sbjct: 19 REVLNVLTGADLAVNPGEIVALVGPSGAGKSTLLQ-ICGLLEKPT--AGEVRIGGISCGQLSEDRRTLLRRDHLGFVYQYHHLLPEFSAAENIV------VPQMIAGIGRKPALARAAELLAKMGLSERQDHRPGQ-----LSGGEQQRVAICRALANRPKLLLADEPTGNLDPNTAERVFQALLDLVR---GEGLAALIAT-HNP 206
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_BRUME (Fe(3+) ions import ATP-binding protein fbpC OS=Brucella melitensis GN=fbpC PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14 Identity = 64/186 (34.41%), Postives = 92/186 (49.46%), Query Frame = 3 Query: 183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAK---GLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 +K GN + L L+ PG L+ ++G SGCGK+T L LAG +G ILI G+ + V Q AL +T E V Y + K + +ERAE +K +GL GG G + LSGGQ++RV++ ++ P++L LDEP S LD+ V + I +L QR Sbjct: 16 KKFGNFTALPNLSLTVEPGTLVTLLGLSGCGKTTTLRLLAGL---EHPTSGRILIGGKDVTNLPANERDVSMVFQSYALFPHMTSLENVAYGLE---SSGFKKNEARERAEEGLKLVGL--------GGMGHRLPAELSGGQQQRVAVARALVLEPQVLLLDEPLSNLDARLRRRVRTEIRELQQR 187
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YXLF_BACSU (Uncharacterized ABC transporter ATP-binding protein yxlF OS=Bacillus subtilis GN=yxlF PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14 Identity = 54/192 (28.12%), Postives = 100/192 (52.08%), Query Frame = 3 Query: 207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782 ++ ++ + E +A++GP+G GK+T L LAG L + G I + G K+ L Y+ Q A + +T +E + ++ +L ++K + +E+ ++ +GL +A + RIGG+ SGG K+R+ + +L +PK L LDEP S LD + V+ + +L + + S ++ Q +V Sbjct: 17 VKNVSFHVNENECVALLGPNGAGKTTTLQMLAGLLSPTS---GTIKLLGEKK-LDRRLIGYLPQYPAFYSWMTANEFLTFAGRLS---GLSKRKCQEKIGEMLEFVGLHEAAHKRIGGY-----SGGMKQRLGLAQALLHKPKFLILDEPVSALDPTGRFEVLDMMRELKKHMAVLFSTHVLHDAEQVCDQV 196 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |