CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y2668_BACC1 (Putative ABC transporter ATP-binding protein BCE_2668 OS=Bacillus cereus (strain ATCC 10987) GN=BCE_2668 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14
Identity = 72/234 (30.77%), Postives = 106/234 (45.30%), Query Frame = 3
Query:   81 SNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKK--------------GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQD-DALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713
            SNN       N+  +   GV   W +      D   K                + +L  +      GE++A++G +G GKSTL  +L   +G N  +   ILI+G        RKR       +YV Q+ + +IT  TV E + +S +L+     +K + K RAE T+K   L    N     W  + LS GQK+R++I   + T PKL+ LDEPT+G D       M+ I KL
Sbjct:  260 SNNDVIYPLENLQRESVSGVINEWMEKQTFCKDTPTKKELLKVENLSFSYPNKQKVLDNVNFSLFKGEIVALLGHNGAGKSTLAHSL---IGINKTKNDRILIDGVNINSWSIRKRGEVI---SYVMQNPNHMITQATVMEEISFSLKLK---KFSKEEIKVRAEETLKICDLYPFRN-----WPIQALSYGQKKRLTIASVLTTNPKLIILDEPTAGQDYYHYKQFMTFIRKL 479          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_SHIF8 (Taurine import ATP-binding protein tauB OS=Shigella flexneri serotype 5b (strain 8401) GN=tauB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14
Identity = 57/176 (32.39%), Postives = 89/176 (50.57%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            G +  L+ +      GELL ++GPSGCGK+TLL+ +AG +     Q G I + G++          V Q++ L+    V + V +  QL     + K+Q+ E A   +K++GL+ A    I  W    LS GQ++RV I   +   P+LL LDEP    D+     + + + KL Q
Sbjct:   12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFV---PYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GIEKMQRLEIAHQMLKKVGLEGAEKRYI--W---QLSDGQRQRVGIARALAANPQLLLLDEPFGAQDAFTRDQMQTLLLKLWQ 176          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB1_XANAC (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Xanthomonas axonopodis pv. citri GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14
Identity = 53/184 (28.80%), Postives = 94/184 (51.09%), Query Frame = 3
Query:  180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHG 731
            G++ G R +L+ +     PGE+++++G SGCGKSTLL  LA   G     AGE+ ++G +         ++ Q+  L+  L V+  V ++ +  L     +  +  R +  + ++GL D           K LSGGQ +RV++   +  +P++L LDEP S +D+     +   + +L   +HG
Sbjct:   12 GKRFGTRQVLRDIDLQLAPGEIVSLIGASGCGKSTLLRILA---GLERDYAGEVALDGARVRGVDRQIGFIFQEPRLLPWLDVAANVAFADEADLSPAAAR--QSARVQQLLAQVGLLDYATAL-----PKQLSGGQAQRVALARGLYRQPRVLLLDEPFSAVDAFTRIKLQDLLLRL-AGEHG 184          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PSTB_TROW8 (Phosphate import ATP-binding protein pstB OS=Tropheryma whipplei (strain TW08/27) GN=pstB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14
Identity = 53/171 (30.99%), Postives = 92/171 (53.80%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDAL--AGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALIT-------TLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            G + A++GPSGCGKSTLL  L     L    +  G++L++GR   L      YV Q+  +I+       T+++ E V    +L     + ++Q+ E  E  ++ + L D ++ R+G  G + LSGGQ++R+ I   +   P+++ +DEP S LD  ++  +   I KL ++
Sbjct:   30 GSVTALIGPSGCGKSTLLRTLNRMHELSPGAKVKGQVLLDGRD--LYQLDPVYVRQEVGMISQRPNPFPTMSIRENVLAGIKLNRK-RIHRIQQNELMERCLRSVNLWDEVHNRLGRPGGE-LSGGQQQRLCIARAIAVSPRVILMDEPCSALDPVSTKAIEQLICKLKEK 196          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_ALCFA (Phosphonates import ATP-binding protein phnC OS=Alcaligenes faecalis GN=phnC PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14
Identity = 67/200 (33.50%), Postives = 103/200 (51.50%), Query Frame = 3
Query:  207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA--------LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQL----PDTMTKLQKKE--RAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764
            L+G+    +PGELL ++GPSG GKSTL+  +  RL   +   G +L+NG+  A        +A      + Q+ AL+  LTV E +  S +L      P    +   ++   A   ++ +GL    N R     A  LSGGQ++RV I   ++ +P LL +DEPT+ LD   S  VM  + +L  R+HG+ +   I +IH
Sbjct:   18 LKGVNLSVQPGELLGLIGPSGAGKSTLIRCV-NRLVEPSE--GRVLLNGKDLANLGRHDLRMARRRIGMIFQEYALVERLTVMENLL-SGRLGYSGFWPSWFRRFSPEDIRLAYALLERVGLDGMHNKR-----ADALSGGQRQRVGIARALMQKPDLLLVDEPTASLDPKTSRQVMRLVLEL-CREHGLSA---IINIH 204          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MDR2_RAT (Multidrug resistance protein 2 OS=Rattus norvegicus GN=Abcb4 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14
Identity = 77/243 (31.69%), Postives = 120/243 (49.38%), Query Frame = 3
Query:   60 FEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQA----GEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            F+++++  N K  + S   ++ D     L + D+  + P    + N  IL+GL    + G+ +A++G SGCGKST +  L  RL   T       G+ + N   R L       V+Q+  L +T T++E + Y       D + K  K+  A   I  M L    +T +G  GA+ LSGGQK+R++I   ++  PK+L LDE TS LD+ +   V    A LD+   G   RT I   H+ S+
Sbjct:  365 FDIIDN--NPKIDSFSERGHKPDSIKGNLEFSDVHFSYPS---RANIKILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQ-RLYDPTEGTISIDGQDIRNFNVRCLREFIGV-VSQEPVLFST-TIAENIRYGRGNVTMDEIKKAVKEANAYDFI--MKLPQKFDTLVGDRGAQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQ---AALDKAREG---RTTIVIAHRLST 590          

HSP 2 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 54/205 (26.34%), Postives = 105/205 (51.22%), Query Frame = 3
Query:  189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLL-------DALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYY--SAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            + N  +LQGL+   + G+ LA++G SGCGKST++       D +AG +  + ++A ++ +   +  L       +   + ++   ++++ + Y  ++++   D + +  K+      I+   L     TR+G  G + LSGGQK+R++I   ++ +P++L LDE TS LD+ +   V   + K  +       RT I   H+ S+
Sbjct: 1045 RANVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGTVLLDGQEAKKLNVQWLRAQLG------IVSQEPILFDCSIAKNIAYGDNSRVVSQDEIVRAAKEANIHPFIET--LPQKYETRVGDKGTQ-LSGGQKQRIAIARALIRQPRVLLLDEATSALDTESEKVVQEALDKARE------GRTCIVIAHRLST 1234          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_AGRT5 (Fe(3+) ions import ATP-binding protein fbpC OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=fbpC PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14
Identity = 58/166 (34.94%), Postives = 87/166 (52.41%), Query Frame = 3
Query:  234 PGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            PG L+ ++GPSGCGK+T L  LAG    N+   G ILI G+   +        + V Q  AL   ++  + V Y  Q      + K + +E+AE  +K +GL   M  R+       LSGGQ++RV++   ++  P++L LDEP S LD+     V + I +L QR
Sbjct:   33 PGTLVTLLGPSGCGKTTTLRMLAGLEHPNS---GRILIGGKDVTMLPANERDVSMVFQSYALFPHMSALDNVAYGLQ---SSGLKKAEAREKAEEGLKLVGLA-GMGHRLPA----ELSGGQQQRVAVARALVLEPQVLLLDEPLSNLDARLRRRVRTDIRELQQR 187          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: UGPC2_AGRT5 (sn-glycerol-3-phosphate import ATP-binding protein ugpC 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ugpC2 PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14
Identity = 59/180 (32.78%), Postives = 89/180 (49.44%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            G    L G+      GE + I+GPSGCGKSTLL  +AG        +GEI I GR            A V Q+ AL   ++V+  + Y+ ++     + K +++ R E T K +GL D +  +        LSGGQ++RV++   ++  P +   DEP S LD+     + + I KL QR
Sbjct:   14 GKTPTLHGVDLSFDSGEFVVILGPSGCGKSTLLRMIAGL---EEITSGEIAIGGRVVNTLEPRERGCAMVFQNYALYPHMSVAANIGYALKVA---GVPKAERQRRIEETAKIVGLSDYLERK-----PAALSGGQRQRVAMARAIIREPAVFLFDEPLSNLDAKLRVSMRAEIRKLHQR 182          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_BACSU (Aliphatic sulfonates import ATP-binding protein ssuB OS=Bacillus subtilis GN=ssuB PE=1 SV=4)

HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14
Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 3
Query:  171 VPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            V +G+K    ++L+ +     PGE L ++GPSGCGKSTLL  +A   G ++   G + INGR          ++ Q+  L   LTV + +  +A L L D   K +  E  E+ ++  G + A          + LSGG  +RV+I   +L  P++L LDEP   LD+
Sbjct:   13 VQEGRKN---TVLENIELSIAPGEFLTLIGPSGCGKSTLLKIIA---GLDSEYDGSVEINGRSVTAPGIQQGFIFQEHRLFPWLTVEQNI--AADLNLKDPKVKQKVDELIEI-VRLKGSEKAY--------PRELSGGMSQRVAIARALLREPEVLLLDEPFGALDA 163          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: METN_CORDI (Methionine import ATP-binding protein metN OS=Corynebacterium diphtheriae GN=metN PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14
Identity = 63/201 (31.34%), Postives = 100/201 (49.75%), Query Frame = 3
Query:  189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            K N + L G+T    PGE+L ++G SG GKSTL+  + G    +T  +G++L++G        +K          + Q   L T+ T +  + Y  +L   D   K ++K R +  +  +GL D      GG   + LSGGQK+RV I   +   P LL  DE TS LD   ++ V+  + K++ R+ G+   TI+   H+
Sbjct:   19 KKNITALDGVTLTVEPGEILGVIGYSGAGKSTLVRMINGL---DTPTSGKLLLDGTDIVGMSEKKLRDIRAHIGMIFQQFNLFTSRTAAGNIEYPLKLAGVD---KAERKRRVDELLAFVGLSDR-----GGNYPEELSGGQKQRVGIARALANNPALLLADEATSALDPETTHEVLELLRKVN-RELGI---TIVVITHE 204          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2668_BACC12.627e-1430.77Putative ABC transporter ATP-binding protein BCE_2... [more]
TAUB_SHIF82.627e-1432.39Taurine import ATP-binding protein tauB OS=Shigell... [more]
SSUB1_XANAC2.627e-1428.80Aliphatic sulfonates import ATP-binding protein ss... [more]
PSTB_TROW82.627e-1430.99Phosphate import ATP-binding protein pstB OS=Troph... [more]
PHNC_ALCFA2.627e-1433.50Phosphonates import ATP-binding protein phnC OS=Al... [more]
MDR2_RAT2.627e-1431.69Multidrug resistance protein 2 OS=Rattus norvegicu... [more]
FBPC_AGRT52.627e-1434.94Fe(3+) ions import ATP-binding protein fbpC OS=Agr... [more]
UGPC2_AGRT53.431e-1432.78sn-glycerol-3-phosphate import ATP-binding protein... [more]
SSUB_BACSU3.431e-1433.33Aliphatic sulfonates import ATP-binding protein ss... [more]
METN_CORDI3.431e-1431.34Methionine import ATP-binding protein metN OS=Cory... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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