CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y2668_BACC1 (Putative ABC transporter ATP-binding protein BCE_2668 OS=Bacillus cereus (strain ATCC 10987) GN=BCE_2668 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14 Identity = 72/234 (30.77%), Postives = 106/234 (45.30%), Query Frame = 3 Query: 81 SNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKK--------------GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQD-DALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 SNN N+ + GV W + D K + +L + GE++A++G +G GKSTL +L +G N + ILI+G RKR +YV Q+ + +IT TV E + +S +L+ +K + K RAE T+K L N W + LS GQK+R++I + T PKL+ LDEPT+G D M+ I KL Sbjct: 260 SNNDVIYPLENLQRESVSGVINEWMEKQTFCKDTPTKKELLKVENLSFSYPNKQKVLDNVNFSLFKGEIVALLGHNGAGKSTLAHSL---IGINKTKNDRILIDGVNINSWSIRKRGEVI---SYVMQNPNHMITQATVMEEISFSLKLK---KFSKEEIKVRAEETLKICDLYPFRN-----WPIQALSYGQKKRLTIASVLTTNPKLIILDEPTAGQDYYHYKQFMTFIRKL 479
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_SHIF8 (Taurine import ATP-binding protein tauB OS=Shigella flexneri serotype 5b (strain 8401) GN=tauB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14 Identity = 57/176 (32.39%), Postives = 89/176 (50.57%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 G + L+ + GELL ++GPSGCGK+TLL+ +AG + Q G I + G++ V Q++ L+ V + V + QL + K+Q+ E A +K++GL+ A I W LS GQ++RV I + P+LL LDEP D+ + + + KL Q Sbjct: 12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFV---PYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GIEKMQRLEIAHQMLKKVGLEGAEKRYI--W---QLSDGQRQRVGIARALAANPQLLLLDEPFGAQDAFTRDQMQTLLLKLWQ 176
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB1_XANAC (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Xanthomonas axonopodis pv. citri GN=ssuB1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14 Identity = 53/184 (28.80%), Postives = 94/184 (51.09%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHG 731 G++ G R +L+ + PGE+++++G SGCGKSTLL LA G AGE+ ++G + ++ Q+ L+ L V+ V ++ + L + + R + + ++GL D K LSGGQ +RV++ + +P++L LDEP S +D+ + + +L +HG Sbjct: 12 GKRFGTRQVLRDIDLQLAPGEIVSLIGASGCGKSTLLRILA---GLERDYAGEVALDGARVRGVDRQIGFIFQEPRLLPWLDVAANVAFADEADLSPAAAR--QSARVQQLLAQVGLLDYATAL-----PKQLSGGQAQRVALARGLYRQPRVLLLDEPFSAVDAFTRIKLQDLLLRL-AGEHG 184
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PSTB_TROW8 (Phosphate import ATP-binding protein pstB OS=Tropheryma whipplei (strain TW08/27) GN=pstB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14 Identity = 53/171 (30.99%), Postives = 92/171 (53.80%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDAL--AGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALIT-------TLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 G + A++GPSGCGKSTLL L L + G++L++GR L YV Q+ +I+ T+++ E V +L + ++Q+ E E ++ + L D ++ R+G G + LSGGQ++R+ I + P+++ +DEP S LD ++ + I KL ++ Sbjct: 30 GSVTALIGPSGCGKSTLLRTLNRMHELSPGAKVKGQVLLDGRD--LYQLDPVYVRQEVGMISQRPNPFPTMSIRENVLAGIKLNRK-RIHRIQQNELMERCLRSVNLWDEVHNRLGRPGGE-LSGGQQQRLCIARAIAVSPRVILMDEPCSALDPVSTKAIEQLICKLKEK 196
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_ALCFA (Phosphonates import ATP-binding protein phnC OS=Alcaligenes faecalis GN=phnC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14 Identity = 67/200 (33.50%), Postives = 103/200 (51.50%), Query Frame = 3 Query: 207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA--------LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQL----PDTMTKLQKKE--RAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 L+G+ +PGELL ++GPSG GKSTL+ + RL + G +L+NG+ A +A + Q+ AL+ LTV E + S +L P + ++ A ++ +GL N R A LSGGQ++RV I ++ +P LL +DEPT+ LD S VM + +L R+HG+ + I +IH Sbjct: 18 LKGVNLSVQPGELLGLIGPSGAGKSTLIRCV-NRLVEPSE--GRVLLNGKDLANLGRHDLRMARRRIGMIFQEYALVERLTVMENLL-SGRLGYSGFWPSWFRRFSPEDIRLAYALLERVGLDGMHNKR-----ADALSGGQRQRVGIARALMQKPDLLLVDEPTASLDPKTSRQVMRLVLEL-CREHGLSA---IINIH 204
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MDR2_RAT (Multidrug resistance protein 2 OS=Rattus norvegicus GN=Abcb4 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14 Identity = 77/243 (31.69%), Postives = 120/243 (49.38%), Query Frame = 3 Query: 60 FEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQA----GEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 F+++++ N K + S ++ D L + D+ + P + N IL+GL + G+ +A++G SGCGKST + L RL T G+ + N R L V+Q+ L +T T++E + Y D + K K+ A I M L +T +G GA+ LSGGQK+R++I ++ PK+L LDE TS LD+ + V A LD+ G RT I H+ S+ Sbjct: 365 FDIIDN--NPKIDSFSERGHKPDSIKGNLEFSDVHFSYPS---RANIKILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQ-RLYDPTEGTISIDGQDIRNFNVRCLREFIGV-VSQEPVLFST-TIAENIRYGRGNVTMDEIKKAVKEANAYDFI--MKLPQKFDTLVGDRGAQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQ---AALDKAREG---RTTIVIAHRLST 590 HSP 2 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 54/205 (26.34%), Postives = 105/205 (51.22%), Query Frame = 3 Query: 189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLL-------DALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYY--SAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 + N +LQGL+ + G+ LA++G SGCGKST++ D +AG + + ++A ++ + + L + + ++ ++++ + Y ++++ D + + K+ I+ L TR+G G + LSGGQK+R++I ++ +P++L LDE TS LD+ + V + K + RT I H+ S+ Sbjct: 1045 RANVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGTVLLDGQEAKKLNVQWLRAQLG------IVSQEPILFDCSIAKNIAYGDNSRVVSQDEIVRAAKEANIHPFIET--LPQKYETRVGDKGTQ-LSGGQKQRIAIARALIRQPRVLLLDEATSALDTESEKVVQEALDKARE------GRTCIVIAHRLST 1234
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_AGRT5 (Fe(3+) ions import ATP-binding protein fbpC OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=fbpC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14 Identity = 58/166 (34.94%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 234 PGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 PG L+ ++GPSGCGK+T L LAG N+ G ILI G+ + + V Q AL ++ + V Y Q + K + +E+AE +K +GL M R+ LSGGQ++RV++ ++ P++L LDEP S LD+ V + I +L QR Sbjct: 33 PGTLVTLLGPSGCGKTTTLRMLAGLEHPNS---GRILIGGKDVTMLPANERDVSMVFQSYALFPHMSALDNVAYGLQ---SSGLKKAEAREKAEEGLKLVGLA-GMGHRLPA----ELSGGQQQRVAVARALVLEPQVLLLDEPLSNLDARLRRRVRTDIRELQQR 187
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: UGPC2_AGRT5 (sn-glycerol-3-phosphate import ATP-binding protein ugpC 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ugpC2 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14 Identity = 59/180 (32.78%), Postives = 89/180 (49.44%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 G L G+ GE + I+GPSGCGKSTLL +AG +GEI I GR A V Q+ AL ++V+ + Y+ ++ + K +++ R E T K +GL D + + LSGGQ++RV++ ++ P + DEP S LD+ + + I KL QR Sbjct: 14 GKTPTLHGVDLSFDSGEFVVILGPSGCGKSTLLRMIAGL---EEITSGEIAIGGRVVNTLEPRERGCAMVFQNYALYPHMSVAANIGYALKVA---GVPKAERQRRIEETAKIVGLSDYLERK-----PAALSGGQRQRVAMARAIIREPAVFLFDEPLSNLDAKLRVSMRAEIRKLHQR 182
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_BACSU (Aliphatic sulfonates import ATP-binding protein ssuB OS=Bacillus subtilis GN=ssuB PE=1 SV=4) HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14 Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 3 Query: 171 VPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674 V +G+K ++L+ + PGE L ++GPSGCGKSTLL +A G ++ G + INGR ++ Q+ L LTV + + +A L L D K + E E+ ++ G + A + LSGG +RV+I +L P++L LDEP LD+ Sbjct: 13 VQEGRKN---TVLENIELSIAPGEFLTLIGPSGCGKSTLLKIIA---GLDSEYDGSVEINGRSVTAPGIQQGFIFQEHRLFPWLTVEQNI--AADLNLKDPKVKQKVDELIEI-VRLKGSEKAY--------PRELSGGMSQRVAIARALLREPEVLLLDEPFGALDA 163
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: METN_CORDI (Methionine import ATP-binding protein metN OS=Corynebacterium diphtheriae GN=metN PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14 Identity = 63/201 (31.34%), Postives = 100/201 (49.75%), Query Frame = 3 Query: 189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 K N + L G+T PGE+L ++G SG GKSTL+ + G +T +G++L++G +K + Q L T+ T + + Y +L D K ++K R + + +GL D GG + LSGGQK+RV I + P LL DE TS LD ++ V+ + K++ R+ G+ TI+ H+ Sbjct: 19 KKNITALDGVTLTVEPGEILGVIGYSGAGKSTLVRMINGL---DTPTSGKLLLDGTDIVGMSEKKLRDIRAHIGMIFQQFNLFTSRTAAGNIEYPLKLAGVD---KAERKRRVDELLAFVGLSDR-----GGNYPEELSGGQKQRVGIARALANNPALLLADEATSALDPETTHEVLELLRKVN-RELGI---TIVVITHE 204 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |