CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CMPD_SYNY3 (Bicarbonate transport ATP-binding protein cmpD OS=Synechocystis sp. (strain PCC 6803) GN=cmpD PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14
Identity = 64/204 (31.37%), Postives = 102/204 (50.00%), Query Frame = 3
Query:   63 EVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            + ++S     TAT S     D     FLT +++    P    KG  ++L+ +      GE + ++G SGCGKSTLL+ ++G   S T   G + + G+           V Q+ AL+  LT  E VY +    +    T+ +K+  A+  +  +GL D+M+ + G      +SGG K+RVSI   +  RP++L LDEP   LD+
Sbjct:    2 QTLKSQRAMPTATPS-----DQKTTAFLTIENVSKVYPTA--KGPYTVLENVNLTVNEGEFICVIGHSGCGKSTLLNMVSG-FASPT--DGSVQVGGKIITEPGPDRMVVFQNYALLPWLTALENVYIAVD-AVHSQKTEAEKRAIAKDHLAMVGLTDSMDKKPG-----QISGGMKQRVSIARALAIRPEVLILDEPFGALDA 189          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CBIO_METJA (Putative cobalt import ATP-binding protein cbiO OS=Methanocaldococcus jannaschii GN=cbiO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14
Identity = 61/213 (28.64%), Postives = 104/213 (48.83%), Query Frame = 3
Query:  153 QDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR-----KRALAYGTSA----YVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764
            +DL+   PDG      ++L+G+    + GE+++++GP+G GKSTL     G L       GE+LI G+     K++L          +   DD +       +  +    L LP    K + ++R +  +K +G++   N          LSGGQK+RV+I   +  +P+++ LDEPT+GLD   +  +M  +  L+++       TII S H
Sbjct:    7 KDLYFRYPDGT-----AVLKGINFKVKKGEMVSLLGPNGAGKSTLFLHFNGILRPTK---GEVLIKGKPIKYDKKSLVEVRKTVGLVFQNPDDQIFAPTVKEDVAFGPLNLGLP----KEEVEKRVKEALKAVGMEGFENKP-----PHHLSGGQKKRVAIAGILAMQPEVIVLDEPTAGLDPVGASKIMKLLYDLNKK-----GMTIIISTH 197          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PSTB_TROWT (Phosphate import ATP-binding protein pstB OS=Tropheryma whipplei (strain Twist) GN=pstB PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14
Identity = 53/171 (30.99%), Postives = 91/171 (53.22%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDAL--AGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALI-------TTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            G + A++GPSGCGKSTLL  L     L    +  G++L++GR   L      YV Q+  +I        T+++ E V    +L     + ++Q+ E  E  ++ + L D ++ R+G  G + LSGGQ++R+ I   +   P+++ +DEP S LD  ++  +   I KL ++
Sbjct:   30 GSVTALIGPSGCGKSTLLRTLNRMHELSPGAKVKGQVLLDGRD--LYQLDPVYVRQEVGMIFQRPNPFPTMSIRENVLAGIKLNRK-RIHRIQQNELMERCLRSVNLWDEVHNRLGRPGGE-LSGGQQQRLCIARAIAVSPRVILMDEPCSALDPVSTKAIEQLICKLKEK 196          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: METN_CHLCV (Methionine import ATP-binding protein metN OS=Chlamydophila caviae GN=metN PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14
Identity = 60/182 (32.97%), Postives = 93/182 (51.10%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLL---DALAGRLGSNTRQAGEILINGRKR--ALAYGTS-AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            GN  IL  ++    PGE+  I+G SG GKSTLL   D L      +   AG   ++  K    LA+    AY++Q   L +  TV E + Y  +L  PD MTK   +E+ +  +  + L +  +          LSGGQK++V+I I +++ P +L  DE TS LD  ++  V  ++ KL++
Sbjct:   19 GNHRILNDISFSVFPGEIFGIIGHSGSGKSTLLRCLDFLVSPTSGSISVAGFHNLHSDKTNSRLAFAKRVAYISQSCGLFSAKTVFENIVYPLKLHYPD-MTKSLIEEKVDNALDFLNLYERKHAY-----PSRLSGGQKQKVAIAIAIVSDPVVLLCDEITSALDPRSTEDVTDKLLKLNE 194          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD_HAEIN (Lipoprotein-releasing system ATP-binding protein lolD OS=Haemophilus influenzae GN=lolD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14
Identity = 58/184 (31.52%), Postives = 87/184 (47.28%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK---------RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH 728
            +L+G++    P EL+AI+G SG GKSTLL  L G    +   +GE+ ING+           AL      +V Q   L+   T  E V       L     K + K+RAE  +  +GL   +  R        LSGG+++RV+I   ++  P L+  DEPT  LD   +  +   I +L+Q  +
Sbjct:   24 VLKGVSFSMEPAELVAIVGSSGSGKSTLLHTLGGL---DQPSSGEVFINGQSLQKASANELAALRNRYLGFVYQFHHLMADFTALENVMMP---MLIGHQNKTEAKDRAEKMLSAVGLSHRITHR-----PSALSGGERQRVAIARALVNNPSLVLADEPTGNLDHKTTESIFELIQQLNQEQN 196          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD_HAEI8 (Lipoprotein-releasing system ATP-binding protein lolD OS=Haemophilus influenzae (strain 86-028NP) GN=lolD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14
Identity = 58/184 (31.52%), Postives = 87/184 (47.28%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK---------RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH 728
            +L+G++    P EL+AI+G SG GKSTLL  L G    +   +GE+ ING+           AL      +V Q   L+   T  E V       L     K + K+RAE  +  +GL   +  R        LSGG+++RV+I   ++  P L+  DEPT  LD   +  +   I +L+Q  +
Sbjct:   24 VLKGVSFSMEPAELVAIVGSSGSGKSTLLHTLGGL---DQPSSGEVFINGQSLQKASANELAALRNRYLGFVYQFHHLMADFTALENVMMP---MLIGHQNKTEAKDRAEKMLSAVGLSHRITHR-----PSALSGGERQRVAIARALVNNPSLVLADEPTGNLDHKTTESIFELIQQLNQEQN 196          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CMPD_SYNP6 (Bicarbonate transport ATP-binding protein cmpD OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=cmpD PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14
Identity = 53/175 (30.29%), Postives = 88/175 (50.29%), Query Frame = 3
Query:  189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713
            KG  ++L G+    + GE + ++G SGCGKSTLL+ ++   G N    G + + G++          V Q+ AL+  +T  E VY +     P  M + +K+E     +  +GL +A   +I       +SGG K+RV+I   +  RP++L LDEP   LD+     +   + K+
Sbjct:   34 KGPYTVLDGVNLTVQEGEFICVIGHSGCGKSTLLNMVS---GFNQPSHGSVRLKGKEIDRPGPDRMVVFQNYALLPWMTAYENVYLAVDCVNPQ-MREGEKREIVREHLAMVGLTEAAEKKI-----TQISGGMKQRVAIARALSIRPEVLILDEPFGALDAITKEELQEELLKI 199          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CMPD_SYNE7 (Bicarbonate transport ATP-binding protein cmpD OS=Synechococcus elongatus (strain PCC 7942) GN=cmpD PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14
Identity = 53/175 (30.29%), Postives = 88/175 (50.29%), Query Frame = 3
Query:  189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713
            KG  ++L G+    + GE + ++G SGCGKSTLL+ ++   G N    G + + G++          V Q+ AL+  +T  E VY +     P  M + +K+E     +  +GL +A   +I       +SGG K+RV+I   +  RP++L LDEP   LD+     +   + K+
Sbjct:   34 KGPYTVLDGVNLTVQEGEFICVIGHSGCGKSTLLNMVS---GFNQPSHGSVRLKGKEIDRPGPDRMVVFQNYALLPWMTAYENVYLAVDCVNPQ-MREGEKREIVREHLAMVGLTEAAEKKI-----TQISGGMKQRVAIARALSIRPEVLILDEPFGALDAITKEELQEELLKI 199          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AUS1_YEAST (ATP-dependent permease AUS1 OS=Saccharomyces cerevisiae GN=AUS1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14
Identity = 72/267 (26.97%), Postives = 126/267 (47.19%), Query Frame = 3
Query:    9 SMSSLDHSIPVPAISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLL-FLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782
            S SS   ++P        E+  +  N +  T ++   +       ++W+++  TV      G + ++   +G+   G L A+MG SG GK+TLL+ L+ R+ +    +GEILI+G         KR++ +     V Q D  +  L+V E++  S  L+       L           ++ + D             L+  Q++ +SI +E++T+P LL FLDEPTSGLD+ A+  ++  + +L      +  + I  +IHQPS  V
Sbjct:  711 SSSSSLSAVPYQISPSNKEMALNDYNEQPITETVETQKH-----IISWKNINYTV------GTKKLINNASGFISSG-LTALMGESGAGKTTLLNVLSQRVETGV-VSGEILIDGHPLTDEDAFKRSIGF-----VQQQDLHLDLLSVKESLEISCLLRGDGDRAYLDTVSNLLKLPSDILVAD-------------LNPTQRKLLSIGVELVTKPSLLLFLDEPTSGLDAEAALTIVKFLKQL-----SLQGQAIFCTIHQPSKSV 941          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCAC_HUMAN (ATP-binding cassette sub-family A member 12 OS=Homo sapiens GN=ABCA12 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14
Identity = 55/180 (30.56%), Postives = 90/180 (50.00%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT----SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764
            G + +++GP+G GK+T +  L G  G++   AG I + G+       T         Q D L + LT  E +     +++P   TK Q  E  + T+K+ GL    + R+G      LSGG KR++SI I ++   +++ LDEP++G+D  +   +   I+K         +RTII S H
Sbjct: 1371 GHITSLLGPNGAGKTTTISMLTGLFGAS---AGTIFVYGKDIKTDLHTVRKNMGVCMQHDVLFSYLTTKEHLLLYGSIKVPH-WTKKQLHEEVKRTLKDTGLYSHRHKRVGT-----LSGGMKRKLSISIALIGGSRVVILDEPSTGVDPCSRRSIWDVISK------NKTARTIILSTH 1535          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CMPD_SYNY33.431e-1431.37Bicarbonate transport ATP-binding protein cmpD OS=... [more]
CBIO_METJA3.431e-1428.64Putative cobalt import ATP-binding protein cbiO OS... [more]
PSTB_TROWT4.481e-1430.99Phosphate import ATP-binding protein pstB OS=Troph... [more]
METN_CHLCV4.481e-1432.97Methionine import ATP-binding protein metN OS=Chla... [more]
LOLD_HAEIN4.481e-1431.52Lipoprotein-releasing system ATP-binding protein l... [more]
LOLD_HAEI84.481e-1431.52Lipoprotein-releasing system ATP-binding protein l... [more]
CMPD_SYNP64.481e-1430.29Bicarbonate transport ATP-binding protein cmpD OS=... [more]
CMPD_SYNE74.481e-1430.29Bicarbonate transport ATP-binding protein cmpD OS=... [more]
AUS1_YEAST4.481e-1426.97ATP-dependent permease AUS1 OS=Saccharomyces cerev... [more]
ABCAC_HUMAN4.481e-1430.56ATP-binding cassette sub-family A member 12 OS=Hom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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