CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: UGPC_BORA1 (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Bordetella avium (strain 197N) GN=ugpC PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.852e-14 Identity = 58/182 (31.87%), Postives = 95/182 (52.20%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH 728 GN ++ G+ + GE + I+GPSGCGKSTL+ +A G T +GEILI+ + A A V Q+ AL ++V E + Y +++ + K + ++R E + + L ++ R + LSGGQ++RV++ ++ PK+ DEP S LD+ + I KL +R H Sbjct: 15 GNVPVIHGIDMEIKDGEFIVIVGPSGCGKSTLMRMVA---GLETVTSGEILIDDKPVNDLEPAERDIAMVFQNYALYPHMSVFENMAYGLKIR---KVPKAEIQKRVEEAAQILELGKLLDRR-----PRQLSGGQRQRVAMGRAIVREPKVFLFDEPLSNLDAKLRVAMRLEILKLHRRLH 185
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: UGPC1_RHIL3 (sn-glycerol-3-phosphate import ATP-binding protein ugpC 1 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ugpC1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.852e-14 Identity = 59/186 (31.72%), Postives = 95/186 (51.08%), Query Frame = 3 Query: 180 GQKK--GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 G KK G ++ G+ + GE + I+GPSGCGKSTLL +A G GEI I+GR + A V Q+ AL ++V+E + Y+ ++ ++K +++ R K + L+ + R LSGGQ++RV++ M+ PK+ DEP S LD+ + + I +L +R Sbjct: 8 GVKKNYGKTPVVHGVDLDIQSGEFIVILGPSGCGKSTLLRMIA---GLEEITGGEIAIDGRVVNQLEPRERGCAMVFQNYALYPHMSVAENIGYALKVA---GVSKAERQRRIGEVAKALSLEPFLERR-----PAALSGGQRQRVAMGRAMIREPKVFLFDEPLSNLDAKLRIAMRAEIRRLHRR 182
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MDR3_HUMAN (Multidrug resistance protein 3 OS=Homo sapiens GN=ABCB4 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.852e-14 Identity = 73/246 (29.67%), Postives = 119/246 (48.37%), Query Frame = 3 Query: 60 FEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKST-------LLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 F+++++ N K + S ++ D L + D+ + P + N IL+GL + G+ +A++G SGCGKST L D G + + + +N + + V+Q+ L +T T++E + Y D + K K+ A I M L +T +G GA+ LSGGQK+R++I ++ PK+L LDE TS LD+ + V A LD+ G RT I H+ S+ Sbjct: 368 FDIIDN--NPKIDSFSERGHKPDSIKGNLEFNDVHFSYPS---RANVKILKGLNLKVQSGQTVALVGSSGCGKSTTVQLIQRLYDPDEGTINIDGQDIRNFNVNYLREIIGV-----VSQEPVLFST-TIAENICYGRGNVTMDEIKKAVKEANAYEFI--MKLPQKFDTLVGERGAQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQ---AALDKAREG---RTTIVIAHRLST 593 HSP 2 Score: 68.1662 bits (165), Expect = 6.056e-11 Identity = 59/209 (28.23%), Postives = 104/209 (49.76%), Query Frame = 3 Query: 189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLL-------DALAGRLGSNTRQAGEILINGR--KRALAYGTSAY--VTQDDALITTLTVSEAVYY--SAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 + N +LQGL+ + G+ LA++G SGCGKST++ D LAG + + G L++G+ K+ A + + ++ +++E + Y ++++ D + K I+ L TR+G G + LSGGQK+R++I ++ +P++L LDE TS LD+ + V + K + RT I H+ S+ Sbjct: 1046 RANVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGTVFVDF---GFQLLDGQEAKKLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSQDEIVSAAKAANIHPFIET--LPHKYETRVGDKGTQ-LSGGQKQRIAIARALIRQPQILLLDEATSALDTESEKVVQEALDKARE------GRTCIVIAHRLST 1242
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCGK_DICDI (ABC transporter G family member 20 OS=Dictyostelium discoideum GN=abcG20 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.852e-14 Identity = 62/196 (31.63%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSA----YVTQDDALITTLTVSEAV-YYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 GN ++ L + G + ++G SG GK+T+L + GRL +GE+L+ G++ G + Q+ AL LT+ + ++S Q+P + +K E IK + L + +G LSGGQK+RVS+ + +L PKLL LDEPT G+D + + S + L + GV TII + H Sbjct: 25 GNTKVIDNLNLQIKSGTINCLIGASGSGKTTILRTILGRL---IPDSGEVLVFGKRPHDIGGVPGSICGFCPQEGALYYDLTLDHTLNFFSNVHQIPKDKFESKKNE----IIKLLDLPQINSRSVGL-----LSGGQKKRVSLAVALLHSPKLLILDEPTVGIDMEVASNIWSYLRSL--ANSGV---TIIITTH 203
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y2641_BACAN (Putative ABC transporter ATP-binding protein BA_2641/GBAA_2641/BAS2461 OS=Bacillus anthracis GN=BA_2641 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14 Identity = 72/237 (30.38%), Postives = 110/237 (46.41%), Query Frame = 3 Query: 81 SNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKK--------------GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQD-DALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 SNN N++++ GV W + D K + L+ + GE++A++G +G GKSTL +L +G N + ILI+G RKR +YV Q+ + +IT TV E V ++ +L+ ++K + K RAE +K GL N W + LS GQK+R++I + PKL+ LDEPT+G D MS I KL ++ Sbjct: 260 SNNDVIYPLENLHKESISGVIKEWMEKKAFCKDTPTKKELLKVENLSFSYPNKQKALENVNLSIYEGEIVALLGHNGAGKSTLAHSL---IGINKTKNSRILIDGVNINSWSIRKRGEII---SYVMQNPNHMITQSTVIEEVSFTLKLK---KVSKEEIKFRAEEALKICGLYPFRN-----WPIQALSYGQKKRLTIASVLTANPKLIILDEPTAGQDYYHYKQFMSFIRKLAKK 482
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_ROSDO (Taurine import ATP-binding protein tauB OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=tauB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14 Identity = 51/169 (30.18%), Postives = 87/169 (51.48%), Query Frame = 3 Query: 207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 LQ ++ + GELL+++GPSGCGK+TLL+ +AG L +GE+++NG + V Q AL ++V E V + ++ K+ K + + + +GLQD + LSGG ++RV++ + P ++ +DEP LD+ + S + KL Sbjct: 24 LQDVSLDLKAGELLSVLGPSGCGKTTLLNIVAGFLAPT---SGELILNGHRITGPDAERGMVFQQGALFEWMSVRENVAFGPSMK---GTPKVDKDKTVDHLLDVVGLQDFKEKAV-----YELSGGMQQRVALARCLANDPDVILMDEPLGALDALTREKMQSLVLKL 181
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB2_BACSK (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Bacillus clausii (strain KSM-K16) GN=ssuB2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14 Identity = 56/174 (32.18%), Postives = 87/174 (50.00%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 G +++LQG+ GE +A++G SGCGKSTLL +A G T +GE+ NG + + + QD L+ V V +L+ + + +A +K++GL N W A LSGGQK+RV++ + + PKLL LDEP LD+ + + +L Sbjct: 21 GKKNVLQGIDATIHGGEFVAVVGKSGCGKSTLLRHVA---GLETATSGEVRQNGERIDGINQQACLMFQDSRLLPWQNVLTNVGVGLRLE-------GEWQRQAAALLKDVGLDGRGN----DWPAV-LSGGQKQRVALARALASGPKLLLLDEPLGALDALTRMEMQQLVERL 179
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_PSEAB (Spermidine/putrescine import ATP-binding protein potA OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=potA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14 Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSA---YVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734 GE ++GPSGCGK+TLL LAG + +GEI +NG+ A V Q AL ++V++ + + ++ + K + R E +K++ L D GG LSGGQ++RV+I ++ RP+LL LDEP S LD+ + + L Q+D G+ Sbjct: 31 GEFFTLLGPSGCGKTTLLRMLAG---FDQPDSGEIRLNGQDLAGVEPEKRPVHTVFQSYALFPHMSVAQNIAFPLKMA---GVAKSEIDARVEQALKDVRLADK-----GGRMPTQLSGGQRQRVAIARALVNRPRLLLLDEPLSALDAKLREEMQIELINL-QKDVGI 187
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA2_PSEAE (Spermidine/putrescine import ATP-binding protein potA 2 OS=Pseudomonas aeruginosa GN=potA2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14 Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSA---YVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734 GE ++GPSGCGK+TLL LAG + +GEI +NG+ A V Q AL ++V++ + + ++ + K + R E +K++ L D GG LSGGQ++RV+I ++ RP+LL LDEP S LD+ + + L Q+D G+ Sbjct: 31 GEFFTLLGPSGCGKTTLLRMLAG---FDQPDSGEIRLNGQDLAGVEPEKRPVHTVFQSYALFPHMSVAQNIAFPLKMA---GVAKSEIDARVEQALKDVRLADK-----GGRMPTQLSGGQRQRVAIARALVNRPRLLLLDEPLSALDAKLREEMQIELINL-QKDVGI 187
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNT_SALTI (Putative 2-aminoethylphosphonate import ATP-binding protein phnT OS=Salmonella typhi GN=phnT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14 Identity = 63/178 (35.39%), Postives = 91/178 (51.12%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 +L+ L+ PGE+LA++GPSG GK+T+L A+AG + G ILI KR LA V Q+ AL L V + V + + Q K ER +K +G+ D TR LSGGQ++RV+I + RP++L LDEP S LD+ + ++ IA+L Sbjct: 33 VLKPLSLTIEPGEVLALIGPSGSGKTTVLRAVAGFVQP---AGGRILIGDTDVTHLPPYKRGLAM-----VVQNYALFPHLKVEDNVAFGLRAQ---KQPKALINERVTQALKTVGMSDYA-TRY----PHQLSGGQQQRVAIARAIAVRPRVLLLDEPLSALDAQIRHNMVEEIARL 194 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |