CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: BCEA_BACHD (Bacitracin export ATP-binding protein bceA OS=Bacillus halodurans GN=bceA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13 Identity = 60/211 (28.44%), Postives = 104/211 (49.29%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAG--RLGSN---------TRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKK---ERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770 G K + +L+G+ GE ++IMG SG GK+TLL+ L+ +L + TR + L RK+ L + + Q+ L+ TLTV E + LP ++TK+ +K E+ + E+G+ + + +SGGQK+R S + P ++F DEPT LDS ++ ++ ++ +L+++ TI+ H P Sbjct: 14 GTKLNKQEVLKGIDIRVEKGEFVSIMGASGSGKTTLLNVLSSIDKLSNGSIKIEGSEMTRLKEKELAQFRKKHLGF-----IFQEYNLLDTLTVKENIL------LPLSITKIPRKAADEKFKQVATELGIYEIKDKY-----PNEISGGQKQRASAARAFIHEPSIIFADEPTGALDSKSASDLLGKLQQLNEKLRA----TIVMVTHDP 204
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCA2_DICDI (ABC transporter A family member 2 OS=Dictyostelium discoideum GN=abcA2 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13 Identity = 64/219 (29.22%), Postives = 102/219 (46.58%), Query Frame = 3 Query: 72 ESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK----RALAYGTSAYVTQDDALITTLTVSEAV-YYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 E S T ++V +D L +++L P K ++ + T G+ ++G +G GK+T + L G + +GE+ ING R A ++ Q DALIT L+ E + Y A +P+ K E E IK M L N+ GG+ SGG KR+ S+ I ML P ++ LDEP++G D+ Y+ + +++L Sbjct: 1272 EDSDVTAERTRLLSVGPNDEP---LQFRNLHKLFPAVGKAAPKAAVYNSTLSIPKGQTFGLLGLNGAGKTTTIAMLCGDI---VPSSGEVTINGHDLITDRGQALRSNGLCPQFDALITLLSAREQLTLYCAIKGVPEDKVK----EVVEAFIKMMDLGAIANSNTGGY-----SGGNKRKTSLSIAMLGNPSIVSLDEPSTGCDAVVRKYIWNVVSEL 1475
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB13B_ARATH (ABC transporter B family member 13 OS=Arabidopsis thaliana GN=ABCB13 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13 Identity = 61/196 (31.12%), Postives = 97/196 (49.49%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR-----KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 + + L+ R G+ A +GPSG GKST++ + N+ GEIL++G K V+Q+ AL T T++ + + D + + K A+ IK L + NT++G G + LSGGQK+R++I +L PK+L LDE TS LD+ + V + D+ + RT I H+ S+ Sbjct: 388 VFENLSFTIRSGKTFAFVGPSGSGKSTIISMVQRFYEPNS---GEILLDGNDIKSLKLKWFREQLGLVSQEPALFAT-TIASNILLGKENANMDQIIEAAKAANADSFIKS--LPNGYNTQVGEGGTQ-LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQAL------DNVMEKRTTIVVAHRLST 570
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_RHOFD (Aliphatic sulfonates import ATP-binding protein ssuB OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=ssuB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13 Identity = 55/161 (34.16%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674 G R +L+ PG+ +AI+G SGCGKSTLL +A G T AG I +N + + + QD L+ + + V L LP ++ A + ++GL D R W A+ LSGGQ++RVS+ ++ +P+LL LDEP LD+ Sbjct: 25 GAREVLRNTQLRVEPGQFIAIVGRSGCGKSTLLRLVA---GLETASAGSITVNDKLLTGLSDDTRIMFQDARLLPWKRIIDNV----ALGLPK-----DRRAEALKVLDQVGLAD----RANDWPAR-LSGGQRQRVSLARALVHKPRLLLLDEPLGALDA 168
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_RALEJ (Aliphatic sulfonates import ATP-binding protein ssuB OS=Ralstonia eutropha (strain JMP134) GN=ssuB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13 Identity = 58/175 (33.14%), Postives = 86/175 (49.14%), Query Frame = 3 Query: 198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 R +L + A PGE +AI+G SGCGKSTLL +A G G I ++ + + QD L+ V E V L LP +++E A + ++GL+D R W A+ LSGGQ++RV++ ++ P+LL LDEP LD+ + I L +R Sbjct: 48 REVLHRIELTAAPGEFVAIVGRSGCGKSTLLRLVA---GLECADEGAITLDAQPARTLQQDIRVMFQDSRLLPWKRVLENV----ALGLP-----RERREEAAAVLAQVGLRD----RADAWPAR-LSGGQRQRVALARSLVHHPRLLLLDEPLGALDALTRIEMQGLIESLWRR 205
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_PSEPU (Aliphatic sulfonates import ATP-binding protein ssuB OS=Pseudomonas putida GN=ssuB PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13 Identity = 63/197 (31.98%), Postives = 93/197 (47.21%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782 G R +L+G+ + G+ +AI+G SGCGKSTLL LA G + AG++L A + + QD L+ V + V + RA ++ +GL D N W A LSGGQK+RV++ ++ +P+LL LDEP LD+ + I +L R HG T++ H S V Sbjct: 27 GQREVLKGIELHIPAGQFVAIVGRSGCGKSTLLRLLA---GLDQPTAGQLLAGAAPLEQAREETRLMFQDARLLPWKKVIDNVGLGLSGDW---------RPRALEALESVGLADRANE----WPA-ALSGGQKQRVALARALIHQPRLLLLDEPLGALDALTRIEMQQLIERL-WRQHGF---TVLLVTHDVSEAV 202
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_BACCZ (Aliphatic sulfonates import ATP-binding protein ssuB OS=Bacillus cereus (strain ZK / E33L) GN=ssuB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13 Identity = 52/164 (31.71%), Postives = 83/164 (50.61%), Query Frame = 3 Query: 183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674 ++ G +L+ + G+ + ++GPSGCGKSTLL +A G + GEI+I+G + ++ Q+ L LTV E + +A L L D K + KE E+ ++ G + + K +SGG +RV+I +L P +L LDEP LD+ Sbjct: 14 KQTGTVQVLENINFQLEKGDFVTVIGPSGCGKSTLLKIIA---GLDNDFEGEIIIDGERITKPSKKQGFIFQEHRLFPWLTVEENI--AADLSLKDKYVKDKVKEWVEI-VRLDGFEKSY--------PKEISGGMSQRVAIARALLRDPNVLLLDEPFGALDA 163
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_LACBA (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=potA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13 Identity = 55/183 (30.05%), Postives = 89/183 (48.63%), Query Frame = 3 Query: 183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVT---QDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 ++ + +IL + G+ ++GPSGCGK+T+L +AG + T G+IL G++ V QD AL +TV+E V + LQ K + ER ++ + L D G LSGGQ++R++I ++ +P++L LDEP S LD+ + + L QR Sbjct: 13 KRYADNTILSNINLTLESGKFYTLLGPSGCGKTTILRTIAGFTDATT---GDILFAGKRINDVPANKRNVNTVFQDYALFPHMTVAENVAFGLTLQ---KRPKSEIAERVNQALRLVQLAD-----YGDRAISALSGGQQQRIAIARAIVMQPQVLLLDEPLSALDAKLRRQMQYELRDLQQR 184
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_SHIDS (Phosphonates import ATP-binding protein phnC OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=phnC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13 Identity = 58/195 (29.74%), Postives = 98/195 (50.26%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGR-------------LGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 GE++A++GPSG GKSTLL L+G LG +Q G + + RK + + Y+ Q L+ L+V E V A P T ++K+RA + +G+ + R+ LSGGQ++RV+I ++ + K++ DEP + LD ++ VM + ++Q D G+ T++ ++HQ Sbjct: 30 GEMVALLGPSGSGKSTLLRHLSGLIVGDKKPECRVELLGCTVQQNGRLARDIRK---SRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GI---TVVVTLHQ 212
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC2_SYNJB (Phosphonates import ATP-binding protein phnC 2 OS=Synechococcus sp. GN=phnC2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13 Identity = 70/208 (33.65%), Postives = 106/208 (50.96%), Query Frame = 3 Query: 207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKK------ERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ-PSSEVF 785 L+G+T G+++A++GPSG GKSTLL + RL T +G I +NG R+ A + Q+ AL+ LTV E V S QL + +K + A + +GL D + R A LSGGQ++RV I +L P+LL +DEPT+ LD S +M I +L + G+ ++I +IH P +++F Sbjct: 18 LKGVTLEVPDGQVMALIGPSGAGKSTLLRCI-NRLVEPT--SGSIWLNGIDLTRLNTRELRQARRKIGMIFQEYALVERLTVMENVL-SGQLGYVNFWQSWFRKFPQATIDEAFRLLDRVGLSDFPDKR-----ADALSGGQRQRVGIARALLQNPELLLVDEPTASLDPKTSRQIMRLINEL-ASERGL---SVIINIHDVPLAQMF 212 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |