CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MDR2_CRIGR (Multidrug resistance protein 2 OS=Cricetulus griseus GN=PGY2 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13
Identity = 83/266 (31.20%), Postives = 132/266 (49.62%), Query Frame = 3
Query:    6 FSMSSLDHSIPVPAISR--AFEVVESSSNNKTATHSINVNEDDGDGVF--LTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING---RKRALAYGTS--AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            FS+  +  +I V A +R  A+E+ +   +N+ +  S +      D V   L ++++  + P    +    IL+GL    + G+ +A++G SGCGKST +  L  RL   T   G + I+G   R   + Y       V+Q+  L  T T++E + Y  +    D + K  K+  A   I  M L    +T +G  GA+ LSGGQK+R++I   ++  PK+L LDE TS LD+ +   V    A LD+   G   RT I   H+ S+
Sbjct:  342 FSIGHIAPNIEVFANARGAAYEIFKII-DNEPSIDSFSTQGHKPDSVMGNLEFKNVHFSYPS---RSGIKILKGLNLKVQSGQTVALVGKSGCGKSTTVQLLQ-RLYDPTE--GVVSIDGQDIRTINVRYLREIIGVVSQEPVLFAT-TIAENIRYGRENVTMDEIEKAVKEANAYDFI--MKLPHKFDTLVGERGAQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQ---AALDKAREG---RTTIVIAHRLST 590          

HSP 2 Score: 76.6406 bits (187), Expect = 1.703e-13
Identity = 57/197 (28.93%), Postives = 102/197 (51.78%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAY--VTQDDALITTLTVSEAVYY--SAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            +LQGL+   + G+ LA++G SGCGKST++  L          AG + ++G+  K+       A+  +   + ++   +++E + Y  ++++   D + +  K+      I+   L D  NTR+G  G + LSGGQK+R++I   ++ +P +L LDE TS LD+ +   V   + K  +       RT I   H+ S+
Sbjct: 1050 VLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDP---MAGTVFLDGKEIKQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVVSQDEIERAAKEANIHQFIES--LPDKYNTRVGDKGTQ-LSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKARE------GRTCIVIAHRLST 1234          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAAR (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus aureus (strain MRSA252) GN=hrtA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13
Identity = 57/194 (29.38%), Postives = 90/194 (46.39%), Query Frame = 3
Query:  180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737
            G+      +L+G+      GE + + G SG GK+TLL  L G L   ++ +G +L N         R   L      ++ Q   L+  L V E +    Q      MTK Q  +RA   +K +GL+D +N          LSGG+K+RV+I    +  PK++  DEPT+ LD+  +  V+  I +  +    +G
Sbjct:   13 GEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLL---SQTSGTVLYNDAPLFDKQHRSSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQ---EAGMTKQQSSKRAIQLLKNIGLEDRLNVY-----PHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKVVEMIRQQIKEQQMIG 195          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA_CHLVU (Probable sulfate/thiosulfate import ATP-binding protein cysA OS=Chlorella vulgaris GN=cysA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13
Identity = 57/165 (34.55%), Postives = 86/165 (52.12%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            G L+ ++GPSG GKSTLL  LAG        +G I + G+   +  L      +V Q+ AL   LTVSE V +  ++Q  D+   L KK+R    +K M L+     + G      LSGGQ++RV++   +   PK+L LDEP + LD+     + S + +L  +
Sbjct:   28 GSLVGLLGPSGSGKSTLLRVLAGL---EKPDSGRIWLEGQDATQMKLQDREIGFVFQNYALFPHLTVSENVAFGLEIQKIDS---LLKKKRVNELLKLMQLE-----KFGDSYPNQLSGGQRQRVALARALAMEPKVLLLDEPFAALDAKIRKQLRSWLRELHHK 181          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y696_RICPR (Putative export ATP-binding/permease protein RP696 OS=Rickettsia prowazekii GN=RP696 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 64/253 (25.30%), Postives = 123/253 (48.62%), Query Frame = 3
Query:   33 IPVPAISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS-----AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            +P  A+ R   +++ +S      +++N    + D + + ++++  T      + N  ++  ++      + + I+G SG GKSTL+  L   L    ++ G ILIN +  +    T      AYV Q+ ++ +    S  ++ + +    +    ++     E + K   L D +NT+IG  G + LSGGQK+R++I   +L +PK+L LDE  S LD+ +   +++ I K+      +    II+  H+ SS
Sbjct:  303 LPTTALERIITIIDKTSIVHNNYYALN----NSDAISIEFKNVDFTY---NSRPNLKVINNMSLKINSNKFVGIVGRSGAGKSTLIQLL---LRFYRQENGTILINNQDISFVKPTDIRKFIAYVPQEASIFSDTIKSNIIFGNNKASDYEINEIIKITGIEEFSTK---LHDGINTKIGEKGVR-LSGGQKQRIAIARALLRKPKILLLDEAMSALDTMSEQKLLNAIKKI------MKGNIIISIAHRISS 535          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: TAUB_PARPN (Taurine import ATP-binding protein tauB OS=Paracoccus pantotrophus GN=tauB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 57/189 (30.16%), Postives = 92/189 (48.68%), Query Frame = 3
Query:  156 DLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            D+ +  P   K    + L+G+    + G+ +  +G SGCGK+TLL+ +AG +  +   AG+I +  R  A        V Q  AL+  L V + V +  +LQ  D  T   ++ERA   +  +GLQD     I       LSGG ++RV I   +   P +L +DEP + LD+     V   + ++ Q+
Sbjct:    8 DVSLIYPGHHKGAPVTALKGVNLEVKSGDFVVALGASGCGKTTLLNLMAGFMAPS---AGQITLGDRPVAGPGAERGVVFQKHALLPWLNVIDNVEFGLKLQGVDART---RRERAVKNLALVGLQDFHKHMI-----YHLSGGMQQRVGIARALTCDPAMLLMDEPMAALDALTRETVQELLLQIWQQ 185          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_BACHK (Aliphatic sulfonates import ATP-binding protein ssuB OS=Bacillus thuringiensis subsp. konkukian GN=ssuB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 52/164 (31.71%), Postives = 83/164 (50.61%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            ++ G   +L+ +      G+ + ++GPSGCGKSTLL  +A   G +    GEI+I+G +         ++ Q+  L   LTV E +  +A L L D   K + KE  E+ ++  G + +          K +SGG  +RV+I   +L  P +L LDEP   LD+
Sbjct:   14 KQTGTVQVLENINFQLEKGDFVTVIGPSGCGKSTLLKIVA---GLDNDFEGEIIIDGERITKPSKKQGFIFQEHRLFPWLTVEENI--AADLSLKDKYVKDKVKEWVEI-VRLDGFEKSY--------PKEISGGMSQRVAIARALLRDPSVLLLDEPFGALDA 163          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_BACC1 (Aliphatic sulfonates import ATP-binding protein ssuB OS=Bacillus cereus (strain ATCC 10987) GN=ssuB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 52/157 (33.12%), Postives = 80/157 (50.96%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            +L+ +      G+ + ++GPSGCGKSTLL  +AG  G      GEI+I+G +         ++ Q+  L   LTV E +  +A L L D   K + KE  E+ ++  G + +          K +SGG  +RV+I   +L  P +L LDEP   LD+
Sbjct:   21 VLENINFQLEKGDFVTVIGPSGCGKSTLLKIIAGLDG---EFEGEIIIDGERITKPSKKQGFIFQEHRLFPWLTVEENI--AADLSLKDKYVKDKVKEWVEI-VRLDGFEKSY--------PKEISGGMSQRVAIARALLRDPNVLLLDEPFGALDA 163          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_BACAN (Aliphatic sulfonates import ATP-binding protein ssuB OS=Bacillus anthracis GN=ssuB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 52/164 (31.71%), Postives = 83/164 (50.61%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            ++ G   +L+ +      G+ + ++GPSGCGKSTLL  +A   G +    GEI+I+G +         ++ Q+  L   LTV E +  +A L L D   K + KE  E+ ++  G + +          K +SGG  +RV+I   +L  P +L LDEP   LD+
Sbjct:   14 KQTGTVQVLENINFQLEKGDFVTVIGPSGCGKSTLLKIVA---GLDNDFEGEIIIDGERITKPSKKQGFIFQEHRLFPWLTVEENI--AADLSLKDKYVKDKVKEWVEI-VRLDGFEKSY--------PKEISGGMSQRVAIARALLRDPSVLLLDEPFGALDA 163          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_BACAH (Aliphatic sulfonates import ATP-binding protein ssuB OS=Bacillus thuringiensis (strain Al Hakam) GN=ssuB PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 52/164 (31.71%), Postives = 83/164 (50.61%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            ++ G   +L+ +      G+ + ++GPSGCGKSTLL  +A   G +    GEI+I+G +         ++ Q+  L   LTV E +  +A L L D   K + KE  E+ ++  G + +          K +SGG  +RV+I   +L  P +L LDEP   LD+
Sbjct:   14 KQTGTVQVLENINFQLEKGDFVTVIGPSGCGKSTLLKIVA---GLDNDFEGEIIIDGERITKPSKKQGFIFQEHRLFPWLTVEENI--AADLSLKDKYVKDKVKEWVEI-VRLDGFEKSY--------PKEISGGMSQRVAIARALLRDPSVLLLDEPFGALDA 163          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PSTB1_STRA5 (Phosphate import ATP-binding protein pstB 1 OS=Streptococcus agalactiae serotype V GN=pstB1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13
Identity = 55/175 (31.43%), Postives = 87/175 (49.71%), Query Frame = 3
Query:  234 PGELLAIMGPSGCGKSTLLDAL--AGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITT------LTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734
            P E+ A++GPSG GKSTLL A+   G L       G ++ NG         +  + ++  ++        ++V E V Y   L+L     K    E  E ++K   + D +  R+    A GLSGGQ++RV I   + T+PK++ LDEPTS LD  ++        K+++  HG+
Sbjct:   30 PNEITALIGPSGSGKSTLLRAINRMGDLNPEVTLTGAVMYNGHNVYSPRTDTVELRKEIGMVFQQPNPFPMSVFENVVYG--LRLKGIKDKATLDEAVETSLKGASIWDEVKDRLHD-SALGLSGGQQQRVCIARTLATKPKIILLDEPTSALDPISA-------GKIEETLHGL 194          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MDR2_CRIGR1.703e-1331.20Multidrug resistance protein 2 OS=Cricetulus grise... [more]
HRTA_STAAR1.703e-1329.38Putative hemin import ATP-binding protein hrtA OS=... [more]
CYSA_CHLVU1.703e-1334.55Probable sulfate/thiosulfate import ATP-binding pr... [more]
Y696_RICPR2.224e-1325.30Putative export ATP-binding/permease protein RP696... [more]
TAUB_PARPN2.224e-1330.16Taurine import ATP-binding protein tauB OS=Paracoc... [more]
SSUB_BACHK2.224e-1331.71Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB_BACC12.224e-1333.12Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB_BACAN2.224e-1331.71Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB_BACAH2.224e-1331.71Aliphatic sulfonates import ATP-binding protein ss... [more]
PSTB1_STRA52.224e-1331.43Phosphate import ATP-binding protein pstB 1 OS=Str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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