CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YTLC_BACSU (Uncharacterized ABC transporter ATP-binding protein ytlC OS=Bacillus subtilis GN=ytlC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.904e-13 Identity = 51/148 (34.46%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 228 ARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671 A G+ ++ +GPSGCGK+TLL +AG + + G +LI GR+ Y+ Q D L ++ E V L++ DT+T+ + K A + E GL D K LSGG ++R ++ + P LL LDEP S LD Sbjct: 30 AEKGDFISFLGPSGCGKTTLLSIIAGLIEPS---EGRVLIEGREPNQKEHNIGYMLQQDYLFPWKSIEENVLLG--LKIADTLTE-ESKAAALGLLPEFGLIDVEKKY-----PKELSGGMRQRAALARTLAPNPSLLLLDEPFSALD 166
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YKNY_BACSU (Uncharacterized ABC transporter ATP-binding protein yknY OS=Bacillus subtilis GN=yknY PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.904e-13 Identity = 61/187 (32.62%), Postives = 95/187 (50.80%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALA--GRLGSNTRQA-GEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLP---DTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770 GE ++IMGPSG GKST+++ + R S T Q GE + + + + LA + +V Q L+ L + V +LP + K +++ERAE ++++GL D M LSGGQK+RV+I ++ PKL+ DEPT LD+ S +M + L+ TI+ H+P Sbjct: 31 GEYVSIMGPSGSGKSTIMNIIGCLDRPTSGTYQLDGEDISSYKDKELAAVRNRSIGFVFQQFQLLPRLNAKKNV------ELPMIYSGIGKKERQERAERALEKVGLADRMLHM-----PNELSGGQKQRVAIARAIVNEPKLILADEPTGALDTKTSEAIMDQFTALNAE-----GTTIVLVTHEP 201
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y2655_BACCR (Putative ABC transporter ATP-binding protein BC_2655 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=BC_2655 PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.904e-13 Identity = 70/250 (28.00%), Postives = 110/250 (44.00%), Query Frame = 3 Query: 42 PAISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKK--------------GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQD-DALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 P A + + SNN N+ ++ V W + V + K + +L+ + GE++A++G +G GKSTL +L +G N + G+I + G RKR +YV Q+ + +IT TV E V ++ L +K + K + E +K GL N W + LS GQK+R++I + T PKL+ LDEPT+G D MS I L ++ Sbjct: 247 PIYIEALKRLHFDSNNDVIYPMENLQKEKVSNVIKEWMEKQVILKRNAKNKELLKVENLSFSYPNKQKVLENVNLLIYEGEIVALLGHNGAGKSTLAHSL---IGINKMKNGKIALKGEDISSWSIRKRGEII---SYVMQNPNHMITQPTVFEEVSFTLTLH---NFSKEEIKNKVEGILKICGLYPFRN-----WPIQALSYGQKKRLTIASVLTTNPKLIILDEPTAGQDYYHYKQFMSFIKNLAKK 482
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y2424_BACHK (Putative ABC transporter ATP-binding protein BT9727_2424 OS=Bacillus thuringiensis subsp. konkukian GN=BT9727_2424 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.904e-13 Identity = 62/171 (36.26%), Postives = 91/171 (53.22%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQD-DALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 GE++A++G +G GKSTL +L +G N + ILI+G RKR YV Q+ + +IT TV E V ++ +L+ ++K + K RAE +K GL N W + LS GQK+R++I + PKL+ LDEPT+G D MS I KL ++ Sbjct: 326 GEIVALLGHNGAGKSTLAHSL---IGINKTKNSRILIDGVNINSWSIRKRGEII---FYVMQNPNHMITQSTVIEEVSFTLKLK---KVSKEEIKFRAEEALKICGLYPFRN-----WPIQALSYGQKKRLTIASVLTANPKLIILDEPTAGQDYYHYKQFMSFIRKLAKK 482
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_LACSS (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=potA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.904e-13 Identity = 56/186 (30.11%), Postives = 92/186 (49.46%), Query Frame = 3 Query: 183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVT---QDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKG---LSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 +K + IL+G+ G+ ++GPSGCGK+T+L +AG +++ G++L G++ V QD AL L V + V + L+ K++K + + I+ + L R+GG+ + LSGGQ++RV+I + PK+L LDEP S LD + + L QR Sbjct: 13 KKYDDNQILKGIDMALEKGKFYTLLGPSGCGKTTILRIIAGFTNASS---GDVLFEGKRMNDLPANKRQVNTVFQDYALFPHLNVFDNVAFGLNLR------KVKKSDVEKKVIEALKL-----VRLGGYEHREISELSGGQQQRVAIARALANEPKVLLLDEPLSALDMKLRKAMQYELRDLQQR 184
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MSBA_RALEJ (Lipid A export ATP-binding/permease protein msbA OS=Ralstonia eutropha (strain JMP134) GN=msbA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.904e-13 Identity = 58/183 (31.69%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLL-------DALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKK-ERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 +G R L+G+ GE++A++GPSG GK+TL+ D GR+ + G+I + + + A+V+QD L TV+ V Y A+ + M ++++ + A +T L + +NT IG G K LSGGQ++R++I + +L LDE TS LDS + V + + L Sbjct: 358 EGTRPALEGIDIRVPAGEVVALVGPSGSGKTTLVNLVPRFFDPTDGRILLDGHAIGDIALRELRNQI-----AFVSQDVVLFND-TVAANVAYGARSEEEIDMARVERALQAAYLTEVVKNLPEGVNTNIGDNGMK-LSGGQRQRLAIARAIYKDAPILILDEATSALDSESERQVQAALEAL 533
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MDR3_MOUSE (Multidrug resistance protein 3 OS=Mus musculus GN=Abcb1a PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.904e-13 Identity = 65/198 (32.83%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKST-------LLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 IL+GL + G+ +A++G SGCGKST L D L G + + + I + + + V+Q+ L T T++E + Y + D + K K+ A I M L +T +G GA+ LSGGQK+R++I ++ PK+L LDE TS LD+ + V A LD+ G RT I H+ S+ Sbjct: 405 ILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGV-----VSQEPVLFAT-TIAENIRYGREDVTMDEIEKAVKEANAYDFI--MKLPHQFDTLVGERGAQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQ---AALDKAREG---RTTIVIAHRLST 587 HSP 2 Score: 75.0998 bits (183), Expect = 4.954e-13 Identity = 53/198 (26.77%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLL-------DALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 +LQGL+ + G+ LA++G SGCGKST++ D +AG + + ++ ++ + + L + + ++ +++E + Y ++ ++ + A + L D NTR+G G + LSGGQK+R++I ++ +P +L LDE TS LD+ + V + K + RT I H+ S+ Sbjct: 1048 VLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLG------IVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQ-LSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKARE------GRTCIVIAHRLST 1232
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYDC_ECOLI (ATP-binding/permease protein cydC OS=Escherichia coli (strain K12) GN=cydC PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.904e-13 Identity = 56/198 (28.28%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 132 DGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA----LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 D V LT +D+ T P+ ++ L+G++ GE +AI+G +GCGKSTLL L Q GEIL+N A A + V + + T+ + + ++ + ++++ ++ E +++ GL + G G + LSGG+ RR++I +L L+ LDEPT GLD+ ++ +A++ Sbjct: 335 DRVSLTLRDVQFTYPEQSQQA----LKGISLQVNAGEHIAILGRTGCGKSTLLQQLTRAWDP---QQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLEDAGLNSWL-----GEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEM 520
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCA5_DICDI (ABC transporter A family member 5 OS=Dictyostelium discoideum GN=abcA5 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.904e-13 Identity = 69/220 (31.36%), Postives = 100/220 (45.45%), Query Frame = 3 Query: 129 GDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK----RALAYGTSAYVTQDDALITTLTVSEAV-YYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773 G G L ++ L K N++ + T G+ ++G +G GK+T + LAG + +G+I ING RA A + Q DALIT LT E + Y A +PD L E IK M L N+ GG+ SGG KR+VS+ I ML P ++ +DE +SG D Y I++L + ++ II + H S Sbjct: 1317 GGGDMLQYKGLHKLFIGKGKNPNKNAVYNSTLGIPQGQTFGLLGLNGAGKTTTVSMLAGDI---LPTSGQITINGHDLVTDRAQALRGVSVCPQFDALITLLTAREQLSLYCAIKGVPDDKISLV----VEAFIKMMDLGKIANSNTGGY-----SGGNKRKVSLSIAMLGNPSVVLIDEASSGCDPIIRYRQCQVISELGK------NKVIILTSHSMS 1518
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_MYCCT (Spermidine/putrescine import ATP-binding protein potA OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=potA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13 Identity = 58/181 (32.04%), Postives = 94/181 (51.93%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA-LAYGTSAYVT--QDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMT-IKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734 +L+G++ + GE + ++GPSGCGK+T+L + G S +GEIL + + + T Q AL L V + V + ++ TK ER M I+++GL+ N +I LSGGQK+RV+I ++ +PK+L LDEP + LD + + +L Q+D G+ Sbjct: 20 VLKGISFNVKEGEFITLLGPSGCGKTTILKIIGG---SQKPNSGEILFEDKNLIPIPINKRQFNTIFQSYALFPHLNVFDNVAFGLTIK----KTKKDIIEREVMRQIRQVGLEGYENKKIDE-----LSGGQKQRVAIARALVMKPKVLLLDEPMAALDVKLRKTMQEELKRL-QQDIGI 187 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |