CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_SHISS (Phosphonates import ATP-binding protein phnC OS=Shigella sonnei (strain Ss046) GN=phnC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13 Identity = 57/195 (29.23%), Postives = 98/195 (50.26%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGR-------------LGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 GE++A++GPSG GKSTLL L+G LG ++ G + + RK + + Y+ Q L+ L+V E V A P T ++K+RA + +G+ + R+ LSGGQ++RV+I ++ + K++ DEP + LD ++ VM + ++Q D G+ T++ ++HQ Sbjct: 30 GEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRK---SRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GI---TVVVTLHQ 212
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_ECOL5 (Phosphonates import ATP-binding protein phnC OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=phnC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13 Identity = 57/195 (29.23%), Postives = 98/195 (50.26%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGR-------------LGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 GE++A++GPSG GKSTLL L+G LG ++ G + + RK + + Y+ Q L+ L+V E V A P T ++K+RA + +G+ + R+ LSGGQ++RV+I ++ + K++ DEP + LD ++ VM + ++Q D G+ T++ ++HQ Sbjct: 30 GEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRK---SRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GI---TVVVTLHQ 212
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC2_RHOPA (Phosphonates import ATP-binding protein phnC 2 OS=Rhodopseudomonas palustris GN=phnC2 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13 Identity = 64/205 (31.22%), Postives = 99/205 (48.29%), Query Frame = 3 Query: 186 KKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLG--SNTRQAGEILINGRKRAL--AYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQK-------KERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 ++G+R++L +T ++ AI+GPSG GK+T+L L G + S T EI + AL A +A + QD ALI L+ + V L L DT L ++RA + ++GL D R LSGG+++RV + ++ RPKLL DEP + +D A + + L R+ T+I +HQ Sbjct: 32 RRGHRTVLHDVTASFPTAKVTAIVGPSGVGKTTMLGLLNGLIAPASGTVSFSEIGLLTEPTALRAARHQTATIFQDHALIGRLSAIDNVL----LGLADTRHPLSPLPWPVAARQRAAKALDDVGLLDLATRRTAQ-----LSGGERQRVGVARALIRRPKLLLGDEPFASVDPALAQQLGGLFRSLAMRE----GLTVILVLHQ 223
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MDR1_MOUSE (Multidrug resistance protein 1 OS=Mus musculus GN=Abcb1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13 Identity = 65/198 (32.83%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKST-------LLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 IL+GL + G+ +A++G SGCGKST L D L G + + + I + + + V+Q+ L T T++E + Y + D + K K+ A I M L +T +G GA+ LSGGQK+R++I ++ PK+L LDE TS LD+ + V A LD+ G RT I H+ S+ Sbjct: 408 ILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLEGVVSIDGQDIRTINVRYLREIIGV-----VSQEPVLFAT-TIAENIRYGREDVTMDEIEKAVKEANAYDFI--MKLPHQFDTLVGERGAQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQ---AALDKAREG---RTTIVIAHRLST 590 HSP 2 Score: 75.0998 bits (183), Expect = 4.954e-13 Identity = 56/198 (28.28%), Postives = 98/198 (49.49%), Query Frame = 3 Query: 195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAY--VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 N +LQGL+ + G+ LA++G SGCGKST++ L AG + ++G+ K+ A+ + + ++ +++E + Y + ++ + A + L D NTR+G G + LSGGQK+R++I ++ +P +L LDE TS LD+ + V + K + RT I H+ S+ Sbjct: 1047 NIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDP---MAGSVFLDGKEIKQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRAVSHEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQ-LSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKARE------GRTCIVIAHRLST 1234
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_SYNFM (Macrolide export ATP-binding/permease protein macB OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=macB PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13 Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNT----RQAGEILIN---GRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773 +L+G++ PG+ +A+MG SG GK+TL++ L G L T R G+ +++ ++ AL +V Q+ L+ ++ E V ++ +ERA + MGL + ++ LSGGQ++RV+I ++ P LLF DEPT LDSA S V+ +L++ + GV TII H PS Sbjct: 22 VLRGISLKVSPGDFVALMGTSGSGKTTLMNIL-GCLDRPTSGHYRFDGQDVVDLTPDQRAALRNRKIGFVFQNFNLLPRMSAVENVMMPLSYA-GGGVSDQNGRERAGALLTRMGLGEHLDNE-----PSQLSGGQQQRVAIARALINNPSLLFADEPTGNLDSATSEEVLRVFQRLNE-EEGV---TIILVTHDPS 207
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_ALCBS (Macrolide export ATP-binding/permease protein macB OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=macB PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13 Identity = 62/186 (33.33%), Postives = 95/186 (51.08%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK-RALAYGTSA--------YVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734 +L G+ GE LAIMG SG GKSTL+ L G L + GE +G+ A+ + A +V Q LI T + E V A + + + ++K+RA+ + ++GL+D + R LSGGQ++RVSI ++ K++ DEPT LDSA+ VM ++ L ++ H V Sbjct: 22 VLHGIDLSIEAGEFLAIMGSSGSGKSTLMHIL-GCLDQPSD--GEYRFSGQPVTAMDHDQLAWLRREMFGFVFQSYHLIGTASAWENVALPA---IYAGVPREERKQRAQQLLTDLGLEDRLENR-----PSQLSGGQQQRVSIARALMNGGKVILADEPTGALDSASGEAVMDQLRSLAEQGHTV 196
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAAW (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus aureus (strain MW2) GN=hrtA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13 Identity = 57/194 (29.38%), Postives = 89/194 (45.88%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737 G+ +L+G+ GE + + G SG GK+TLL L G L ++ +G +L N R L ++ Q L+ L V E + Q MTK Q RA +K +GL+D +N LSGG+K+RV+I + PK++ DEPT+ LD+ + V+ I + + +G Sbjct: 13 GEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLL---SQTSGTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQ---EAGMTKQQSSTRAIQLLKNIGLEDRLNVY-----PHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKVVEMIRQQIKEQQMIG 195
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAAS (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus aureus (strain MSSA476) GN=hrtA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13 Identity = 57/194 (29.38%), Postives = 89/194 (45.88%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737 G+ +L+G+ GE + + G SG GK+TLL L G L ++ +G +L N R L ++ Q L+ L V E + Q MTK Q RA +K +GL+D +N LSGG+K+RV+I + PK++ DEPT+ LD+ + V+ I + + +G Sbjct: 13 GEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLL---SQTSGTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQ---EAGMTKQQSSTRAIQLLKNIGLEDRLNVY-----PHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKVVEMIRQQIKEQQMIG 195
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAAN (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus aureus (strain N315) GN=hrtA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13 Identity = 57/194 (29.38%), Postives = 89/194 (45.88%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737 G+ +L+G+ GE + + G SG GK+TLL L G L ++ +G +L N R L ++ Q L+ L V E + Q MTK Q RA +K +GL+D +N LSGG+K+RV+I + PK++ DEPT+ LD+ + V+ I + + +G Sbjct: 13 GEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLL---SQTSGTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQ---EAGMTKQQSSTRAIQLLKNIGLEDRLNVY-----PHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKVVEMIRQQIKEQQMIG 195
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAAM (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hrtA PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13 Identity = 57/194 (29.38%), Postives = 89/194 (45.88%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737 G+ +L+G+ GE + + G SG GK+TLL L G L ++ +G +L N R L ++ Q L+ L V E + Q MTK Q RA +K +GL+D +N LSGG+K+RV+I + PK++ DEPT+ LD+ + V+ I + + +G Sbjct: 13 GEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLL---SQTSGTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQ---EAGMTKQQSSTRAIQLLKNIGLEDRLNVY-----PHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKVVEMIRQQIKEQQMIG 195 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |