CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_SHISS (Phosphonates import ATP-binding protein phnC OS=Shigella sonnei (strain Ss046) GN=phnC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 57/195 (29.23%), Postives = 98/195 (50.26%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGR-------------LGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            GE++A++GPSG GKSTLL  L+G              LG   ++ G +  + RK   +   + Y+ Q   L+  L+V E V   A    P   T       ++K+RA   +  +G+    + R+       LSGGQ++RV+I   ++ + K++  DEP + LD  ++  VM  +  ++Q D G+   T++ ++HQ
Sbjct:   30 GEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRK---SRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GI---TVVVTLHQ 212          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_ECOL5 (Phosphonates import ATP-binding protein phnC OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=phnC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 57/195 (29.23%), Postives = 98/195 (50.26%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGR-------------LGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            GE++A++GPSG GKSTLL  L+G              LG   ++ G +  + RK   +   + Y+ Q   L+  L+V E V   A    P   T       ++K+RA   +  +G+    + R+       LSGGQ++RV+I   ++ + K++  DEP + LD  ++  VM  +  ++Q D G+   T++ ++HQ
Sbjct:   30 GEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRK---SRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GI---TVVVTLHQ 212          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC2_RHOPA (Phosphonates import ATP-binding protein phnC 2 OS=Rhodopseudomonas palustris GN=phnC2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 64/205 (31.22%), Postives = 99/205 (48.29%), Query Frame = 3
Query:  186 KKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLG--SNTRQAGEILINGRKRAL--AYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQK-------KERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            ++G+R++L  +T      ++ AI+GPSG GK+T+L  L G +   S T    EI +     AL  A   +A + QD ALI  L+  + V     L L DT   L         ++RA   + ++GL D    R        LSGG+++RV +   ++ RPKLL  DEP + +D A +  +      L  R+      T+I  +HQ
Sbjct:   32 RRGHRTVLHDVTASFPTAKVTAIVGPSGVGKTTMLGLLNGLIAPASGTVSFSEIGLLTEPTALRAARHQTATIFQDHALIGRLSAIDNVL----LGLADTRHPLSPLPWPVAARQRAAKALDDVGLLDLATRRTAQ-----LSGGERQRVGVARALIRRPKLLLGDEPFASVDPALAQQLGGLFRSLAMRE----GLTVILVLHQ 223          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MDR1_MOUSE (Multidrug resistance protein 1 OS=Mus musculus GN=Abcb1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 65/198 (32.83%), Postives = 99/198 (50.00%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKST-------LLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            IL+GL    + G+ +A++G SGCGKST       L D L G +  + +    I +   +  +       V+Q+  L  T T++E + Y  +    D + K  K+  A   I  M L    +T +G  GA+ LSGGQK+R++I   ++  PK+L LDE TS LD+ +   V    A LD+   G   RT I   H+ S+
Sbjct:  408 ILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLEGVVSIDGQDIRTINVRYLREIIGV-----VSQEPVLFAT-TIAENIRYGREDVTMDEIEKAVKEANAYDFI--MKLPHQFDTLVGERGAQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQ---AALDKAREG---RTTIVIAHRLST 590          

HSP 2 Score: 75.0998 bits (183), Expect = 4.954e-13
Identity = 56/198 (28.28%), Postives = 98/198 (49.49%), Query Frame = 3
Query:  195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAY--VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            N  +LQGL+   + G+ LA++G SGCGKST++  L          AG + ++G+  K+       A+  +   + ++   +++E + Y    +       ++  + A +      L D  NTR+G  G + LSGGQK+R++I   ++ +P +L LDE TS LD+ +   V   + K  +       RT I   H+ S+
Sbjct: 1047 NIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDP---MAGSVFLDGKEIKQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRAVSHEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQ-LSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKARE------GRTCIVIAHRLST 1234          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_SYNFM (Macrolide export ATP-binding/permease protein macB OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=macB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNT----RQAGEILIN---GRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773
            +L+G++    PG+ +A+MG SG GK+TL++ L G L   T    R  G+ +++    ++ AL      +V Q+  L+  ++  E V           ++    +ERA   +  MGL + ++          LSGGQ++RV+I   ++  P LLF DEPT  LDSA S  V+    +L++ + GV   TII   H PS
Sbjct:   22 VLRGISLKVSPGDFVALMGTSGSGKTTLMNIL-GCLDRPTSGHYRFDGQDVVDLTPDQRAALRNRKIGFVFQNFNLLPRMSAVENVMMPLSYA-GGGVSDQNGRERAGALLTRMGLGEHLDNE-----PSQLSGGQQQRVAIARALINNPSLLFADEPTGNLDSATSEEVLRVFQRLNE-EEGV---TIILVTHDPS 207          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_ALCBS (Macrolide export ATP-binding/permease protein macB OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=macB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 62/186 (33.33%), Postives = 95/186 (51.08%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK-RALAYGTSA--------YVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734
            +L G+      GE LAIMG SG GKSTL+  L G L   +   GE   +G+   A+ +   A        +V Q   LI T +  E V   A   +   + + ++K+RA+  + ++GL+D +  R        LSGGQ++RVSI   ++   K++  DEPT  LDSA+   VM ++  L ++ H V
Sbjct:   22 VLHGIDLSIEAGEFLAIMGSSGSGKSTLMHIL-GCLDQPSD--GEYRFSGQPVTAMDHDQLAWLRREMFGFVFQSYHLIGTASAWENVALPA---IYAGVPREERKQRAQQLLTDLGLEDRLENR-----PSQLSGGQQQRVSIARALMNGGKVILADEPTGALDSASGEAVMDQLRSLAEQGHTV 196          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAAW (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus aureus (strain MW2) GN=hrtA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 57/194 (29.38%), Postives = 89/194 (45.88%), Query Frame = 3
Query:  180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737
            G+      +L+G+      GE + + G SG GK+TLL  L G L   ++ +G +L N         R   L      ++ Q   L+  L V E +    Q      MTK Q   RA   +K +GL+D +N          LSGG+K+RV+I    +  PK++  DEPT+ LD+  +  V+  I +  +    +G
Sbjct:   13 GEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLL---SQTSGTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQ---EAGMTKQQSSTRAIQLLKNIGLEDRLNVY-----PHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKVVEMIRQQIKEQQMIG 195          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAAS (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus aureus (strain MSSA476) GN=hrtA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 57/194 (29.38%), Postives = 89/194 (45.88%), Query Frame = 3
Query:  180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737
            G+      +L+G+      GE + + G SG GK+TLL  L G L   ++ +G +L N         R   L      ++ Q   L+  L V E +    Q      MTK Q   RA   +K +GL+D +N          LSGG+K+RV+I    +  PK++  DEPT+ LD+  +  V+  I +  +    +G
Sbjct:   13 GEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLL---SQTSGTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQ---EAGMTKQQSSTRAIQLLKNIGLEDRLNVY-----PHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKVVEMIRQQIKEQQMIG 195          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAAN (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus aureus (strain N315) GN=hrtA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 57/194 (29.38%), Postives = 89/194 (45.88%), Query Frame = 3
Query:  180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737
            G+      +L+G+      GE + + G SG GK+TLL  L G L   ++ +G +L N         R   L      ++ Q   L+  L V E +    Q      MTK Q   RA   +K +GL+D +N          LSGG+K+RV+I    +  PK++  DEPT+ LD+  +  V+  I +  +    +G
Sbjct:   13 GEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLL---SQTSGTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQ---EAGMTKQQSSTRAIQLLKNIGLEDRLNVY-----PHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKVVEMIRQQIKEQQMIG 195          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAAM (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hrtA PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 57/194 (29.38%), Postives = 89/194 (45.88%), Query Frame = 3
Query:  180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737
            G+      +L+G+      GE + + G SG GK+TLL  L G L   ++ +G +L N         R   L      ++ Q   L+  L V E +    Q      MTK Q   RA   +K +GL+D +N          LSGG+K+RV+I    +  PK++  DEPT+ LD+  +  V+  I +  +    +G
Sbjct:   13 GEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLL---SQTSGTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQ---EAGMTKQQSSTRAIQLLKNIGLEDRLNVY-----PHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKVVEMIRQQIKEQQMIG 195          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PHNC_SHISS3.793e-1329.23Phosphonates import ATP-binding protein phnC OS=Sh... [more]
PHNC_ECOL53.793e-1329.23Phosphonates import ATP-binding protein phnC OS=Es... [more]
PHNC2_RHOPA3.793e-1331.22Phosphonates import ATP-binding protein phnC 2 OS=... [more]
MDR1_MOUSE3.793e-1332.83Multidrug resistance protein 1 OS=Mus musculus GN=... [more]
MACB_SYNFM3.793e-1331.98Macrolide export ATP-binding/permease protein macB... [more]
MACB_ALCBS3.793e-1333.33Macrolide export ATP-binding/permease protein macB... [more]
HRTA_STAAW3.793e-1329.38Putative hemin import ATP-binding protein hrtA OS=... [more]
HRTA_STAAS3.793e-1329.38Putative hemin import ATP-binding protein hrtA OS=... [more]
HRTA_STAAN3.793e-1329.38Putative hemin import ATP-binding protein hrtA OS=... [more]
HRTA_STAAM3.793e-1329.38Putative hemin import ATP-binding protein hrtA OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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