CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG6_DICDI (ABC transporter G family member 6 OS=Dictyostelium discoideum GN=abcG6 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.442e-36 Identity = 103/272 (37.87%), Postives = 156/272 (57.35%), Query Frame = 3 Query: 15 SSLDHSIPVP-AISRAFEVVESSSNNKTATHSINVNEDD---GDGVFLTWQDLWVTV------PDGQKKGNRSILQGLT---GYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA-LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQ 788 S+L S+ P I+ S++NN ++ + N D G +L ++ L V PD KK LQ LT GY +PG++LA+MGPSG GKSTLLD LA R + GEILING+ + AYV Q D L T TV EA+ +SA+ +LP +TK +++ + ++ + L + +IG G GLS Q++RV+I +E+ + P++LFLDEPTSGLDS ++ V+ + K+ + V +RT+I ++HQPS+ +F+ Sbjct: 866 SNLSPSVNSPITINSPMPTSPSNNNNNNNSNEKSKNGKDIGSETGSYLQFKKLCYAVDVKVDDPDNPKKKKSQRLQLLTDIDGYVKPGQMLALMGPSGAGKSTLLDVLAQR-KTGGHITGEILINGKPPSEFTNRIRAYVEQMDVLPPTQTVREAIAFSARCRLPPEVTKEERESYVDKIVEVLSLSSIKDLKIGVLG-DGLSVSQRKRVNIGVELASNPEILFLDEPTSGLDSGDAFKVIDVVNKIAK----VMNRTVICTVHQPSAAIFE 1131 HSP 2 Score: 121.709 bits (304), Expect = 4.615e-27 Identity = 79/259 (30.50%), Postives = 135/259 (52.12%), Query Frame = 3 Query: 24 DHSIPVPAISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQ-KKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 D P+P E++ + N++ +D G+++ ++ TV + KK ++ ++ Y +P E+ I+G GCGKST+ LAG+L + GE+L NG + +YVTQDD + TLTV E ++ +T +KKE + + +GL+++ NT +G +G+SGGQK+RV+I + ++ LL +DEPTSGLDS+ S+ ++S + K G + ++ QPS ++ L Sbjct: 102 DEYFPIPLD----ELMPNHENDELTKKIKQTRPEDKTGLYVYCRNATYTVKHRENKKVKIKLIDDISFYLKPKEMTLILGTPGCGKSTIFQMLAGQL-KDKHFKGELLFNGHPINHKNHHRDISYVTQDDIHVPTLTVKETFRFALDCLGRKELTNEEKKETVDNCMNLLGLKESENTVVGDNFVRGISGGQKKRVTIGVGVIKGSNLLLMDEPTSGLDSSTSFEILSDVKKFVT----YGYSPALITLLQPSVQLTSL 351
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB7G_ARATH (ABC transporter G family member 7 OS=Arabidopsis thaliana GN=ABCG7 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.442e-36 Identity = 83/228 (36.40%), Postives = 137/228 (60.09%), Query Frame = 3 Query: 123 DDGDG-----VFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQ--AGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVF 785 +DG G V + W+++ ++ D K R +L+ ++G A+PG LLAIMGPSG GK+TLL+ LAG+L + R +G + +NG+ + A+V Q+D + LTV E + ++A+LQLP+ + ++ E + ++GL ++ +G +G+SGG+K+R+S+ E++ P ++F DEPT+GLD+ + VM + KL Q H T+I SIHQP V+ Sbjct: 58 EDGGGDSIRPVTIRWRNITCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLSLSPRLHLSGLLEVNGKPSSSKAYKLAFVRQEDLFFSQLTVRETLSFAAELQLPEISSAEERDEYVNNLLLKLGLVSCADSCVGDAKVRGISGGEKKRLSLACELIASPSVIFADEPTTGLDAFQAEKVMETLQKLAQDGH-----TVICSIHQPRGSVY 280
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.442e-36 Identity = 83/200 (41.50%), Postives = 129/200 (64.50%), Query Frame = 3 Query: 198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 +++L ++G R GE++A++G SG GKSTL+DALA R+ + + G + +NG + + SAYV QDD L LTV E + ++A+ +LP ++ K +KK R + I ++G+++A T IG G +G+SGG++RRVSI I+++ P LLFLDEPTSGLDS +++ V+ + ++ Q +I SIHQPS V L Sbjct: 107 KTLLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGSLK-GTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLKRIAQ-----SGSIVIMSIHQPSHRVLGL 300
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 2.442e-36 Identity = 83/200 (41.50%), Postives = 129/200 (64.50%), Query Frame = 3 Query: 198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 +++L ++G R GE+LA++G SG GKSTL+DALA R+ + + G + +NG + + SAYV QDD L LTV E + ++A+ +LP ++ K +KK R + I ++G+++A T IG G +G+SGG++RRVSI I+++ P +LFLDEPTSGLDS +++ V+ + ++ + II SIHQPS V L Sbjct: 105 KTLLDNISGETRDGEILAVLGASGSGKSTLIDALANRIAKGSLK-GTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLKRIAE-----SGSIIIMSIHQPSHRVLSL 298
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG2_MOUSE (ATP-binding cassette sub-family G member 2 OS=Mus musculus GN=Abcg2 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.165e-36 Identity = 86/204 (42.16%), Postives = 130/204 (63.73%), Query Frame = 3 Query: 183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 +K + IL + G +PG L AI+GP+G GKS+LLD LA R +G++LING + + S YV QDD ++ TLTV E + +SA L+LP TM +K ER IKE+GL+ ++++G +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+L Sbjct: 55 RKTVEKEILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPKGL-SGDVLINGAPQPAHFKCCSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMKNHEKNERINTIIKELGLEKVADSKVGTQFIRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKL 251
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 5.439e-36 Identity = 86/204 (42.16%), Postives = 130/204 (63.73%), Query Frame = 3 Query: 183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 +K + IL + G +PG L AI+GP+G GKS+LLD LA R + +G++LING R + S YV QDD ++ TLTV E + +SA L+L TMT +K ER I+E+GL ++++G +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+L Sbjct: 56 RKPVEKEILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSGL-SGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKL 252
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG8_RAT (ATP-binding cassette sub-family G member 8 OS=Rattus norvegicus GN=Abcg8 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 7.104e-36 Identity = 78/197 (39.59%), Postives = 128/197 (64.97%), Query Frame = 3 Query: 207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA--LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 ++ L+ R G++LAI+G +GCG++TLLD + GR ++G+I ING+ L A+V Q D L+ LTV E + + AQ++LP T ++ Q+ +R E I E+ L+ NTR+G +G+SGG++RRVSI +++L P +L LDEPTSGLDS ++ ++ +++L + G+R ++ S+HQP S++F+L Sbjct: 110 IRNLSFKVRSGQMLAIIGSAGCGRATLLDVITGRDHGGKMKSGQIWINGQPSTPQLIQKCVAHVRQQDQLLPNLTVRETLTFIAQMRLPKTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVRTLSRLAK-----GNRLVLISLHQPRSDIFRL 301
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.104e-36 Identity = 85/204 (41.67%), Postives = 129/204 (63.24%), Query Frame = 3 Query: 183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 +K + IL + G +PG L AI+GP+G GKS+LLD LA R +G++LING + + +S YV QDD ++ TLTV E + +SA L+LP M +K ER IKE+GL ++++G +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+L Sbjct: 55 RKTAEKEILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPRGL-SGDVLINGAPQPANFKCSSGYVVQDDVVMGTLTVRENLQFSAALRLPKAMKTHEKNERINTIIKELGLDKVADSKVGTQFTRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKL 251
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG8_MOUSE (ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.278e-36 Identity = 78/197 (39.59%), Postives = 129/197 (65.48%), Query Frame = 3 Query: 207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA--LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 ++ L+ R G++LAI+G SGCG+++LLD + GR ++G+I ING+ L A+V Q D L+ LTV E + + AQ++LP T ++ Q+ +R E I E+ L+ NTR+G +G+SGG++RRVSI +++L P +L LDEPTSGLDS ++ +++ +++L + G+R ++ S+HQP S++F+L Sbjct: 89 IRNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKMKSGQIWINGQPSTPQLVRKCVAHVRQHDQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAK-----GNRLVLISLHQPRSDIFRL 280
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG8_HUMAN (ATP-binding cassette sub-family G member 8 OS=Homo sapiens GN=ABCG8 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.700e-35 Identity = 78/197 (39.59%), Postives = 129/197 (65.48%), Query Frame = 3 Query: 207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA--LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 +Q L+ R G++LAI+G SGCG+++LLD + GR ++G+I ING+ + L A+V Q + L+ LTV E + + AQ++LP T ++ Q+ +R E I E+ L+ +TR+G +GLSGG++RRVSI +++L P +L LDEPTSGLDS ++ ++ +++L + G+R ++ S+HQP S++F+L Sbjct: 88 IQNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKIKSGQIWINGQPSSPQLVRKCVAHVRQHNQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCADTRVGNMYVRGLSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVKTLSRLAK-----GNRLVLISLHQPRSDIFRL 279 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |