CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG6_DICDI (ABC transporter G family member 6 OS=Dictyostelium discoideum GN=abcG6 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.442e-36
Identity = 103/272 (37.87%), Postives = 156/272 (57.35%), Query Frame = 3
Query:   15 SSLDHSIPVP-AISRAFEVVESSSNNKTATHSINVNEDD---GDGVFLTWQDLWVTV------PDGQKKGNRSILQGLT---GYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA-LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQ 788
            S+L  S+  P  I+       S++NN   ++  + N  D     G +L ++ L   V      PD  KK     LQ LT   GY +PG++LA+MGPSG GKSTLLD LA R  +     GEILING+  +       AYV Q D L  T TV EA+ +SA+ +LP  +TK +++   +  ++ + L    + +IG  G  GLS  Q++RV+I +E+ + P++LFLDEPTSGLDS  ++ V+  + K+ +    V +RT+I ++HQPS+ +F+
Sbjct:  866 SNLSPSVNSPITINSPMPTSPSNNNNNNNSNEKSKNGKDIGSETGSYLQFKKLCYAVDVKVDDPDNPKKKKSQRLQLLTDIDGYVKPGQMLALMGPSGAGKSTLLDVLAQR-KTGGHITGEILINGKPPSEFTNRIRAYVEQMDVLPPTQTVREAIAFSARCRLPPEVTKEERESYVDKIVEVLSLSSIKDLKIGVLG-DGLSVSQRKRVNIGVELASNPEILFLDEPTSGLDSGDAFKVIDVVNKIAK----VMNRTVICTVHQPSAAIFE 1131          

HSP 2 Score: 121.709 bits (304), Expect = 4.615e-27
Identity = 79/259 (30.50%), Postives = 135/259 (52.12%), Query Frame = 3
Query:   24 DHSIPVPAISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQ-KKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            D   P+P      E++ +  N++          +D  G+++  ++   TV   + KK    ++  ++ Y +P E+  I+G  GCGKST+   LAG+L  +    GE+L NG        +   +YVTQDD  + TLTV E   ++        +T  +KKE  +  +  +GL+++ NT +G    +G+SGGQK+RV+I + ++    LL +DEPTSGLDS+ S+ ++S + K        G    + ++ QPS ++  L
Sbjct:  102 DEYFPIPLD----ELMPNHENDELTKKIKQTRPEDKTGLYVYCRNATYTVKHRENKKVKIKLIDDISFYLKPKEMTLILGTPGCGKSTIFQMLAGQL-KDKHFKGELLFNGHPINHKNHHRDISYVTQDDIHVPTLTVKETFRFALDCLGRKELTNEEKKETVDNCMNLLGLKESENTVVGDNFVRGISGGQKKRVTIGVGVIKGSNLLLMDEPTSGLDSSTSFEILSDVKKFVT----YGYSPALITLLQPSVQLTSL 351          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB7G_ARATH (ABC transporter G family member 7 OS=Arabidopsis thaliana GN=ABCG7 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.442e-36
Identity = 83/228 (36.40%), Postives = 137/228 (60.09%), Query Frame = 3
Query:  123 DDGDG-----VFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQ--AGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVF 785
            +DG G     V + W+++  ++ D   K  R +L+ ++G A+PG LLAIMGPSG GK+TLL+ LAG+L  + R   +G + +NG+  +      A+V Q+D   + LTV E + ++A+LQLP+  +  ++ E     + ++GL    ++ +G    +G+SGG+K+R+S+  E++  P ++F DEPT+GLD+  +  VM  + KL Q  H     T+I SIHQP   V+
Sbjct:   58 EDGGGDSIRPVTIRWRNITCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLSLSPRLHLSGLLEVNGKPSSSKAYKLAFVRQEDLFFSQLTVRETLSFAAELQLPEISSAEERDEYVNNLLLKLGLVSCADSCVGDAKVRGISGGEKKRLSLACELIASPSVIFADEPTTGLDAFQAEKVMETLQKLAQDGH-----TVICSIHQPRGSVY 280          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.442e-36
Identity = 83/200 (41.50%), Postives = 129/200 (64.50%), Query Frame = 3
Query:  198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +++L  ++G  R GE++A++G SG GKSTL+DALA R+   + + G + +NG   +  +    SAYV QDD L   LTV E + ++A+ +LP ++ K +KK R +  I ++G+++A  T IG  G +G+SGG++RRVSI I+++  P LLFLDEPTSGLDS +++ V+  + ++ Q         +I SIHQPS  V  L
Sbjct:  107 KTLLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGSLK-GTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLKRIAQ-----SGSIVIMSIHQPSHRVLGL 300          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.442e-36
Identity = 83/200 (41.50%), Postives = 129/200 (64.50%), Query Frame = 3
Query:  198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +++L  ++G  R GE+LA++G SG GKSTL+DALA R+   + + G + +NG   +  +    SAYV QDD L   LTV E + ++A+ +LP ++ K +KK R +  I ++G+++A  T IG  G +G+SGG++RRVSI I+++  P +LFLDEPTSGLDS +++ V+  + ++ +         II SIHQPS  V  L
Sbjct:  105 KTLLDNISGETRDGEILAVLGASGSGKSTLIDALANRIAKGSLK-GTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLKRIAE-----SGSIIIMSIHQPSHRVLSL 298          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG2_MOUSE (ATP-binding cassette sub-family G member 2 OS=Mus musculus GN=Abcg2 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.165e-36
Identity = 86/204 (42.16%), Postives = 130/204 (63.73%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +K   + IL  + G  +PG L AI+GP+G GKS+LLD LA R       +G++LING  +   +   S YV QDD ++ TLTV E + +SA L+LP TM   +K ER    IKE+GL+   ++++G    +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RTII SIHQP   +F+L
Sbjct:   55 RKTVEKEILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPKGL-SGDVLINGAPQPAHFKCCSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMKNHEKNERINTIIKELGLEKVADSKVGTQFIRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKL 251          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 5.439e-36
Identity = 86/204 (42.16%), Postives = 130/204 (63.73%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +K   + IL  + G  +PG L AI+GP+G GKS+LLD LA R   +   +G++LING  R   +   S YV QDD ++ TLTV E + +SA L+L  TMT  +K ER    I+E+GL    ++++G    +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RTII SIHQP   +F+L
Sbjct:   56 RKPVEKEILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSGL-SGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKL 252          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG8_RAT (ATP-binding cassette sub-family G member 8 OS=Rattus norvegicus GN=Abcg8 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 7.104e-36
Identity = 78/197 (39.59%), Postives = 128/197 (64.97%), Query Frame = 3
Query:  207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA--LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            ++ L+   R G++LAI+G +GCG++TLLD + GR      ++G+I ING+     L     A+V Q D L+  LTV E + + AQ++LP T ++ Q+ +R E  I E+ L+   NTR+G    +G+SGG++RRVSI +++L  P +L LDEPTSGLDS  ++ ++  +++L +     G+R ++ S+HQP S++F+L
Sbjct:  110 IRNLSFKVRSGQMLAIIGSAGCGRATLLDVITGRDHGGKMKSGQIWINGQPSTPQLIQKCVAHVRQQDQLLPNLTVRETLTFIAQMRLPKTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVRTLSRLAK-----GNRLVLISLHQPRSDIFRL 301          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.104e-36
Identity = 85/204 (41.67%), Postives = 129/204 (63.24%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +K   + IL  + G  +PG L AI+GP+G GKS+LLD LA R       +G++LING  +   +  +S YV QDD ++ TLTV E + +SA L+LP  M   +K ER    IKE+GL    ++++G    +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RTII SIHQP   +F+L
Sbjct:   55 RKTAEKEILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPRGL-SGDVLINGAPQPANFKCSSGYVVQDDVVMGTLTVRENLQFSAALRLPKAMKTHEKNERINTIIKELGLDKVADSKVGTQFTRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKL 251          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG8_MOUSE (ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.278e-36
Identity = 78/197 (39.59%), Postives = 129/197 (65.48%), Query Frame = 3
Query:  207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA--LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            ++ L+   R G++LAI+G SGCG+++LLD + GR      ++G+I ING+     L     A+V Q D L+  LTV E + + AQ++LP T ++ Q+ +R E  I E+ L+   NTR+G    +G+SGG++RRVSI +++L  P +L LDEPTSGLDS  ++ +++ +++L +     G+R ++ S+HQP S++F+L
Sbjct:   89 IRNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKMKSGQIWINGQPSTPQLVRKCVAHVRQHDQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAK-----GNRLVLISLHQPRSDIFRL 280          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG8_HUMAN (ATP-binding cassette sub-family G member 8 OS=Homo sapiens GN=ABCG8 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.700e-35
Identity = 78/197 (39.59%), Postives = 129/197 (65.48%), Query Frame = 3
Query:  207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA--LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +Q L+   R G++LAI+G SGCG+++LLD + GR      ++G+I ING+  +  L     A+V Q + L+  LTV E + + AQ++LP T ++ Q+ +R E  I E+ L+   +TR+G    +GLSGG++RRVSI +++L  P +L LDEPTSGLDS  ++ ++  +++L +     G+R ++ S+HQP S++F+L
Sbjct:   88 IQNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKIKSGQIWINGQPSSPQLVRKCVAHVRQHNQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCADTRVGNMYVRGLSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVKTLSRLAK-----GNRLVLISLHQPRSDIFRL 279          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ABCG6_DICDI2.442e-3637.87ABC transporter G family member 6 OS=Dictyostelium... [more]
AB7G_ARATH2.442e-3636.40ABC transporter G family member 7 OS=Arabidopsis t... [more]
AB1G_ARATH2.442e-3641.50ABC transporter G family member 1 OS=Arabidopsis t... [more]
AB16G_ARATH2.442e-3641.50ABC transporter G family member 16 OS=Arabidopsis ... [more]
ABCG2_MOUSE4.165e-3642.16ATP-binding cassette sub-family G member 2 OS=Mus ... [more]
ABCG2_HUMAN5.439e-3642.16ATP-binding cassette sub-family G member 2 OS=Homo... [more]
ABCG8_RAT7.104e-3639.59ATP-binding cassette sub-family G member 8 OS=Ratt... [more]
ABCG2_RAT7.104e-3641.67ATP-binding cassette sub-family G member 2 OS=Ratt... [more]
ABCG8_MOUSE9.278e-3639.59ATP-binding cassette sub-family G member 8 OS=Mus ... [more]
ABCG8_HUMAN2.700e-3539.59ATP-binding cassette sub-family G member 8 OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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