CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_VIBCH (Fe(3+) ions import ATP-binding protein fbpC OS=Vibrio cholerae GN=fbpC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12 Identity = 53/181 (29.28%), Postives = 95/181 (52.49%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQ-LQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 G+ +++ L + G L+ ++GPSGCGK+T+L +AG +G+I I+G +R++ V Q AL +++ E V Y + L+LP + ++R + +K + L+ +G +SGGQ++RV++ ++ +PK+L DEP S LD+ + I +L QR Sbjct: 17 GSNTVIGNLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGL---EKPTSGQIFIDGEDVTERSIQQRDICMVFQSYALFPHMSLYENVAYGLKMLKLPSE----EVRQRVDEALKIVDLEG-----MGERYVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMRETIRELQQR 185
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_PASMU (Fe(3+) ions import ATP-binding protein fbpC OS=Pasteurella multocida GN=fbpC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12 Identity = 55/183 (30.05%), Postives = 97/183 (53.01%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAK---GLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 G ++ L + G ++ ++GPSGCGK+T+L +AG L S T +G+I I+G K ++ V Q AL +++ + V Y ++Q + K+ERA+ + + L D + G+ + +SGGQ++RV++ ++ +PK+L DEP S LD+ + +I +L QR Sbjct: 17 GKAVVIDNLDLSIKRGTMVTLLGPSGCGKTTVLRLVAG-LESPT--SGQIFIDGEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLKMQ------GVSKEERAKRVKEALELVD-----LAGFEDRYVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMREKIRELQQR 185
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA_BRAJA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Bradyrhizobium japonicum GN=cysA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12 Identity = 58/172 (33.72%), Postives = 89/172 (51.74%), Query Frame = 3 Query: 183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS----AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGA----KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674 +K G+ + L G+ GELLA++GPSG GK+TLL +A G + +GE+ NG + ALA G +V Q AL +TV E V + ++Q + +KE A + + L D + W A LSGGQ++R+++ + P++L LDEP LD+ Sbjct: 10 KKFGSFAALDGVNLKVDNGELLALLGPSGSGKTTLLRIIA---GLDWPDSGEVSFNG-EDALAQGARERHVGFVFQHYALFRHMTVFENVAFGLRVQ-----PRAVRKEEARIRARVKELLDLVQL---DWLADRYPSQLSGGQRQRIALARALAIEPRILLLDEPFGALDA 169
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y1384_MYCBO (Uncharacterized ABC transporter ATP-binding protein Mb1384 OS=Mycobacterium bovis GN=Mb1384 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 71/221 (32.13%), Postives = 104/221 (47.06%), Query Frame = 3 Query: 147 TWQDLWVT-------VPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK----RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 TW+D V V G G+ +L G++ +PG AI+GPSGCGKST+L +AG L TR G +LI+G A A V + T+ + V+ + D + + R + I L D NT +G G+ LSGG+++RVSI +L +L +DE TS LD+ V+ +A D R SRT + H+ +S Sbjct: 322 TWRDGAVVPRIEFDDVAFGYDGGSGPVLDGVSFCLQPGTTTAIVGPSGCGKSTILALIAG-LHQPTR--GRVLIDGTDVATLDARAQQAVCSVVFQHPYLFHGTIRDNVFAADPGASDDQFAQAVRLARVDELIAR--LPDGANTIVGEAGS-ALSGGERQRVSIARALLKAAPVLLVDEATSALDAENEAAVVDALA-ADPR-----SRTRVIVAHRLAS 530
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y1349_MYCTU (Uncharacterized ABC transporter ATP-binding protein Rv1349/MT1392 OS=Mycobacterium tuberculosis GN=Rv1349 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 71/221 (32.13%), Postives = 104/221 (47.06%), Query Frame = 3 Query: 147 TWQDLWVT-------VPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK----RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 TW+D V V G G+ +L G++ +PG AI+GPSGCGKST+L +AG L TR G +LI+G A A V + T+ + V+ + D + + R + I L D NT +G G+ LSGG+++RVSI +L +L +DE TS LD+ V+ +A D R SRT + H+ +S Sbjct: 322 TWRDGAVVPRIEFDDVAFGYDGGSGPVLDGVSFCLQPGTTTAIVGPSGCGKSTILALIAG-LHQPTR--GRVLIDGTDVATLDARAQQAVCSVVFQHPYLFHGTIRDNVFAADPGASDDQFAQAVRLARVDELIAR--LPDGANTIVGEAGS-ALSGGERQRVSIARALLKAAPVLLVDEATSALDAENEAAVVDALA-ADPR-----SRTRVIVAHRLAS 530
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: UGPC_RHILO (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Rhizobium loti GN=ugpC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING---RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 GE + I+GPSGCGKSTLL +AG GEI I+G K A V Q+ AL ++V++ + YS ++ + ++ +R + + + L+ ++ + LSGGQ++RV++ M+ PK+ DEP S LD+ + S I KL +R Sbjct: 29 GEFVVILGPSGCGKSTLLRMIAGL---EEISDGEISIDGTVVNKLEPRERGCAMVFQNYALYPHMSVAQNIGYSLKVA---GVPSAERTQRIQAVARTLELEHLLDRK-----PMALSGGQRQRVAMGRAMIREPKVFLFDEPLSNLDAKLRVQMRSEIRKLHRR 182
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_RALEH (Aliphatic sulfonates import ATP-binding protein ssuB OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ssuB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 61/178 (34.27%), Postives = 85/178 (47.75%), Query Frame = 3 Query: 198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVT---QDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 R +L + PGE LAI+G SGCGKSTLL +A G G I ++G A A V QD L+ V + V L LP T ++ A + ++GL D R W A+ LSGGQ++RV++ ++ P+LL LDEP LD+ + I L +R Sbjct: 51 REVLHNVALDVAPGEFLAIVGRSGCGKSTLLRLVA---GLEAADGGSITVDGESAAKGRARHADVRVMFQDARLLPWKRVLDNV----ALGLPRT-----RRGEAADVLAQVGLAD----RAREWPAR-LSGGQRQRVALARALVHHPQLLLLDEPLGALDALTRIEMQGLIESLWRR 211
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_LEGPA (Spermidine/putrescine import ATP-binding protein potA OS=Legionella pneumophila (strain Paris) GN=potA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 60/184 (32.61%), Postives = 90/184 (48.91%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 GN IL ++ GE L ++GPSGCGK+TLL ++G GEI ING+ KR + V Q AL L+V E V ++ + + + KER +K + L+ + K LSGGQ++RV+I ++ RP++L LDEP S LD + S + +L + Sbjct: 16 GNTPILNNVSLNVNHGEFLTLLGPSGCGKTTLLRLISG---FEQPTQGEIFINGQCVNQLPPQKRDVHT-----VFQSYALFPHLSVFENVAFALRCKKTSNQ---EIKERVFDALKLVQLELLAERNV-----KQLSGGQQQRVAIARAIINRPQVLLLDEPLSSLDYRLRKAMQSELKQLQK 183
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC1_RALME (Phosphonates import ATP-binding protein phnC 1 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=phnC1 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 60/210 (28.57%), Postives = 105/210 (50.00%), Query Frame = 3 Query: 189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR------------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEM-----TIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 + +R L +T PGE++A++G SG GKSTLL +AG + + +GEIL+NGR +R A +V Q L+ L V V ++P + L+ + +E+ + ++G+ D R A LSGGQ++R +I ++ +++ DEP + LD +S VMS++A++++ ++ S+HQ Sbjct: 15 RADRKALDDVTLQIAPGEMVALLGASGSGKSTLLRHVAGFVTGDAG-SGEILVNGRTVQRNGRLARDVRRVRA--DIGFVFQQFNLVGRLPVITNVLVGMLTRVPKWRSLLRIFKASEVQAGLDALAQVGIDDYAFQR-----ASTLSGGQQQRAAIARTLVQNAQVILADEPIASLDPESSRRVMSQLAQINR----TRKVAVVVSLHQ 212
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD_SPHAL (Lipoprotein-releasing system ATP-binding protein lolD OS=Sphingopyxis alaskensis GN=lolD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 56/182 (30.77%), Postives = 87/182 (47.80%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDA---LAGRLGSNTRQAGEILI---NGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHG 731 +L+G+ R GE++A++GPSG GKST+L A L G G R GE + G + +V Q L+ E V QL + + ++RA + +GL + ++ + LSGG+++RV++ + RP L+ DEPT LD A + V + L RDHG Sbjct: 24 VLRGVNASLRRGEIVALLGPSGSGKSTMLQAVGLLEGGFGGTIRIDGEDVTRFQQGERTKTRREKIGFVYQFHHLLPDFNAIENVVLP---QLIRGAGQAEAEDRAADLLARLGLSERLHHK-----PSKLSGGEQQRVAVARALANRPLLVLADEPTGNLDEATADRVFDQFVAL-VRDHG 196 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |