CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_VIBCH (Fe(3+) ions import ATP-binding protein fbpC OS=Vibrio cholerae GN=fbpC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 53/181 (29.28%), Postives = 95/181 (52.49%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQ-LQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            G+ +++  L    + G L+ ++GPSGCGK+T+L  +AG        +G+I I+G    +R++       V Q  AL   +++ E V Y  + L+LP      + ++R +  +K + L+      +G      +SGGQ++RV++   ++ +PK+L  DEP S LD+     +   I +L QR
Sbjct:   17 GSNTVIGNLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGL---EKPTSGQIFIDGEDVTERSIQQRDICMVFQSYALFPHMSLYENVAYGLKMLKLPSE----EVRQRVDEALKIVDLEG-----MGERYVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMRETIRELQQR 185          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_PASMU (Fe(3+) ions import ATP-binding protein fbpC OS=Pasteurella multocida GN=fbpC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 55/183 (30.05%), Postives = 97/183 (53.01%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAK---GLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            G   ++  L    + G ++ ++GPSGCGK+T+L  +AG L S T  +G+I I+G    K ++       V Q  AL   +++ + V Y  ++Q       + K+ERA+   + + L D     + G+  +    +SGGQ++RV++   ++ +PK+L  DEP S LD+     +  +I +L QR
Sbjct:   17 GKAVVIDNLDLSIKRGTMVTLLGPSGCGKTTVLRLVAG-LESPT--SGQIFIDGEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLKMQ------GVSKEERAKRVKEALELVD-----LAGFEDRYVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMREKIRELQQR 185          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA_BRAJA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Bradyrhizobium japonicum GN=cysA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 58/172 (33.72%), Postives = 89/172 (51.74%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS----AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGA----KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            +K G+ + L G+      GELLA++GPSG GK+TLL  +A   G +   +GE+  NG + ALA G       +V Q  AL   +TV E V +  ++Q      +  +KE A +  +   L D +      W A      LSGGQ++R+++   +   P++L LDEP   LD+
Sbjct:   10 KKFGSFAALDGVNLKVDNGELLALLGPSGSGKTTLLRIIA---GLDWPDSGEVSFNG-EDALAQGARERHVGFVFQHYALFRHMTVFENVAFGLRVQ-----PRAVRKEEARIRARVKELLDLVQL---DWLADRYPSQLSGGQRQRIALARALAIEPRILLLDEPFGALDA 169          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y1384_MYCBO (Uncharacterized ABC transporter ATP-binding protein Mb1384 OS=Mycobacterium bovis GN=Mb1384 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 71/221 (32.13%), Postives = 104/221 (47.06%), Query Frame = 3
Query:  147 TWQDLWVT-------VPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK----RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            TW+D  V        V  G   G+  +L G++   +PG   AI+GPSGCGKST+L  +AG L   TR  G +LI+G       A A      V      +   T+ + V+ +      D   +  +  R +  I    L D  NT +G  G+  LSGG+++RVSI   +L    +L +DE TS LD+     V+  +A  D R     SRT +   H+ +S
Sbjct:  322 TWRDGAVVPRIEFDDVAFGYDGGSGPVLDGVSFCLQPGTTTAIVGPSGCGKSTILALIAG-LHQPTR--GRVLIDGTDVATLDARAQQAVCSVVFQHPYLFHGTIRDNVFAADPGASDDQFAQAVRLARVDELIAR--LPDGANTIVGEAGS-ALSGGERQRVSIARALLKAAPVLLVDEATSALDAENEAAVVDALA-ADPR-----SRTRVIVAHRLAS 530          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y1349_MYCTU (Uncharacterized ABC transporter ATP-binding protein Rv1349/MT1392 OS=Mycobacterium tuberculosis GN=Rv1349 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 71/221 (32.13%), Postives = 104/221 (47.06%), Query Frame = 3
Query:  147 TWQDLWVT-------VPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK----RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            TW+D  V        V  G   G+  +L G++   +PG   AI+GPSGCGKST+L  +AG L   TR  G +LI+G       A A      V      +   T+ + V+ +      D   +  +  R +  I    L D  NT +G  G+  LSGG+++RVSI   +L    +L +DE TS LD+     V+  +A  D R     SRT +   H+ +S
Sbjct:  322 TWRDGAVVPRIEFDDVAFGYDGGSGPVLDGVSFCLQPGTTTAIVGPSGCGKSTILALIAG-LHQPTR--GRVLIDGTDVATLDARAQQAVCSVVFQHPYLFHGTIRDNVFAADPGASDDQFAQAVRLARVDELIAR--LPDGANTIVGEAGS-ALSGGERQRVSIARALLKAAPVLLVDEATSALDAENEAAVVDALA-ADPR-----SRTRVIVAHRLAS 530          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: UGPC_RHILO (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Rhizobium loti GN=ugpC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING---RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            GE + I+GPSGCGKSTLL  +AG         GEI I+G    K        A V Q+ AL   ++V++ + YS ++     +   ++ +R +   + + L+  ++ +        LSGGQ++RV++   M+  PK+   DEP S LD+     + S I KL +R
Sbjct:   29 GEFVVILGPSGCGKSTLLRMIAGL---EEISDGEISIDGTVVNKLEPRERGCAMVFQNYALYPHMSVAQNIGYSLKVA---GVPSAERTQRIQAVARTLELEHLLDRK-----PMALSGGQRQRVAMGRAMIREPKVFLFDEPLSNLDAKLRVQMRSEIRKLHRR 182          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_RALEH (Aliphatic sulfonates import ATP-binding protein ssuB OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ssuB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 61/178 (34.27%), Postives = 85/178 (47.75%), Query Frame = 3
Query:  198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVT---QDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            R +L  +     PGE LAI+G SGCGKSTLL  +A   G      G I ++G   A      A V    QD  L+    V + V     L LP T     ++  A   + ++GL D    R   W A+ LSGGQ++RV++   ++  P+LL LDEP   LD+     +   I  L +R
Sbjct:   51 REVLHNVALDVAPGEFLAIVGRSGCGKSTLLRLVA---GLEAADGGSITVDGESAAKGRARHADVRVMFQDARLLPWKRVLDNV----ALGLPRT-----RRGEAADVLAQVGLAD----RAREWPAR-LSGGQRQRVALARALVHHPQLLLLDEPLGALDALTRIEMQGLIESLWRR 211          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_LEGPA (Spermidine/putrescine import ATP-binding protein potA OS=Legionella pneumophila (strain Paris) GN=potA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 60/184 (32.61%), Postives = 90/184 (48.91%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            GN  IL  ++     GE L ++GPSGCGK+TLL  ++G         GEI ING+        KR +       V Q  AL   L+V E V ++ + +        + KER    +K + L+      +     K LSGGQ++RV+I   ++ RP++L LDEP S LD      + S + +L +
Sbjct:   16 GNTPILNNVSLNVNHGEFLTLLGPSGCGKTTLLRLISG---FEQPTQGEIFINGQCVNQLPPQKRDVHT-----VFQSYALFPHLSVFENVAFALRCKKTSNQ---EIKERVFDALKLVQLELLAERNV-----KQLSGGQQQRVAIARAIINRPQVLLLDEPLSSLDYRLRKAMQSELKQLQK 183          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC1_RALME (Phosphonates import ATP-binding protein phnC 1 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=phnC1 PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 60/210 (28.57%), Postives = 105/210 (50.00%), Query Frame = 3
Query:  189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR------------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEM-----TIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            + +R  L  +T    PGE++A++G SG GKSTLL  +AG +  +   +GEIL+NGR            +R  A     +V Q   L+  L V   V      ++P   + L+  + +E+      + ++G+ D    R     A  LSGGQ++R +I   ++   +++  DEP + LD  +S  VMS++A++++         ++ S+HQ
Sbjct:   15 RADRKALDDVTLQIAPGEMVALLGASGSGKSTLLRHVAGFVTGDAG-SGEILVNGRTVQRNGRLARDVRRVRA--DIGFVFQQFNLVGRLPVITNVLVGMLTRVPKWRSLLRIFKASEVQAGLDALAQVGIDDYAFQR-----ASTLSGGQQQRAAIARTLVQNAQVILADEPIASLDPESSRRVMSQLAQINR----TRKVAVVVSLHQ 212          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD_SPHAL (Lipoprotein-releasing system ATP-binding protein lolD OS=Sphingopyxis alaskensis GN=lolD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 56/182 (30.77%), Postives = 87/182 (47.80%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDA---LAGRLGSNTRQAGEILI---NGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHG 731
            +L+G+    R GE++A++GPSG GKST+L A   L G  G   R  GE +     G +         +V Q   L+      E V      QL     + + ++RA   +  +GL + ++ +        LSGG+++RV++   +  RP L+  DEPT  LD A +  V  +   L  RDHG
Sbjct:   24 VLRGVNASLRRGEIVALLGPSGSGKSTMLQAVGLLEGGFGGTIRIDGEDVTRFQQGERTKTRREKIGFVYQFHHLLPDFNAIENVVLP---QLIRGAGQAEAEDRAADLLARLGLSERLHHK-----PSKLSGGEQQRVAVARALANRPLLVLADEPTGNLDEATADRVFDQFVAL-VRDHG 196          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FBPC_VIBCH1.104e-1229.28Fe(3+) ions import ATP-binding protein fbpC OS=Vib... [more]
FBPC_PASMU1.104e-1230.05Fe(3+) ions import ATP-binding protein fbpC OS=Pas... [more]
CYSA_BRAJA1.104e-1233.72Sulfate/thiosulfate import ATP-binding protein cys... [more]
Y1384_MYCBO1.441e-1232.13Uncharacterized ABC transporter ATP-binding protei... [more]
Y1349_MYCTU1.441e-1232.13Uncharacterized ABC transporter ATP-binding protei... [more]
UGPC_RHILO1.441e-1232.12sn-glycerol-3-phosphate import ATP-binding protein... [more]
SSUB_RALEH1.441e-1234.27Aliphatic sulfonates import ATP-binding protein ss... [more]
POTA_LEGPA1.441e-1232.61Spermidine/putrescine import ATP-binding protein p... [more]
PHNC1_RALME1.441e-1228.57Phosphonates import ATP-binding protein phnC 1 OS=... [more]
LOLD_SPHAL1.441e-1230.77Lipoprotein-releasing system ATP-binding protein l... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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