CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD_ROSDO (Lipoprotein-releasing system ATP-binding protein lolD OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=lolD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 57/189 (30.16%), Postives = 91/189 (48.15%), Query Frame = 3 Query: 201 SILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING---------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGS 740 ++L+G+ GE++A++ PSG GKSTLL +AG L + G++LI G R+ A+ ++ Q L+ +E + QL + ++K ERA + +G+ R G LSGG+++RV+ C + PK+L DEPT LD S V + L RD G+ + Sbjct: 24 TVLRGVDLRIAKGEVVALVAPSGAGKSTLLH-IAGLL--DEADTGQVLIEGEEMRGLSDARRTAIRRSDVGFIYQFHHLLPEFNAAENIILP---QLANGVSKAAAAERAAGLLSAVGIASRAAHRPGA-----LSGGEQQRVAFCRALANAPKMLLADEPTGNLDPGTSDQVFDALMNL-VRDTGLSA 200
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAHJ (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus haemolyticus (strain JCSC1435) GN=hrtA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 54/199 (27.14%), Postives = 93/199 (46.73%), Query Frame = 3 Query: 165 VTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737 +T G +L+ + GE + + G SG GKSTLL+ L G L ++ G++L G K +L ++ Q L+ LTV E + A+ + + + K++A+ + E+GL ++ LSGG+K+RV+I + PK++ DEPT+ LD+ + V+ I Q + +G Sbjct: 8 ITKTFGNGDAQTEVLKNINFSVNQGEFIILSGASGSGKSTLLNILGGLLSPSS---GDVLYKGENLFSKEVDKTSLRLNDIGFIFQSSHLVPYLTVREQLMIVAK---EAGIKRKEAKDKAQRLLNEIGLSHRLDVY-----PHLLSGGEKQRVAIMRAFMNEPKIILADEPTASLDADRATSVVQMIKAHVQTKNMIG 195
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC1_HAEIN (Fe(3+) ions import ATP-binding protein fbpC 1 OS=Haemophilus influenzae GN=fbpC1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 50/180 (27.78%), Postives = 89/180 (49.44%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 G ++ L + G ++ ++GPSGCGK+T+L +AG +G+I I+G K ++ V Q AL +++ + V Y ++Q + Q+ + A + G +D +I SGGQ++RV++ ++ +PK+L DEP S LD+ + +I +L QR Sbjct: 17 GKAVVIDNLDLTIKRGTMVTLLGPSGCGKTTVLRLVAGL---ENPTSGQIFIDGEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLKMQGIGKEERAQRVKEALELVDLAGFEDRFVDQI--------SGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMREKIRELQQR 185
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA_SYNY3 (Sulfate/thiosulfate import ATP-binding protein cysA OS=Synechocystis sp. (strain PCC 6803) GN=cysA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 62/210 (29.52%), Postives = 100/210 (47.62%), Query Frame = 3 Query: 111 NVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA---LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQL-PDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH 728 NV++ GD F +D+ + VPDG+ L+A++GPSG GKSTLL A+AG G+I+ING+ + +V Q AL LT+ + + + +++ P TK ER E + + L+ +G LSGGQ++RV++ + +P++L LDEP LD+ + + + KL H Sbjct: 7 NVSKQFGD--FTALKDINLEVPDGK-------------------LVALLGPSGSGKSTLLRAIAGL---EEPDQGQIIINGQDATHVDIRKRNIGFVFQHYALFKHLTIRQNIAFGLEIRKHPPAKTK----ERVEELLSLIQLEG-----LGNRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKELRAWLRKLHDEVH 183
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA_RALSO (Sulfate/thiosulfate import ATP-binding protein cysA OS=Ralstonia solanacearum GN=cysA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 55/168 (32.74%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAK----GLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674 GN L ++ R GEL A++GPSGCGK+TLL +A G AG IL+NG R + +V Q AL +TV E V + +++ + Q+ A++ K L + + W A+ LSGGQ++R+++ + P++L LDEP LD+ Sbjct: 13 GNFVALDDVSLAFRQGELTALLGPSGCGKTTLLRIIA---GLEHADAGTILLNGEDASDRHVRERQVGFVFQHYALFKHMTVFENVAFGLRVK-----PRAQRPSEAQIRAKVKALLELVQL---DWLAERYPPQLSGGQRQRIALARALAVEPRVLLLDEPFGALDA 169
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_BACCR (Aliphatic sulfonates import ATP-binding protein ssuB OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ssuB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 3 Query: 183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674 ++ G +L+ + G+ + ++GPSGCGKSTLL +A G + GE++I+G ++ Q+ L LTV E + +A L L D K + +E E+ ++ G + + K +SGG +RV+I +L P +L LDEP LD+ Sbjct: 14 KQTGTVQVLENINFQLEEGDFVTVIGPSGCGKSTLLKIVA---GLDNDFEGEVVIDGEPILKTSKKQGFIFQEHRLFPWLTVEENI--AADLSLKDKYVKDKVREWVEI-VRLDGFEKSY--------PKEISGGMSQRVAIARALLRDPNVLLLDEPFGALDA 163
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PSTB_FRASC (Phosphate import ATP-binding protein pstB OS=Frankia sp. (strain CcI3) GN=pstB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 57/172 (33.14%), Postives = 85/172 (49.42%), Query Frame = 3 Query: 234 PGELLAIMGPSGCGKSTLLDAL--AGRLGSNTRQAGEILINGRKRALAYG----------TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 P + A +GPSGCGKST+L L + R G++L++G YG T V Q T+++ E V A L+L K ER E +++ L + + R+G GA GLSGGQ++R+ I + P++L +DEP S LD ++ + IAKL Sbjct: 29 PKNVTAFIGPSGCGKSTVLRTLNRMHEVLPGARVEGQVLLDGED---LYGPGMDPVAVRRTVGMVFQRPNPFPTMSIYENVI--AGLKLNGVRKKALLDERVEESLRGANLWEEVKDRLGRPGA-GLSGGQQQRLCIARAIAVEPQVLLMDEPCSALDPISTLAIEDLIAKL 194
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_STRA5 (Spermidine/putrescine import ATP-binding protein potA OS=Streptococcus agalactiae serotype V GN=potA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 57/180 (31.67%), Postives = 96/180 (53.33%), Query Frame = 3 Query: 195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY----VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 N +L+ + G+ ++G SG GKST+L+ +AG L ++T G+I ++G KR T+ V Q+ AL +TV E V + +L+ M K + ++R + T+K + L+ I + LSGGQ++RV+I ++ +PK++ LDEP S LD + + +L QR Sbjct: 19 NTVVLKDINFELEEGKFYTLLGASGSGKSTILNIIAGLLEAST---GDIYLDG-KRINDVPTNKRDVHTVFQNYALFPHMTVFENVAFPLKLK---KMDKKEIQKRVQETLKMVRLEGFEKRAI-----QKLSGGQRQRVAIARAIINQPKVVLLDEPLSALDLKLRTEMQYELRELQQR 186
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_STRA3 (Spermidine/putrescine import ATP-binding protein potA OS=Streptococcus agalactiae serotype III GN=potA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 57/180 (31.67%), Postives = 96/180 (53.33%), Query Frame = 3 Query: 195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY----VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 N +L+ + G+ ++G SG GKST+L+ +AG L ++T G+I ++G KR T+ V Q+ AL +TV E V + +L+ M K + ++R + T+K + L+ I + LSGGQ++RV+I ++ +PK++ LDEP S LD + + +L QR Sbjct: 19 NTVVLKDINFELEEGKFYTLLGASGSGKSTILNIIAGLLEAST---GDIYLDG-KRINDVPTNKRDVHTVFQNYALFPHMTVFENVAFPLKLK---KMDKKEIQKRVQETLKMVRLEGFEKRAI-----QKLSGGQRQRVAIARAIINQPKVVLLDEPLSALDLKLRTEMQYELRELQQR 186
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_STRA1 (Spermidine/putrescine import ATP-binding protein potA OS=Streptococcus agalactiae serotype Ia GN=potA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 57/180 (31.67%), Postives = 96/180 (53.33%), Query Frame = 3 Query: 195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY----VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 N +L+ + G+ ++G SG GKST+L+ +AG L ++T G+I ++G KR T+ V Q+ AL +TV E V + +L+ M K + ++R + T+K + L+ I + LSGGQ++RV+I ++ +PK++ LDEP S LD + + +L QR Sbjct: 19 NTVVLKDINFELEEGKFYTLLGASGSGKSTILNIIAGLLEAST---GDIYLDG-KRINDVPTNKRDVHTVFQNYALFPHMTVFENVAFPLKLK---KMDKKEIQKRVQETLKMVRLEGFEKRAI-----QKLSGGQRQRVAIARAIINQPKVVLLDEPLSALDLKLRTEMQYELRELQQR 186 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |