CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACCR (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=potA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 55/168 (32.74%), Postives = 87/168 (51.79%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671 GN+ I+ L+ + GE L I+GPSGCGK+TLL +A G T G +L++ KR + V Q AL +TV + + + ++Q ++ ++KERAE ++ L + N + LSGGQ++RV+I ++ P++L LDEP LD Sbjct: 15 GNQVIIPPLSLDIKEGEFLTILGPSGCGKTTLLRMIA---GFETPTKGNLLLDDERINDLPPYKRHM-----NLVFQHYALFPHMTVEKNICFGMKMQ---KVSAAEQKERAEEAMRLTQLLEFRNRK-----PAKLSGGQQQRVAIARAIVNNPRVLLLDEPLGALD 166
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_SHIFL (Phosphonates import ATP-binding protein phnC OS=Shigella flexneri GN=phnC PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 56/194 (28.87%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 240 ELLAIMGPSGCGKSTLLDALAGR-------------LGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 E++A++GPSG GKSTLL L+G LG ++ G + + RK + + Y+ Q L+ L+V E V A P T ++K+RA + +G+ + R+ LSGGQ++RV+I ++ + K++ DEP + LD ++ VM + ++Q D G+ T++ ++HQ Sbjct: 31 EMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRK---SRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTGEQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GI---TVVVTLHQ 212
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_SHIF8 (Phosphonates import ATP-binding protein phnC OS=Shigella flexneri serotype 5b (strain 8401) GN=phnC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 56/194 (28.87%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 240 ELLAIMGPSGCGKSTLLDALAGR-------------LGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 E++A++GPSG GKSTLL L+G LG ++ G + + RK + + Y+ Q L+ L+V E V A P T ++K+RA + +G+ + R+ LSGGQ++RV+I ++ + K++ DEP + LD ++ VM + ++Q D G+ T++ ++HQ Sbjct: 31 EMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRK---SRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTGEQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GI---TVVVTLHQ 212
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_SHIBS (Phosphonates import ATP-binding protein phnC OS=Shigella boydii serotype 4 (strain Sb227) GN=phnC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 55/193 (28.50%), Postives = 98/193 (50.78%), Query Frame = 3 Query: 240 ELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR------------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 E++A++GPSG GKSTLL L+G + + I + GR +++ A+ + Y+ Q L+ L+V E V A P T ++K+RA + +G+ + R+ LSGGQ++RV+I ++ + K++ DEP + LD ++ VM + ++Q D G+ T++ ++HQ Sbjct: 31 EMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRAH--TGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GI---TVVVTLHQ 212
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC2_RALEH (Phosphonates import ATP-binding protein phnC 2 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phnC2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 59/208 (28.37%), Postives = 100/208 (48.08%), Query Frame = 3 Query: 189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING----------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEM-----TIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 + +R L +T + PGE++A++G SG GKSTLL +AG + + AGEIL+NG R G +V Q L+ L V V ++P + L+ + E+ + ++G+ D R A LSGGQ++R +I ++ ++ DEP + LD +S VMS + ++++ ++ S+HQ Sbjct: 15 RADRKALDDVTLHIAPGEMVALLGASGSGKSTLLRHVAGFI-TGDAGAGEILVNGRHVQRNGRLARNVRKVRGEIGFVFQQFNLVGRLPVITNVLVGTLARVPKWRSLLRIFKADEVQGGLDALAQVGIDDYAFQR-----ASTLSGGQQQRAAIARTLVQNASVILADEPIASLDPESSRRVMSLLRQINR----TRKVAVLVSLHQ 212
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC1_RHOPB (Phosphonates import ATP-binding protein phnC 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=phnC1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 60/188 (31.91%), Postives = 93/188 (49.47%), Query Frame = 3 Query: 189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRL--GSNTRQAGEILING------RKRALAYGTSAYVTQDDALITTLTVSEAVY-----YSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 K + L+G++ GE++ ++GPSG GKSTL+ + + S Q GE+ + G R+ G + Q+ ALI LTV E V Y+ Q +RA ++ +GL D ++ R A LSGGQ++RV I ++ +P+LL +DEPT+ LD S VM + +L Sbjct: 12 KNGEAALRGVSLSVGAGEIIGLIGPSGAGKSTLIRCVNRLIEPSSGRVQLGEVELTGLSSGALRRERRRIGM---IFQEYALIERLTVMENVLAGRLGYTGFWNSWFRRFAEQDIQRAIALLERVGLIDHIDKR-----ADALSGGQRQRVGIARALIQQPELLLVDEPTASLDPKTSRSVMRLLTEL 191
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: NODI_AZOC5 (Nod factor export ATP-binding protein I OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=nodI PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 55/196 (28.06%), Postives = 93/196 (47.45%), Query Frame = 3 Query: 183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING----RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIAS 758 +K+G +L+GL Y R GE IMG +G GKS+L++ + LG G + + G R+ LA V QDD L +T E V +L MT + ++RA+ ++ + D N + + LSGG +R + ++ P ++ LDE T GLD+ + + +I + + G+ ++ S Sbjct: 22 KKRGGIDVLRGLDMYVRRGERYGIMGTNGAGKSSLINII---LGLTPPDRGTVTVFGKDMRRQGHLARARIGVVPQDDCLEQNMTPYENVMLYGRL---CRMTASEARKRADQIFEKFSMMDCANRPV-----RLLSGGMRRLTMVARALVNDPYVIILDEATVGLDAKSRSALWQQI----EASNATGATVLVIS 202
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_HAHCH (Macrolide export ATP-binding/permease protein macB OS=Hahella chejuensis (strain KCTC 2396) GN=macB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 58/188 (30.85%), Postives = 97/188 (51.60%), Query Frame = 3 Query: 234 PGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKR---------ALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770 PGE++AIMG SG GKSTL++ L G L + +G I+GR+ AL ++ Q L++ L +A+ + + ++K ++ERA M + +GL++ + LSGGQ++RVSI ++ +++ DEPT LD+ + VM+ + +L Q+ H T+I H P Sbjct: 34 PGEMVAIMGTSGSGKSTLMNIL-GCL--DRPSSGSYRISGRETRELDDNELAALRRNHFGFIFQRYHLLSHL---DALGNAELAAVYAGVSKSSRRERAHMLLSRLGLEERCEHK-----PSQLSGGQQQRVSIARALMNGGEVILADEPTGALDTRSGQEVMAVLRELHQQGH-----TVIIVTHDP 205
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_AGGAC (Macrolide export ATP-binding/permease protein macB OS=Aggregatibacter actinomycetemcomitans GN=macB PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 56/192 (29.17%), Postives = 98/192 (51.04%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEI-------LINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734 G+ + +L+ ++ G+ +AIMG SG GKSTL++ + G L + T + +I L N + L ++ Q L+++LT +E V A + M + Q+ ERA+ ++++GL D + LSGGQ++RVSI ++ +++ DEPT LDS + VM + +L + H + Sbjct: 14 GEGENRVHVLKDISLSIERGDFVAIMGQSGSGKSTLMNII-GCLDTATGGSSKIDGKETIELTNDQLSDLRSQKFGFIFQRYNLLSSLTAAENVALPA---IYAGMPQSQRLERAKQLLEKLGLGDKWQNK-----PNQLSGGQQQRVSIARALMNGGEIILADEPTGALDSHSGENVMEILRQLHEEGHTI 196
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB2_YERPN (Macrolide export ATP-binding/permease protein macB 2 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=macB2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNT----RQAGEI---LINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773 +LQ ++ GEL+AI+G SG GKSTL++ L G L + R AG+ L + AL ++ Q L+ L+ + V A + K +++ERA M + +GL D ++ + LSGGQ++RVSI ++ +++ DEPT LDS +S VM+ + +L Q+ H T+I H P+ Sbjct: 23 VLQDVSLTINAGELVAIIGASGSGKSTLMNIL-GCLDKPSAGIYRVAGQNVDELDDDALAALRREHFGFIFQRYHLLPHLSAAHNVEVPAVYA---GLGKHERRERANMLLTRLGLGDRVS-----YQPNQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSSVEVMAILKQLQQQGH-----TVIIVTHDPT 205 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |