CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACCR (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=potA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 55/168 (32.74%), Postives = 87/168 (51.79%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671
            GN+ I+  L+   + GE L I+GPSGCGK+TLL  +A   G  T   G +L++          KR +       V Q  AL   +TV + + +  ++Q    ++  ++KERAE  ++   L +  N +        LSGGQ++RV+I   ++  P++L LDEP   LD
Sbjct:   15 GNQVIIPPLSLDIKEGEFLTILGPSGCGKTTLLRMIA---GFETPTKGNLLLDDERINDLPPYKRHM-----NLVFQHYALFPHMTVEKNICFGMKMQ---KVSAAEQKERAEEAMRLTQLLEFRNRK-----PAKLSGGQQQRVAIARAIVNNPRVLLLDEPLGALD 166          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_SHIFL (Phosphonates import ATP-binding protein phnC OS=Shigella flexneri GN=phnC PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 56/194 (28.87%), Postives = 97/194 (50.00%), Query Frame = 3
Query:  240 ELLAIMGPSGCGKSTLLDALAGR-------------LGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            E++A++GPSG GKSTLL  L+G              LG   ++ G +  + RK   +   + Y+ Q   L+  L+V E V   A    P   T       ++K+RA   +  +G+    + R+       LSGGQ++RV+I   ++ + K++  DEP + LD  ++  VM  +  ++Q D G+   T++ ++HQ
Sbjct:   31 EMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRK---SRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTGEQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GI---TVVVTLHQ 212          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_SHIF8 (Phosphonates import ATP-binding protein phnC OS=Shigella flexneri serotype 5b (strain 8401) GN=phnC PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 56/194 (28.87%), Postives = 97/194 (50.00%), Query Frame = 3
Query:  240 ELLAIMGPSGCGKSTLLDALAGR-------------LGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            E++A++GPSG GKSTLL  L+G              LG   ++ G +  + RK   +   + Y+ Q   L+  L+V E V   A    P   T       ++K+RA   +  +G+    + R+       LSGGQ++RV+I   ++ + K++  DEP + LD  ++  VM  +  ++Q D G+   T++ ++HQ
Sbjct:   31 EMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRK---SRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTGEQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GI---TVVVTLHQ 212          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_SHIBS (Phosphonates import ATP-binding protein phnC OS=Shigella boydii serotype 4 (strain Sb227) GN=phnC PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 55/193 (28.50%), Postives = 98/193 (50.78%), Query Frame = 3
Query:  240 ELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR------------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            E++A++GPSG GKSTLL  L+G +  +      I + GR            +++ A+  + Y+ Q   L+  L+V E V   A    P   T       ++K+RA   +  +G+    + R+       LSGGQ++RV+I   ++ + K++  DEP + LD  ++  VM  +  ++Q D G+   T++ ++HQ
Sbjct:   31 EMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRAH--TGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GI---TVVVTLHQ 212          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC2_RALEH (Phosphonates import ATP-binding protein phnC 2 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phnC2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 59/208 (28.37%), Postives = 100/208 (48.08%), Query Frame = 3
Query:  189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING----------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEM-----TIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            + +R  L  +T +  PGE++A++G SG GKSTLL  +AG + +    AGEIL+NG          R      G   +V Q   L+  L V   V      ++P   + L+  +  E+      + ++G+ D    R     A  LSGGQ++R +I   ++    ++  DEP + LD  +S  VMS + ++++         ++ S+HQ
Sbjct:   15 RADRKALDDVTLHIAPGEMVALLGASGSGKSTLLRHVAGFI-TGDAGAGEILVNGRHVQRNGRLARNVRKVRGEIGFVFQQFNLVGRLPVITNVLVGTLARVPKWRSLLRIFKADEVQGGLDALAQVGIDDYAFQR-----ASTLSGGQQQRAAIARTLVQNASVILADEPIASLDPESSRRVMSLLRQINR----TRKVAVLVSLHQ 212          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC1_RHOPB (Phosphonates import ATP-binding protein phnC 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=phnC1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 60/188 (31.91%), Postives = 93/188 (49.47%), Query Frame = 3
Query:  189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRL--GSNTRQAGEILING------RKRALAYGTSAYVTQDDALITTLTVSEAVY-----YSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713
            K   + L+G++     GE++ ++GPSG GKSTL+  +   +   S   Q GE+ + G      R+     G    + Q+ ALI  LTV E V      Y+            Q  +RA   ++ +GL D ++ R     A  LSGGQ++RV I   ++ +P+LL +DEPT+ LD   S  VM  + +L
Sbjct:   12 KNGEAALRGVSLSVGAGEIIGLIGPSGAGKSTLIRCVNRLIEPSSGRVQLGEVELTGLSSGALRRERRRIGM---IFQEYALIERLTVMENVLAGRLGYTGFWNSWFRRFAEQDIQRAIALLERVGLIDHIDKR-----ADALSGGQRQRVGIARALIQQPELLLVDEPTASLDPKTSRSVMRLLTEL 191          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: NODI_AZOC5 (Nod factor export ATP-binding protein I OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=nodI PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 55/196 (28.06%), Postives = 93/196 (47.45%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING----RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIAS 758
            +K+G   +L+GL  Y R GE   IMG +G GKS+L++ +   LG      G + + G    R+  LA      V QDD L   +T  E V    +L     MT  + ++RA+   ++  + D  N  +     + LSGG +R   +   ++  P ++ LDE T GLD+ +   +  +I    +  +  G+  ++ S
Sbjct:   22 KKRGGIDVLRGLDMYVRRGERYGIMGTNGAGKSSLINII---LGLTPPDRGTVTVFGKDMRRQGHLARARIGVVPQDDCLEQNMTPYENVMLYGRL---CRMTASEARKRADQIFEKFSMMDCANRPV-----RLLSGGMRRLTMVARALVNDPYVIILDEATVGLDAKSRSALWQQI----EASNATGATVLVIS 202          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_HAHCH (Macrolide export ATP-binding/permease protein macB OS=Hahella chejuensis (strain KCTC 2396) GN=macB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 58/188 (30.85%), Postives = 97/188 (51.60%), Query Frame = 3
Query:  234 PGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKR---------ALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770
            PGE++AIMG SG GKSTL++ L G L  +   +G   I+GR+          AL      ++ Q   L++ L   +A+  +    +   ++K  ++ERA M +  +GL++    +        LSGGQ++RVSI   ++   +++  DEPT  LD+ +   VM+ + +L Q+ H     T+I   H P
Sbjct:   34 PGEMVAIMGTSGSGKSTLMNIL-GCL--DRPSSGSYRISGRETRELDDNELAALRRNHFGFIFQRYHLLSHL---DALGNAELAAVYAGVSKSSRRERAHMLLSRLGLEERCEHK-----PSQLSGGQQQRVSIARALMNGGEVILADEPTGALDTRSGQEVMAVLRELHQQGH-----TVIIVTHDP 205          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_AGGAC (Macrolide export ATP-binding/permease protein macB OS=Aggregatibacter actinomycetemcomitans GN=macB PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 56/192 (29.17%), Postives = 98/192 (51.04%), Query Frame = 3
Query:  180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEI-------LINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734
            G+ +    +L+ ++     G+ +AIMG SG GKSTL++ + G L + T  + +I       L N +   L      ++ Q   L+++LT +E V   A   +   M + Q+ ERA+  ++++GL D    +        LSGGQ++RVSI   ++   +++  DEPT  LDS +   VM  + +L +  H +
Sbjct:   14 GEGENRVHVLKDISLSIERGDFVAIMGQSGSGKSTLMNII-GCLDTATGGSSKIDGKETIELTNDQLSDLRSQKFGFIFQRYNLLSSLTAAENVALPA---IYAGMPQSQRLERAKQLLEKLGLGDKWQNK-----PNQLSGGQQQRVSIARALMNGGEIILADEPTGALDSHSGENVMEILRQLHEEGHTI 196          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB2_YERPN (Macrolide export ATP-binding/permease protein macB 2 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=macB2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNT----RQAGEI---LINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773
            +LQ ++     GEL+AI+G SG GKSTL++ L G L   +    R AG+    L +    AL      ++ Q   L+  L+ +  V   A       + K +++ERA M +  +GL D ++     +    LSGGQ++RVSI   ++   +++  DEPT  LDS +S  VM+ + +L Q+ H     T+I   H P+
Sbjct:   23 VLQDVSLTINAGELVAIIGASGSGKSTLMNIL-GCLDKPSAGIYRVAGQNVDELDDDALAALRREHFGFIFQRYHLLPHLSAAHNVEVPAVYA---GLGKHERRERANMLLTRLGLGDRVS-----YQPNQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSSVEVMAILKQLQQQGH-----TVIIVTHDPT 205          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
POTA_BACCR1.883e-1232.74Spermidine/putrescine import ATP-binding protein p... [more]
PHNC_SHIFL1.883e-1228.87Phosphonates import ATP-binding protein phnC OS=Sh... [more]
PHNC_SHIF81.883e-1228.87Phosphonates import ATP-binding protein phnC OS=Sh... [more]
PHNC_SHIBS1.883e-1228.50Phosphonates import ATP-binding protein phnC OS=Sh... [more]
PHNC2_RALEH1.883e-1228.37Phosphonates import ATP-binding protein phnC 2 OS=... [more]
PHNC1_RHOPB1.883e-1231.91Phosphonates import ATP-binding protein phnC 1 OS=... [more]
NODI_AZOC51.883e-1228.06Nod factor export ATP-binding protein I OS=Azorhiz... [more]
MACB_HAHCH1.883e-1230.85Macrolide export ATP-binding/permease protein macB... [more]
MACB_AGGAC1.883e-1229.17Macrolide export ATP-binding/permease protein macB... [more]
MACB2_YERPN1.883e-1231.98Macrolide export ATP-binding/permease protein macB... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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