CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB1_YERPS (Macrolide export ATP-binding/permease protein macB 1 OS=Yersinia pseudotuberculosis GN=macB1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNT----RQAGEI---LINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773 +LQ ++ GEL+AI+G SG GKSTL++ L G L + R AG+ L + AL ++ Q L+ L+ + V A + K +++ERA M + +GL D ++ + LSGGQ++RVSI ++ +++ DEPT LDS +S VM+ + +L Q+ H T+I H P+ Sbjct: 23 VLQDVSLTINAGELVAIIGASGSGKSTLMNIL-GCLDKPSAGIYRVAGQNVDELDDDALAALRREHFGFIFQRYHLLPHLSAAHNVEVPAVYA---GLGKHERRERANMLLTRLGLGDRVS-----YQPNQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSSVEVMAILKQLQQQGH-----TVIIVTHDPT 205
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB1_YERPE (Macrolide export ATP-binding/permease protein macB 1 OS=Yersinia pestis GN=macB1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNT----RQAGEI---LINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773 +LQ ++ GEL+AI+G SG GKSTL++ L G L + R AG+ L + AL ++ Q L+ L+ + V A + K +++ERA M + +GL D ++ + LSGGQ++RVSI ++ +++ DEPT LDS +S VM+ + +L Q+ H T+I H P+ Sbjct: 23 VLQDVSLTINAGELVAIIGASGSGKSTLMNIL-GCLDKPSAGIYRVAGQNVDELDDDALAALRREHFGFIFQRYHLLPHLSAAHNVEVPAVYA---GLGKHERRERANMLLTRLGLGDRVS-----YQPNQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSSVEVMAILKQLQQQGH-----TVIIVTHDPT 205
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB1_YERPA (Macrolide export ATP-binding/permease protein macB 1 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=macB1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNT----RQAGEI---LINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773 +LQ ++ GEL+AI+G SG GKSTL++ L G L + R AG+ L + AL ++ Q L+ L+ + V A + K +++ERA M + +GL D ++ + LSGGQ++RVSI ++ +++ DEPT LDS +S VM+ + +L Q+ H T+I H P+ Sbjct: 23 VLQDVSLTINAGELVAIIGASGSGKSTLMNIL-GCLDKPSAGIYRVAGQNVDELDDDALAALRREHFGFIFQRYHLLPHLSAAHNVEVPAVYA---GLGKHERRERANMLLTRLGLGDRVS-----YQPNQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSSVEVMAILKQLQQQGH-----TVIIVTHDPT 205
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAES (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=hrtA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 50/195 (25.64%), Postives = 100/195 (51.28%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKE---------RAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737 G+K +L+ + + GE + + G SG GK+TLL L G L ++ +G+++ G+ + A++ +D + +A + L++ D +T + K+ RA+ + ++GL++ +N+ LSGGQ++RV+I ++ PK++ DEPT+ LD++ + V+ I K + + +G Sbjct: 13 GEKSSKTEVLKDINFEVKDGEFIILNGASGSGKTTLLTILGGLL---SQTSGDVVYEGKSLFERHTNKAHLRLNDIGF----IFQASHLVPYLKVLDQLTLIGKEAGMSSKEAQARAKELLTKIGLEEQLNSY-----PHMLSGGQQQRVAIMRALMNHPKIVLADEPTASLDASRAQEVVEMIRKQIKANQMIG 195
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC1_ERWCT (Fe(3+) ions import ATP-binding protein fbpC 1 OS=Erwinia carotovora subsp. atroseptica GN=fbpC1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 52/180 (28.89%), Postives = 92/180 (51.11%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 GN +++ L G+++ ++GPSGCGK+T+L A+AG L T G+I I+G +R++ V Q AL +++ E + Y ++ Q+ + A + G +D +I SGGQ++RV++ ++ +PK+L DEP S LD+ + +I +L Q+ Sbjct: 21 GNNTVIDDLNLAIPQGKMVTLLGPSGCGKTTVLRAVAG-LEKPTE--GQIFIDGEDVTERSIQQRDICMVFQSYALFPHMSLGENIGYGLKMLGRPKAEINQRVKEALALVDLEGFEDRYVDQI--------SGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQ 189
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA_CAUCR (Sulfate/thiosulfate import ATP-binding protein cysA OS=Caulobacter crescentus GN=cysA PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQL-PDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674 GELLA++GPSG GK+TLL +AG AG++L +G+ A + +V Q AL +TV++ + + ++ D +K + R E +K + L+ +GG LSGGQ++RV++ + +P +L LDEP LD+ Sbjct: 28 GELLALLGPSGSGKTTLLRTIAGL---EFPDAGQVLFDGQDVTYASAAARRVGFVFQQYALFKHMTVAKNIAFGLDVRKGKDKPSKAEIARRVEELLKLVELEG-----LGGRYPSQLSGGQRQRVALSRALAVQPSVLLLDEPFGALDA 169
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCBB_RABIT (Bile salt export pump OS=Oryctolagus cuniculus GN=ABCB11 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 54/192 (28.12%), Postives = 95/192 (49.48%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY-VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 IL L+ +PGE+ A++GPSG GKST L + G + R + + + + + + ++ T++E + Y + + + + K+ A I M L +T +G G + +SGGQK+RV+I ++ PK+L LD TS LD+ + V ++K HG TI++ H+P++ Sbjct: 437 ILNNLSMVIKPGEMTALVGPSGAGKSTALQLIHRFYGPTEGMVTVESHDIRSSHIQWLRNQIGIVEQEPVLFFHTIAEKIRYGREDATMEDLIQAAKEANAYNFI--MDLPQQFDTLVGEGGGQ-MSGGQKQRVAIARALIRNPKILLLDMATSALDNESEAMVQEALSK---TQHG---HTIVSVAHRPAT 619
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YRIBC_METTM (Putative ABC transporter ATP-binding protein in ribC 5'region OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12 Identity = 56/210 (26.67%), Postives = 101/210 (48.10%), Query Frame = 3 Query: 168 TVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYV-----------TQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 T PDG + L+G+ +A+ GE++A++GP+G GKSTL G L + G++L++G++ + Y S + DD L + + + L + + +ER + ++++G+ LSGG+K+RV+I + +P ++ LDEPTSGLD + ++ + +L++ TII S H Sbjct: 12 TYPDGTEA-----LKGIDFHAKKGEVVALLGPNGAGKSTLFLHFNGILQPTS---GKVLVDGKE--IDYSKSGLIKVRQKVGIVFQNPDDQLFAPRVDEDVAFGPLNMGLDED----EVEERVKDALRKVGMSGTRTD------PHHLSGGEKKRVAIAGILAMKPDIMILDEPTSGLDPRGASQILRLLHELNEE-----GMTIIISTH 196
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y467_MYCGE (Putative ABC transporter ATP-binding protein MG467 OS=Mycoplasma genitalium GN=MG467 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12 Identity = 67/238 (28.15%), Postives = 112/238 (47.06%), Query Frame = 3 Query: 48 ISRAFEVVESSSNNKTATHSINVNE--DDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAG----RLGSNT-------RQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAE-MTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 I +A ++ +N K +++ + G+ +T +W V + K SIL ++ GE++ I+G SG GK+TLL+ + G LGS + E L+ RK L Y V Q LI L+ + + S L +P +L +E AE + IKE+ + +SGGQK+RV+I ++ PKLL DEPT LDS ++ +++ + +++ Sbjct: 50 IKKAELKLKKKANKKQKANTLYIPPFAQQAKGIVITINKMWKNVHNDDSKQEISILSDVSLQIAYGEIVIILGSSGSGKTTLLNLIGGYDSISLGSCIVANCPLEKCTSEQLLTYRKNNLGY-----VYQRYNLIELLSAYDNIAISQNL-IPKYQRRLDIEELAEKLDIKEILYKFPYE----------MSGGQKQRVAIARAIIKEPKLLLCDEPTGALDSNSAENIINLLQTINK 271
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: UGPC_BORPA (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Bordetella parapertussis GN=ugpC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12 Identity = 56/180 (31.11%), Postives = 91/180 (50.56%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 GN ++ G GE + I+GPSGCGKSTL+ +A G T GEILI+ + A A V Q+ AL ++V + + Y +++ + K + ++R E + + L ++ R + LSGGQ++RV++ ++ PK+ DEP S LD+ + I KL +R Sbjct: 15 GNVPVIHGSDMDVADGEFIVIVGPSGCGKSTLMRMVA---GLETVTEGEILIDDKVVNTLEPAERDIAMVFQNYALYPHMSVFDNMAYGLKIR---RLPKDEIRKRVEAAAQILELGKLLDRR-----PRALSGGQRQRVAMGRAIVREPKVFLFDEPLSNLDAKLRVAMRLEILKLHRR 183 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |