CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB1_YERPS (Macrolide export ATP-binding/permease protein macB 1 OS=Yersinia pseudotuberculosis GN=macB1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNT----RQAGEI---LINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773
            +LQ ++     GEL+AI+G SG GKSTL++ L G L   +    R AG+    L +    AL      ++ Q   L+  L+ +  V   A       + K +++ERA M +  +GL D ++     +    LSGGQ++RVSI   ++   +++  DEPT  LDS +S  VM+ + +L Q+ H     T+I   H P+
Sbjct:   23 VLQDVSLTINAGELVAIIGASGSGKSTLMNIL-GCLDKPSAGIYRVAGQNVDELDDDALAALRREHFGFIFQRYHLLPHLSAAHNVEVPAVYA---GLGKHERRERANMLLTRLGLGDRVS-----YQPNQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSSVEVMAILKQLQQQGH-----TVIIVTHDPT 205          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB1_YERPE (Macrolide export ATP-binding/permease protein macB 1 OS=Yersinia pestis GN=macB1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNT----RQAGEI---LINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773
            +LQ ++     GEL+AI+G SG GKSTL++ L G L   +    R AG+    L +    AL      ++ Q   L+  L+ +  V   A       + K +++ERA M +  +GL D ++     +    LSGGQ++RVSI   ++   +++  DEPT  LDS +S  VM+ + +L Q+ H     T+I   H P+
Sbjct:   23 VLQDVSLTINAGELVAIIGASGSGKSTLMNIL-GCLDKPSAGIYRVAGQNVDELDDDALAALRREHFGFIFQRYHLLPHLSAAHNVEVPAVYA---GLGKHERRERANMLLTRLGLGDRVS-----YQPNQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSSVEVMAILKQLQQQGH-----TVIIVTHDPT 205          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB1_YERPA (Macrolide export ATP-binding/permease protein macB 1 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=macB1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNT----RQAGEI---LINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773
            +LQ ++     GEL+AI+G SG GKSTL++ L G L   +    R AG+    L +    AL      ++ Q   L+  L+ +  V   A       + K +++ERA M +  +GL D ++     +    LSGGQ++RVSI   ++   +++  DEPT  LDS +S  VM+ + +L Q+ H     T+I   H P+
Sbjct:   23 VLQDVSLTINAGELVAIIGASGSGKSTLMNIL-GCLDKPSAGIYRVAGQNVDELDDDALAALRREHFGFIFQRYHLLPHLSAAHNVEVPAVYA---GLGKHERRERANMLLTRLGLGDRVS-----YQPNQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSSVEVMAILKQLQQQGH-----TVIIVTHDPT 205          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAES (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=hrtA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 50/195 (25.64%), Postives = 100/195 (51.28%), Query Frame = 3
Query:  180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKE---------RAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737
            G+K     +L+ +    + GE + + G SG GK+TLL  L G L   ++ +G+++  G+     +   A++  +D       + +A +    L++ D +T + K+          RA+  + ++GL++ +N+         LSGGQ++RV+I   ++  PK++  DEPT+ LD++ +  V+  I K  + +  +G
Sbjct:   13 GEKSSKTEVLKDINFEVKDGEFIILNGASGSGKTTLLTILGGLL---SQTSGDVVYEGKSLFERHTNKAHLRLNDIGF----IFQASHLVPYLKVLDQLTLIGKEAGMSSKEAQARAKELLTKIGLEEQLNSY-----PHMLSGGQQQRVAIMRALMNHPKIVLADEPTASLDASRAQEVVEMIRKQIKANQMIG 195          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC1_ERWCT (Fe(3+) ions import ATP-binding protein fbpC 1 OS=Erwinia carotovora subsp. atroseptica GN=fbpC1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 52/180 (28.89%), Postives = 92/180 (51.11%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            GN +++  L      G+++ ++GPSGCGK+T+L A+AG L   T   G+I I+G    +R++       V Q  AL   +++ E + Y  ++         Q+ + A   +   G +D    +I        SGGQ++RV++   ++ +PK+L  DEP S LD+     +  +I +L Q+
Sbjct:   21 GNNTVIDDLNLAIPQGKMVTLLGPSGCGKTTVLRAVAG-LEKPTE--GQIFIDGEDVTERSIQQRDICMVFQSYALFPHMSLGENIGYGLKMLGRPKAEINQRVKEALALVDLEGFEDRYVDQI--------SGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQ 189          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA_CAUCR (Sulfate/thiosulfate import ATP-binding protein cysA OS=Caulobacter crescentus GN=cysA PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQL-PDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            GELLA++GPSG GK+TLL  +AG        AG++L +G+    A   +    +V Q  AL   +TV++ + +   ++   D  +K +   R E  +K + L+      +GG     LSGGQ++RV++   +  +P +L LDEP   LD+
Sbjct:   28 GELLALLGPSGSGKTTLLRTIAGL---EFPDAGQVLFDGQDVTYASAAARRVGFVFQQYALFKHMTVAKNIAFGLDVRKGKDKPSKAEIARRVEELLKLVELEG-----LGGRYPSQLSGGQRQRVALSRALAVQPSVLLLDEPFGALDA 169          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCBB_RABIT (Bile salt export pump OS=Oryctolagus cuniculus GN=ABCB11 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 54/192 (28.12%), Postives = 95/192 (49.48%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY-VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            IL  L+   +PGE+ A++GPSG GKST L  +    G           + R   + +  +   + + + ++   T++E + Y  +    + + +  K+  A   I  M L    +T +G  G + +SGGQK+RV+I   ++  PK+L LD  TS LD+ +   V   ++K     HG    TI++  H+P++
Sbjct:  437 ILNNLSMVIKPGEMTALVGPSGAGKSTALQLIHRFYGPTEGMVTVESHDIRSSHIQWLRNQIGIVEQEPVLFFHTIAEKIRYGREDATMEDLIQAAKEANAYNFI--MDLPQQFDTLVGEGGGQ-MSGGQKQRVAIARALIRNPKILLLDMATSALDNESEAMVQEALSK---TQHG---HTIVSVAHRPAT 619          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YRIBC_METTM (Putative ABC transporter ATP-binding protein in ribC 5'region OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 56/210 (26.67%), Postives = 101/210 (48.10%), Query Frame = 3
Query:  168 TVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYV-----------TQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764
            T PDG +      L+G+  +A+ GE++A++GP+G GKSTL     G L   +   G++L++G++  + Y  S  +             DD L       +  +    + L +     + +ER +  ++++G+               LSGG+K+RV+I   +  +P ++ LDEPTSGLD   +  ++  + +L++        TII S H
Sbjct:   12 TYPDGTEA-----LKGIDFHAKKGEVVALLGPNGAGKSTLFLHFNGILQPTS---GKVLVDGKE--IDYSKSGLIKVRQKVGIVFQNPDDQLFAPRVDEDVAFGPLNMGLDED----EVEERVKDALRKVGMSGTRTD------PHHLSGGEKKRVAIAGILAMKPDIMILDEPTSGLDPRGASQILRLLHELNEE-----GMTIIISTH 196          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y467_MYCGE (Putative ABC transporter ATP-binding protein MG467 OS=Mycoplasma genitalium GN=MG467 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 67/238 (28.15%), Postives = 112/238 (47.06%), Query Frame = 3
Query:   48 ISRAFEVVESSSNNKTATHSINVNE--DDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAG----RLGSNT-------RQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAE-MTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            I +A   ++  +N K   +++ +        G+ +T   +W  V +   K   SIL  ++     GE++ I+G SG GK+TLL+ + G     LGS         +   E L+  RK  L Y     V Q   LI  L+  + +  S  L +P    +L  +E AE + IKE+  +              +SGGQK+RV+I   ++  PKLL  DEPT  LDS ++  +++ +  +++
Sbjct:   50 IKKAELKLKKKANKKQKANTLYIPPFAQQAKGIVITINKMWKNVHNDDSKQEISILSDVSLQIAYGEIVIILGSSGSGKTTLLNLIGGYDSISLGSCIVANCPLEKCTSEQLLTYRKNNLGY-----VYQRYNLIELLSAYDNIAISQNL-IPKYQRRLDIEELAEKLDIKEILYKFPYE----------MSGGQKQRVAIARAIIKEPKLLLCDEPTGALDSNSAENIINLLQTINK 271          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: UGPC_BORPA (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Bordetella parapertussis GN=ugpC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 56/180 (31.11%), Postives = 91/180 (50.56%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            GN  ++ G       GE + I+GPSGCGKSTL+  +A   G  T   GEILI+ +       A    A V Q+ AL   ++V + + Y  +++    + K + ++R E   + + L   ++ R      + LSGGQ++RV++   ++  PK+   DEP S LD+     +   I KL +R
Sbjct:   15 GNVPVIHGSDMDVADGEFIVIVGPSGCGKSTLMRMVA---GLETVTEGEILIDDKVVNTLEPAERDIAMVFQNYALYPHMSVFDNMAYGLKIR---RLPKDEIRKRVEAAAQILELGKLLDRR-----PRALSGGQRQRVAMGRAIVREPKVFLFDEPLSNLDAKLRVAMRLEILKLHRR 183          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MACB1_YERPS1.883e-1231.98Macrolide export ATP-binding/permease protein macB... [more]
MACB1_YERPE1.883e-1231.98Macrolide export ATP-binding/permease protein macB... [more]
MACB1_YERPA1.883e-1231.98Macrolide export ATP-binding/permease protein macB... [more]
HRTA_STAES1.883e-1225.64Putative hemin import ATP-binding protein hrtA OS=... [more]
FBPC1_ERWCT1.883e-1228.89Fe(3+) ions import ATP-binding protein fbpC 1 OS=E... [more]
CYSA_CAUCR1.883e-1233.33Sulfate/thiosulfate import ATP-binding protein cys... [more]
ABCBB_RABIT1.883e-1228.13Bile salt export pump OS=Oryctolagus cuniculus GN=... [more]
YRIBC_METTM2.459e-1226.67Putative ABC transporter ATP-binding protein in ri... [more]
Y467_MYCGE2.459e-1228.15Putative ABC transporter ATP-binding protein MG467... [more]
UGPC_BORPA2.459e-1231.11sn-glycerol-3-phosphate import ATP-binding protein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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