CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB2_AGRT5 (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ssuB2 PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 57/176 (32.39%), Postives = 89/176 (50.57%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHG 731
            +L+GL+     G+ L+I+G SGCGKSTLL  +A      T   G I I+G   +   G    + QD  L+   TV + +     + LP+       + RA   + E+GL +  +     W ++ LSGGQ++RV++   ++ RP+LL LDEP   LD+     +   I  +  R HG
Sbjct:   31 VLKGLSLNVPAGQFLSIVGRSGCGKSTLLRLIADL---ETIDGGTIQIDGNPLSEISGEVRMMFQDARLLPWRTVLQNI----GIGLPNPW-----QNRARKALAEVGLSEHADK----WPSQ-LSGGQRQRVALARALIHRPRLLLLDEPLGALDALTRLEMQDLIESIRAR-HG 188          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB1_PSEAE (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Pseudomonas aeruginosa GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 63/197 (31.98%), Postives = 93/197 (47.21%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782
            G R +L+ +      G+ +AI+G SGCGKSTLL  LAG L   +R  GE+L      A A   +  + QD  L+    V + V             +   + +A   ++ +GL +  N     W A  LSGGQK+RV++   ++  P+LL LDEP   LD+     +   I  L  R+HG    T++   H  S  V
Sbjct:   31 GEREVLKDIDLLVPAGQFVAIVGRSGCGKSTLLRLLAG-LDQPSR--GELLAGSAALAEAREDTRLMFQDSRLLPWKRVIDNVGLG---------LRGDWRAKALQALRAVGLAERANE----WPA-ALSGGQKQRVALARALIHEPRLLLLDEPLGALDALTRIEMQQLIEGL-WREHGF---TVLLVTHDVSEAV 206          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_LACAC (Phosphonates import ATP-binding protein phnC OS=Lactobacillus acidophilus GN=phnC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 56/190 (29.47%), Postives = 100/190 (52.63%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDD--------------ALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764
            GE + ++G SG GKSTLL ++  RL  +   +G+ILI+G+    A G +    + D              +++  + V    YY       +  TK + K++A   ++++ L D +  R     A  LSGGQ++RV+I   ++  PK++  DEPT+ LD   S  VM+ +  L+++ +G+   T++A++H
Sbjct:   33 GEFVVVVGLSGAGKSTLLRSI-NRL--HDISSGDILIDGKSITNAKGKNLRELRRDIGMIFQNFNLVKRSSVLRNVLVGRVAYYPTWKTTFNLFTK-EDKQKAYEALQKVDLADKVYAR-----ADELSGGQQQRVAIARVLMQNPKIILADEPTASLDPQTSVRVMNDLKMLNEK-YGM---TVVANLH 209          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: NODI_BURXL (Nod factor export ATP-binding protein I OS=Burkholderia xenovorans (strain LB400) GN=nodI PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 56/195 (28.72%), Postives = 92/195 (47.18%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING----RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764
            G ++++ GL+ +  PGE   ++GP+G GK+T L  L   LG     AG I + G    R+  +A      V Q D L    TV E +    +      M+  Q +      ++   L+   + R+       LSGG KRR+++   ++  P +L +DEPT+GLD  A + +  R+  L  R      +TI+ + H
Sbjct:   16 GEKTVVDGLSFHVAPGECFGLLGPNGAGKTTTLRML---LGIAAPDAGTIRLCGEPIPRRARVARARVGVVPQFDNLDPDFTVRENLLVFGRYF---GMSAAQCRAMVPPLLEFARLESKADARVSE-----LSGGMKRRLTLARALVNDPDVLIMDEPTTGLDPQARHLIWERLRSLLAR-----GKTILLTTH 194          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MDR49_DROME (Multidrug resistance protein homolog 49 OS=Drosophila melanogaster GN=Mdr49 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 57/177 (32.20%), Postives = 87/177 (49.15%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK-RALAYG----TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            IL+GLT    PG+ +A +G SGCGKSTL+  +         +AG + ++GR  R L  G        V Q+  L  T T+ E + Y         + K  +       I    L    +T++G  GA+ +SGGQK+R++I   ++ +P++L LDE TS LD  +   V S +    Q
Sbjct:  419 ILKGLTVDVLPGQTVAFVGASGCGKSTLIQLMQRFYDP---EAGSVKLDGRDLRTLNVGWLRSQIGVVGQEPVLFAT-TIGENIRYGRPSATQADIEKAARAANCHDFITR--LPKGYDTQVGEKGAQ-ISGGQKQRIAIARALVRQPQVLLLDEATSALDPTSEKRVQSALELASQ 588          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_WOLSU (Macrolide export ATP-binding/permease protein macB OS=Wolinella succinogenes GN=macB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 58/191 (30.37%), Postives = 95/191 (49.74%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---------AYVTQDDALITTLTVSE-----AVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734
            +L+G+     PGE +AIMG SG GKSTL++ L G L   ++  GE L  G   +L +             ++ Q   LI  L   E     A+Y  A +        +++++RAE  +  +GL + ++ R        LSGGQ++RVSI   ++   +++  DEPT  LDS +   VM  + +L ++ H +
Sbjct:   24 VLKGIDLQIYPGEFVAIMGASGSGKSTLMNIL-GCLDRPSQ--GEYLFRGESVSLLHRDDLAQLRREEFGFIFQSYHLIHALDARENVEVPAIYAGAGI--------VEREKRAEELLGSLGLGERLHHR-----PSQLSGGQQQRVSIARALMNGGRVILADEPTGALDSRSGEEVMQLLMELSRQGHTI 198          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CMPC_SYNY3 (Bicarbonate transport ATP-binding protein cmpC OS=Synechocystis sp. (strain PCC 6803) GN=cmpC PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            G    L+G+    + GE ++++G SGCGKSTLL+ +AG    +    G + + G++          + Q+ +L+  LTV + +  +   ++    +  ++K   E  I  +GL  A++ R G      LSGG K+RV+I   +  RPKLL LDEP   LD+
Sbjct:   20 GEYIALKGINLEIKKGEFVSLIGHSGCGKSTLLNMIAGL---DLPSEGIVTLEGQRIKQPGPDKMVIFQNYSLLPWLTVKQNIALAVD-EVMKGASAAERKAIVEEHINLVGLGHAVDKRPGE-----LSGGMKQRVAIARALAIRPKLLLLDEPFGALDA 171          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YURJ_BACSU (Uncharacterized ABC transporter ATP-binding protein yurJ OS=Bacillus subtilis GN=yurJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 3
Query:  240 ELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK---RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            ELL ++GPSGCGKST L  +AG     +   G +LI+G +           A V Q+ AL   +TV + + +  +L+    M K +  ER     + + ++  +  +      K LSGGQ++RV++   ++  PK+  +DEP S LD+     + + I+KL QR
Sbjct:   30 ELLVLVGPSGCGKSTTLRMVAGL---ESISEGNLLIDGERVNDLPPKERDIAMVFQNYALYPHMTVFDNMAFGLKLR---KMAKQEIAERVHAAARILEIEHLLKRK-----PKALSGGQRQRVALGRSIVREPKVFLMDEPLSNLDAKLRVTMRTEISKLHQR 182          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y986_MYCTU (Uncharacterized ABC transporter ATP-binding protein Rv0986/MT1014 OS=Mycobacterium tuberculosis GN=Rv0986 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 63/204 (30.88%), Postives = 98/204 (48.04%), Query Frame = 3
Query:  198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRAL-AYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMT---IKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773
            R +L  +T    PGE +A++G SG GKSTLL+ ++G     T   G++ ING        R R L        V Q   LI TLTV E       + LP  +  + +++ A +    ++++G+ D   T         LSGG+++RV+I   +   P L+  DEPT  LDS     V+  +  L ++      +T+I + H PS
Sbjct:   23 RQVLDHITFDFEPGEFVALLGQSGSGKSTLLNLISGIEKPTT---GDVTINGFAITQKTERDRTLFRRDQIGIVFQFFNLIPTLTVLE------NITLPQELAGVSQRKAAVVARDLLEKVGMADRERT-----FPDKLSGGEQQRVAISRALAHNPMLVLADEPTGNLDSDTGDKVLDVLLDLTRQ----AGKTLIMATHSPS 208          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_PSEPF (Aliphatic sulfonates import ATP-binding protein ssuB OS=Pseudomonas fluorescens (strain Pf0-1) GN=ssuB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 59/197 (29.95%), Postives = 94/197 (47.72%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782
            G+R +L+G+  +   G+ +A++G SGCGKSTLL  LA   G +    G++L        A   +  + Q+  L+    + + V             K   + +A   +  +GL D  N     W A  LSGGQK+RV++   ++ +P+LL LDEP   LD+     +   I +L Q+ HG    T++   H  S  V
Sbjct:   25 GSRQVLRGIDLHIPAGQFVAVVGRSGCGKSTLLRLLA---GLDQPTGGDLLAGSAPLTDARDDTRLMFQEARLLPWKKIIDNVGLG---------LKGNWRAQALQALDAVGLADRANE----WPA-ALSGGQKQRVALARALIHQPRLLLLDEPLGALDALTRIEMQQLIERLWQQ-HGF---TVLLVTHDVSEAV 200          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SSUB2_AGRT52.459e-1232.39Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB1_PSEAE2.459e-1231.98Aliphatic sulfonates import ATP-binding protein ss... [more]
PHNC_LACAC2.459e-1229.47Phosphonates import ATP-binding protein phnC OS=La... [more]
NODI_BURXL2.459e-1228.72Nod factor export ATP-binding protein I OS=Burkhol... [more]
MDR49_DROME2.459e-1232.20Multidrug resistance protein homolog 49 OS=Drosoph... [more]
MACB_WOLSU2.459e-1230.37Macrolide export ATP-binding/permease protein macB... [more]
CMPC_SYNY32.459e-1231.68Bicarbonate transport ATP-binding protein cmpC OS=... [more]
YURJ_BACSU3.211e-1231.71Uncharacterized ABC transporter ATP-binding protei... [more]
Y986_MYCTU3.211e-1230.88Uncharacterized ABC transporter ATP-binding protei... [more]
SSUB_PSEPF3.211e-1229.95Aliphatic sulfonates import ATP-binding protein ss... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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