CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB2_AGRT5 (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ssuB2 PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12 Identity = 57/176 (32.39%), Postives = 89/176 (50.57%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHG 731 +L+GL+ G+ L+I+G SGCGKSTLL +A T G I I+G + G + QD L+ TV + + + LP+ + RA + E+GL + + W ++ LSGGQ++RV++ ++ RP+LL LDEP LD+ + I + R HG Sbjct: 31 VLKGLSLNVPAGQFLSIVGRSGCGKSTLLRLIADL---ETIDGGTIQIDGNPLSEISGEVRMMFQDARLLPWRTVLQNI----GIGLPNPW-----QNRARKALAEVGLSEHADK----WPSQ-LSGGQRQRVALARALIHRPRLLLLDEPLGALDALTRLEMQDLIESIRAR-HG 188
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB1_PSEAE (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Pseudomonas aeruginosa GN=ssuB1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12 Identity = 63/197 (31.98%), Postives = 93/197 (47.21%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782 G R +L+ + G+ +AI+G SGCGKSTLL LAG L +R GE+L A A + + QD L+ V + V + + +A ++ +GL + N W A LSGGQK+RV++ ++ P+LL LDEP LD+ + I L R+HG T++ H S V Sbjct: 31 GEREVLKDIDLLVPAGQFVAIVGRSGCGKSTLLRLLAG-LDQPSR--GELLAGSAALAEAREDTRLMFQDSRLLPWKRVIDNVGLG---------LRGDWRAKALQALRAVGLAERANE----WPA-ALSGGQKQRVALARALIHEPRLLLLDEPLGALDALTRIEMQQLIEGL-WREHGF---TVLLVTHDVSEAV 206
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_LACAC (Phosphonates import ATP-binding protein phnC OS=Lactobacillus acidophilus GN=phnC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12 Identity = 56/190 (29.47%), Postives = 100/190 (52.63%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDD--------------ALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 GE + ++G SG GKSTLL ++ RL + +G+ILI+G+ A G + + D +++ + V YY + TK + K++A ++++ L D + R A LSGGQ++RV+I ++ PK++ DEPT+ LD S VM+ + L+++ +G+ T++A++H Sbjct: 33 GEFVVVVGLSGAGKSTLLRSI-NRL--HDISSGDILIDGKSITNAKGKNLRELRRDIGMIFQNFNLVKRSSVLRNVLVGRVAYYPTWKTTFNLFTK-EDKQKAYEALQKVDLADKVYAR-----ADELSGGQQQRVAIARVLMQNPKIILADEPTASLDPQTSVRVMNDLKMLNEK-YGM---TVVANLH 209
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: NODI_BURXL (Nod factor export ATP-binding protein I OS=Burkholderia xenovorans (strain LB400) GN=nodI PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12 Identity = 56/195 (28.72%), Postives = 92/195 (47.18%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING----RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 G ++++ GL+ + PGE ++GP+G GK+T L L LG AG I + G R+ +A V Q D L TV E + + M+ Q + ++ L+ + R+ LSGG KRR+++ ++ P +L +DEPT+GLD A + + R+ L R +TI+ + H Sbjct: 16 GEKTVVDGLSFHVAPGECFGLLGPNGAGKTTTLRML---LGIAAPDAGTIRLCGEPIPRRARVARARVGVVPQFDNLDPDFTVRENLLVFGRYF---GMSAAQCRAMVPPLLEFARLESKADARVSE-----LSGGMKRRLTLARALVNDPDVLIMDEPTTGLDPQARHLIWERLRSLLAR-----GKTILLTTH 194
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MDR49_DROME (Multidrug resistance protein homolog 49 OS=Drosophila melanogaster GN=Mdr49 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12 Identity = 57/177 (32.20%), Postives = 87/177 (49.15%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK-RALAYG----TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 IL+GLT PG+ +A +G SGCGKSTL+ + +AG + ++GR R L G V Q+ L T T+ E + Y + K + I L +T++G GA+ +SGGQK+R++I ++ +P++L LDE TS LD + V S + Q Sbjct: 419 ILKGLTVDVLPGQTVAFVGASGCGKSTLIQLMQRFYDP---EAGSVKLDGRDLRTLNVGWLRSQIGVVGQEPVLFAT-TIGENIRYGRPSATQADIEKAARAANCHDFITR--LPKGYDTQVGEKGAQ-ISGGQKQRIAIARALVRQPQVLLLDEATSALDPTSEKRVQSALELASQ 588
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_WOLSU (Macrolide export ATP-binding/permease protein macB OS=Wolinella succinogenes GN=macB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12 Identity = 58/191 (30.37%), Postives = 95/191 (49.74%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---------AYVTQDDALITTLTVSE-----AVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734 +L+G+ PGE +AIMG SG GKSTL++ L G L ++ GE L G +L + ++ Q LI L E A+Y A + +++++RAE + +GL + ++ R LSGGQ++RVSI ++ +++ DEPT LDS + VM + +L ++ H + Sbjct: 24 VLKGIDLQIYPGEFVAIMGASGSGKSTLMNIL-GCLDRPSQ--GEYLFRGESVSLLHRDDLAQLRREEFGFIFQSYHLIHALDARENVEVPAIYAGAGI--------VEREKRAEELLGSLGLGERLHHR-----PSQLSGGQQQRVSIARALMNGGRVILADEPTGALDSRSGEEVMQLLMELSRQGHTI 198
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CMPC_SYNY3 (Bicarbonate transport ATP-binding protein cmpC OS=Synechocystis sp. (strain PCC 6803) GN=cmpC PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12 Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674 G L+G+ + GE ++++G SGCGKSTLL+ +AG + G + + G++ + Q+ +L+ LTV + + + ++ + ++K E I +GL A++ R G LSGG K+RV+I + RPKLL LDEP LD+ Sbjct: 20 GEYIALKGINLEIKKGEFVSLIGHSGCGKSTLLNMIAGL---DLPSEGIVTLEGQRIKQPGPDKMVIFQNYSLLPWLTVKQNIALAVD-EVMKGASAAERKAIVEEHINLVGLGHAVDKRPGE-----LSGGMKQRVAIARALAIRPKLLLLDEPFGALDA 171
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YURJ_BACSU (Uncharacterized ABC transporter ATP-binding protein yurJ OS=Bacillus subtilis GN=yurJ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12 Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 240 ELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK---RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 ELL ++GPSGCGKST L +AG + G +LI+G + A V Q+ AL +TV + + + +L+ M K + ER + + ++ + + K LSGGQ++RV++ ++ PK+ +DEP S LD+ + + I+KL QR Sbjct: 30 ELLVLVGPSGCGKSTTLRMVAGL---ESISEGNLLIDGERVNDLPPKERDIAMVFQNYALYPHMTVFDNMAFGLKLR---KMAKQEIAERVHAAARILEIEHLLKRK-----PKALSGGQRQRVALGRSIVREPKVFLMDEPLSNLDAKLRVTMRTEISKLHQR 182
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y986_MYCTU (Uncharacterized ABC transporter ATP-binding protein Rv0986/MT1014 OS=Mycobacterium tuberculosis GN=Rv0986 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12 Identity = 63/204 (30.88%), Postives = 98/204 (48.04%), Query Frame = 3 Query: 198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRAL-AYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMT---IKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPS 773 R +L +T PGE +A++G SG GKSTLL+ ++G T G++ ING R R L V Q LI TLTV E + LP + + +++ A + ++++G+ D T LSGG+++RV+I + P L+ DEPT LDS V+ + L ++ +T+I + H PS Sbjct: 23 RQVLDHITFDFEPGEFVALLGQSGSGKSTLLNLISGIEKPTT---GDVTINGFAITQKTERDRTLFRRDQIGIVFQFFNLIPTLTVLE------NITLPQELAGVSQRKAAVVARDLLEKVGMADRERT-----FPDKLSGGEQQRVAISRALAHNPMLVLADEPTGNLDSDTGDKVLDVLLDLTRQ----AGKTLIMATHSPS 208
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_PSEPF (Aliphatic sulfonates import ATP-binding protein ssuB OS=Pseudomonas fluorescens (strain Pf0-1) GN=ssuB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12 Identity = 59/197 (29.95%), Postives = 94/197 (47.72%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782 G+R +L+G+ + G+ +A++G SGCGKSTLL LA G + G++L A + + Q+ L+ + + V K + +A + +GL D N W A LSGGQK+RV++ ++ +P+LL LDEP LD+ + I +L Q+ HG T++ H S V Sbjct: 25 GSRQVLRGIDLHIPAGQFVAVVGRSGCGKSTLLRLLA---GLDQPTGGDLLAGSAPLTDARDDTRLMFQEARLLPWKKIIDNVGLG---------LKGNWRAQALQALDAVGLADRANE----WPA-ALSGGQKQRVALARALIHQPRLLLLDEPLGALDALTRIEMQQLIERLWQQ-HGF---TVLLVTHDVSEAV 200 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |