CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_BACLD (Aliphatic sulfonates import ATP-binding protein ssuB OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ssuB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 53/165 (32.12%), Postives = 80/165 (48.48%), Query Frame = 3
Query:  180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            G+     S+LQ +      GE L ++GPSGCGKSTLL   AG  G      G I +NGR+         ++ Q+  L   +TV + +  +A L L +   + +  E  E T++  G +            + LSGG  +RV+I   +L  P++L LDEP   LD+
Sbjct:   13 GKGSFKTSVLQDVNLTVENGEFLTVIGPSGCGKSTLLKIAAGLDGD---YEGRISMNGREIKGPGIQQGFIFQEHRLFPWMTVEQNI--AADLSLKEPAVRKKVDELIE-TVRLKGAEKQY--------PRELSGGMSQRVAIARALLREPEILLLDEPFGALDA 163          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACFR (Spermidine/putrescine import ATP-binding protein potA OS=Bacteroides fragilis GN=potA PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVT---QDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671
            G ++ L  +T   + GE + I+GPSGCGK+TLL  +A   G  T   GEI I+G++          V    Q  AL   L V + + +  +L+    M K   +++ +  +K +G+ D     +       LSGGQ++RV+I   ++  P++L LDEP + LD
Sbjct:   20 GEKTALDHVTLNVKKGEFVTILGPSGCGKTTLLRLIA---GFQTASEGEIKISGKEITQTPPHKRPVNTVFQKYALFPHLNVYDNIAFGLKLK---KMPKQTIEKKVKAALKMVGMTDYEYRDV-----DSLSGGQQQRVAIARAIVNEPEVLLLDEPLAALD 171          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACFN (Spermidine/putrescine import ATP-binding protein potA OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=potA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVT---QDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671
            G ++ L  +T   + GE + I+GPSGCGK+TLL  +A   G  T   GEI I+G++          V    Q  AL   L V + + +  +L+    M K   +++ +  +K +G+ D     +       LSGGQ++RV+I   ++  P++L LDEP + LD
Sbjct:   20 GEKTALDHVTLNVKKGEFVTILGPSGCGKTTLLRLIA---GFQTASEGEIKISGKEITQTPPHKRPVNTVFQKYALFPHLNVYDNIAFGLKLK---KMPKQTIEKKVKAALKMVGMTDYEYRDV-----DSLSGGQQQRVAIARAIVNEPEVLLLDEPLAALD 171          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_ANAVT (Phosphonates import ATP-binding protein phnC OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=phnC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 62/199 (31.16%), Postives = 98/199 (49.25%), Query Frame = 3
Query:  195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING---RKRALAY--GTSAYVTQDDALITTLTVSEAVYYS--AQLQLPDTMTKLQKKER--AEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764
            NR IL  ++ + + GE + ++G +G GKSTLL +L G +       GE+ ING     R L         + Q   LI  L+  E V            T+    K++R  A   ++++GL++    R        LSGGQ++RV+I   ++  P++L  DEPT+GLD  A+  VM  +A+L    H     T++A +H
Sbjct:   20 NRPILNEISCHIKQGEFVVLLGLNGAGKSTLLRSLVGLV---PLVKGEVHINGVAMNSRILPQIRRDVGMLFQGGGLIPQLSAIENVLCGRLGTRTTWQTLFGFPKRDRLLALELLEQLGLRELAYQR-----TSKLSGGQQQRVAIARALIQSPQILLADEPTTGLDVIATQQVMETLAEL----HTQQGMTVVAVLH 206          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC2_ANASP (Phosphonates import ATP-binding protein phnC 2 OS=Anabaena sp. (strain PCC 7120) GN=phnC2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 62/199 (31.16%), Postives = 98/199 (49.25%), Query Frame = 3
Query:  195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING---RKRALAY--GTSAYVTQDDALITTLTVSEAVYYS--AQLQLPDTMTKLQKKER--AEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764
            NR IL  ++ + + GE + ++G +G GKSTLL +L G +       GE+ ING     R L         + Q   LI  L+  E V            T+    K++R  A   ++++GL++    +        LSGGQ++RV+I   ++  P++L  DEPT+GLD  A+  VM  +A+L    H     T+IA +H
Sbjct:   20 NRPILNEISCHIKQGEFVVLLGLNGAGKSTLLRSLVGLV---PLVRGEVHINGVAMNSRILPQIRRDVGMLFQGGGLIPQLSAIENVLCGRLGTRTTWQTLFGFPKRDRLLALELLEQLGLRELAYQK-----TSKLSGGQQQRVAIARALIQSPQILLADEPTTGLDVIATQQVMETLAEL----HAQQGMTVIAVLH 206          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MSBA_RALME (Lipid A export ATP-binding/permease protein msbA OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=msbA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 62/178 (34.83%), Postives = 96/178 (53.93%), Query Frame = 3
Query:  198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALA--YGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKK-ERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713
            R+ L  ++  A PGE++A++GPSG GK+TL++ L  R    T   G IL++G+   + ALA      A+V+QD  L    TV+  V Y    +    M ++++    A +T    GL + + T IG  G K LSGGQ++R++I   +     +L LDE TS LDS +   V + +  L
Sbjct:  364 RAALNHVSLRAAPGEVVALVGPSGSGKTTLVN-LVPRFFDPTE--GHILLDGQPIDRFALADLRRQIAFVSQDVVLFND-TVAANVAYGVHPREKIDMARVERALAAAYLTDVVKGLPEGLETNIGDNGMK-LSGGQRQRLAIARAIYKDAPILILDEATSALDSESERQVQAALESL 536          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MALK_YERPS (Maltose/maltodextrin import ATP-binding protein malK OS=Yersinia pseudotuberculosis GN=malK PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            GE +  +GPSGCGKSTLL  +AG        +GE+LI G++      +      V Q  AL   L+V+E + +  +L     + K +  +R     + + L   ++ R      K LSGGQ++RV+I   +++ P +  LDEP S LD+A    +   I++L +R
Sbjct:   29 GEFVVFVGPSGCGKSTLLRMIAGL---EDITSGELLIGGKRMNEVPPSERGIGMVFQSYALYPHLSVAENMSFGLKLA---GVKKAEIYQRVNQVAEVLQLAHLLDRR-----PKALSGGQRQRVAIGRTLVSEPDVFLLDEPLSNLDAALRVQMRIEISRLHKR 182          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MALK_YERPN (Maltose/maltodextrin import ATP-binding protein malK OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=malK PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            GE +  +GPSGCGKSTLL  +AG        +GE+LI G++      +      V Q  AL   L+V+E + +  +L     + K +  +R     + + L   ++ R      K LSGGQ++RV+I   +++ P +  LDEP S LD+A    +   I++L +R
Sbjct:   29 GEFVVFVGPSGCGKSTLLRMIAGL---EDITSGELLIGGKRMNEVPPSERGIGMVFQSYALYPHLSVAENMSFGLKLA---GVKKAEIYQRVNQVAEVLQLAHLLDRR-----PKALSGGQRQRVAIGRTLVSEPDVFLLDEPLSNLDAALRVQMRIEISRLHKR 182          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MALK_YERPE (Maltose/maltodextrin import ATP-binding protein malK OS=Yersinia pestis GN=malK PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            GE +  +GPSGCGKSTLL  +AG        +GE+LI G++      +      V Q  AL   L+V+E + +  +L     + K +  +R     + + L   ++ R      K LSGGQ++RV+I   +++ P +  LDEP S LD+A    +   I++L +R
Sbjct:   29 GEFVVFVGPSGCGKSTLLRMIAGL---EDITSGELLIGGKRMNEVPPSERGIGMVFQSYALYPHLSVAENMSFGLKLA---GVKKAEIYQRVNQVAEVLQLAHLLDRR-----PKALSGGQRQRVAIGRTLVSEPDVFLLDEPLSNLDAALRVQMRIEISRLHKR 182          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MALK_YERPA (Maltose/maltodextrin import ATP-binding protein malK OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=malK PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            GE +  +GPSGCGKSTLL  +AG        +GE+LI G++      +      V Q  AL   L+V+E + +  +L     + K +  +R     + + L   ++ R      K LSGGQ++RV+I   +++ P +  LDEP S LD+A    +   I++L +R
Sbjct:   29 GEFVVFVGPSGCGKSTLLRMIAGL---EDITSGELLIGGKRMNEVPPSERGIGMVFQSYALYPHLSVAENMSFGLKLA---GVKKAEIYQRVNQVAEVLQLAHLLDRR-----PKALSGGQRQRVAIGRTLVSEPDVFLLDEPLSNLDAALRVQMRIEISRLHKR 182          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SSUB_BACLD3.211e-1232.12Aliphatic sulfonates import ATP-binding protein ss... [more]
POTA_BACFR3.211e-1231.90Spermidine/putrescine import ATP-binding protein p... [more]
POTA_BACFN3.211e-1231.90Spermidine/putrescine import ATP-binding protein p... [more]
PHNC_ANAVT3.211e-1231.16Phosphonates import ATP-binding protein phnC OS=An... [more]
PHNC2_ANASP3.211e-1231.16Phosphonates import ATP-binding protein phnC 2 OS=... [more]
MSBA_RALME3.211e-1234.83Lipid A export ATP-binding/permease protein msbA O... [more]
MALK_YERPS3.211e-1232.12Maltose/maltodextrin import ATP-binding protein ma... [more]
MALK_YERPN3.211e-1232.12Maltose/maltodextrin import ATP-binding protein ma... [more]
MALK_YERPE3.211e-1232.12Maltose/maltodextrin import ATP-binding protein ma... [more]
MALK_YERPA3.211e-1232.12Maltose/maltodextrin import ATP-binding protein ma... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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