CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_PELLD (Macrolide export ATP-binding/permease protein macB OS=Pelodictyon luteolum (strain DSM 273) GN=macB PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 68/215 (31.63%), Postives = 106/215 (49.30%), Query Frame = 3
Query:  156 DLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEM--TIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            D+  T P G+   N   L+G++   R GE +AIMG SG GKS+LL  L G L +  R  GE  I GR         +  L    + +V Q   L+  +++ + V      +LP   + L+   R E   ++K++GL   ++   G      LSGG+++RV+I   ++  P +LF DEPT  LDS  S  +M  + +L +       RTI+   H+
Sbjct:   12 DVHRTYPVGESTVNA--LRGVSLEIREGEFVAIMGSSGSGKSSLLHIL-GLLDNPDR--GEYRILGRNVNALPEDGQAGLRNHVAGFVFQQFHLLKRMSIVDNV------RLPHIYSGLKGDFRHEALESLKKVGLMHRLDHTPGQ-----LSGGEQQRVAIARALIGNPMILFADEPTGNLDSRNSLEIMKILEELHRE-----GRTIVMVTHE 205          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD_AGRT5 (Lipoprotein-releasing system ATP-binding protein lolD OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=lolD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 63/190 (33.16%), Postives = 91/190 (47.89%), Query Frame = 3
Query:  180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKG---LSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713
            GQ + + SIL+      + GE++A++ PSG GKSTLL  LAG L      AGE+LING          + A+      +V Q   L+   T  E V      QL   +T+ + ++RA   +  M        R+G  G      LSGG+++RV+I   +   P LL  DEPT  LD   ++YV   +  L
Sbjct:   17 GQGETSLSILRKADFELKSGEMVALVAPSGTGKSTLLH-LAGLL--EHPDAGEVLINGAPCNGLPDEARTAIRRSDIGFVYQFHHLLPEFTAVENVMMP---QLIAGLTQAEARKRASALLDYM--------RVGHRGEHRPAELSGGEQQRVAIARAVANAPLLLLADEPTGNLDPETAHYVFDALEAL 192          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD2_CAUCR (Lipoprotein-releasing system ATP-binding protein lolD 2 OS=Caulobacter crescentus GN=lolD2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 58/193 (30.05%), Postives = 95/193 (49.22%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDAL-------AGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKE---RAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGS 740
            G+  +L+G+     PGE++ ++GPSG GKS+LL +        AG +    R   ++    R R +  GT  +V Q   L+   +  E V       +P T+    ++E   RA   ++ +GL   +N +        +SGG+++RV+I   +  RPKLL  DEPT  LD A S  V   + ++  R+ GV +
Sbjct:   20 GDLPVLRGVDLDVYPGEVVGLIGPSGSGKSSLLHSAGLLERPDAGLVALEGRDCSKLSERARTR-IRLGTVGFVYQFHHLLPEFSALENV------AMPLTIAGKSRREAEARARELLESLGLGHRLNHQ-----PAQMSGGEQQRVAIARALANRPKLLLADEPTGNLDPATSTAVFQALYQV-CREQGVAA 199          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_PHOLL (Fe(3+) ions import ATP-binding protein fbpC OS=Photorhabdus luminescens subsp. laumondii GN=fbpC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 49/181 (27.07%), Postives = 94/181 (51.93%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK---RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMG-LQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            GN +++  L      G ++ ++GPSGCGK+T+L  +AG        AG+I I+G     R++       V Q  AL   +++ E + Y  ++ L     +++++ +  + + ++G  +D    +I        SGGQ++RV++   ++ +PK+L  DEP S LD+     +  +I +L Q+
Sbjct:   17 GNNTVIDNLELSIPQGHMVTLLGPSGCGKTTVLRLVAGL---EKPSAGKIFIDGEDVTDRSIQQRDICMVFQSYALFPHMSLGENIGYGLKM-LGQPKAEIRERVKEALELVDLGGFEDRYVDQI--------SGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQ 185          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA_BURCE (Sulfate/thiosulfate import ATP-binding protein cysA (Fragment) OS=Burkholderia cepacia GN=cysA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 56/178 (31.46%), Postives = 94/178 (52.81%), Query Frame = 3
Query:  165 VTVPDGQKK-GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAK----GLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            +TV + QK+ G+ + L  ++    PGEL+A++GPSGCGK+TLL  +A   G     AG++++ G   A          +V Q  AL   +TV E V +  ++       K +++  +E  I+E  + + +      W A+     LSGGQ++R+++   +   PK+L LDEP   LD+
Sbjct:    3 ITVRNLQKRFGDFTALDNVSLDFPPGELVALLGPSGCGKTTLLRVIA---GLEHADAGQVVLQGLDVASVGARDRQVGFVFQHYALFRHMTVFENVAFGLRV-------KPRRERPSEAAIREK-VHELLKLVQLDWLAQRYPSELSGGQRQRIALARALAVEPKVLLLDEPFGALDA 169          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CVAB_ECOLX (Colicin V secretion/processing ATP-binding protein cvaB OS=Escherichia coli GN=cvaB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12
Identity = 58/176 (32.95%), Postives = 89/176 (50.57%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING---RKRALA--YGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLD 716
            I   L+    PGE +AI G SG GK+TL+  L G    ++   G +LING   R+  +   +   A V QDD L +  ++ E +   A+    + M +  +       I  M +     T IG  G +GLSGGQK+R+ I   +  +P +LF+DE TS LDS + ++V   I  ++
Sbjct:  508 IFSALSLSVAPGESVAITGASGAGKTTLMKVLCGLFEPDS---GRVLINGIDIRQIGINNYHRMIACVMQDDRLFSG-SIRENICGFAEEMDEEWMVECARASHIHDVIMNMPM--GYETLIGELG-EGLSGGQKQRIFIARALYRKPGILFMDEATSALDSESEHFVNVAIKNMN 676          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y796_METJA (Uncharacterized ABC transporter ATP-binding protein MJ0796 OS=Methanocaldococcus jannaschii GN=MJ0796 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 56/187 (29.95%), Postives = 88/187 (47.06%), Query Frame = 3
Query:  231 RPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKR---------ALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764
            + GE ++IMGPSG GKST+L+ + G L   T   GE+ I+  K           +      +V Q   LI  LT  E V      +    M+  ++++RA   +K   L++    R        LSGGQ++RV+I   +   P ++  DEPT  LDS     +M  + KL++ D     +T++   H
Sbjct:   29 KEGEFVSIMGPSGSGKSTMLNII-GCLDKPTE--GEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEE----RFANHKPNQLSGGQQQRVAIARALANNPPIILADEPTGALDSKTGEKIMQLLKKLNEED----GKTVVVVTH 204          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y1996_METMA (Putative ABC transporter ATP-binding protein MM_1996 OS=Methanosarcina mazei GN=MM_1996 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 55/218 (25.23%), Postives = 104/218 (47.71%), Query Frame = 3
Query:  114 VNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRL---------GSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQ----DAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH 728
            +N++ G  + +  +DLW T P   +    + L+G+    + GE + + GP+GCGKSTLL  L G +         GS      E + +G+          + + DD + +T    E  +    L     M + +  ++ +  +K +G+     D+ N+         LSGGQK+RV I   +   P++L +DEP S +D A +  +++ + +L+++ +
Sbjct:    1 MNQNRGSTI-IEIRDLWYTYPGRAE----TTLKGIDLKIKEGEFVLLTGPTGCGKSTLLKTLNGIIPHESEGIFSGSIKISGIETVDSGQMELSKKAGLVFQSPDDQIFSTTVEDEVAFGPENL----CMEREEIDKKVDDALKMVGMSGHRLDSTNS---------LSGGQKQRVCIASMLAMMPEILAMDEPVSQMDPAGTQEILNTVRELNRKQN 200          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_ANAVT (Aliphatic sulfonates import ATP-binding protein ssuB OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ssuB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 52/161 (32.30%), Postives = 83/161 (51.55%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            G++++L  L     PGE +AI+G SGCGKSTLL  ++G     T   G IL++G        +   + Q+  L+    V + V    Q            + +A   ++++GL+D    R G W    LSGGQ++RV++   ++++P LL LDEP   LD+
Sbjct:   20 GHKTVLNSLNLEVAPGEFIAIVGRSGCGKSTLLRLVSGLDKPTT---GGILLDGEPLRKLSHSVRVMFQEPRLLPWKRVIDNVGLGLQENW---------QSKATWVLEQVGLKD----RAGEW-PHVLSGGQRQRVALARALVSQPHLLLLDEPLGALDA 163          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB2_PARDP (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Paracoccus denitrificans (strain Pd 1222) GN=ssuB2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 58/180 (32.22%), Postives = 89/180 (49.44%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHG 731
            G R ++  L    RPGE +A++G SGCGKSTLL  L      +    GE+++  R RA+A+               L   + V+++  L LP        ++RAE  + E+G+      R   W  K LSGG+ +R ++   ++  P LL LDEP + LD+       + +A+L QR HG
Sbjct:   25 GPRRVIDNLDLAIRPGEFVALLGASGCGKSTLLRILG---DLDPEFEGEVVVPSR-RAIAFQA-----------PRLMPWKRVWHNVVLGLPGR----PDRKRAERALDEVGI----GHRADVW-PKVLSGGEAQRAALARALVREPDLLLLDEPFAALDALTRIKAQALVAELWQR-HG 179          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MACB_PELLD3.211e-1231.63Macrolide export ATP-binding/permease protein macB... [more]
LOLD_AGRT53.211e-1233.16Lipoprotein-releasing system ATP-binding protein l... [more]
LOLD2_CAUCR3.211e-1230.05Lipoprotein-releasing system ATP-binding protein l... [more]
FBPC_PHOLL3.211e-1227.07Fe(3+) ions import ATP-binding protein fbpC OS=Pho... [more]
CYSA_BURCE3.211e-1231.46Sulfate/thiosulfate import ATP-binding protein cys... [more]
CVAB_ECOLX3.211e-1232.95Colicin V secretion/processing ATP-binding protein... [more]
Y796_METJA4.194e-1229.95Uncharacterized ABC transporter ATP-binding protei... [more]
Y1996_METMA4.194e-1225.23Putative ABC transporter ATP-binding protein MM_19... [more]
SSUB_ANAVT4.194e-1232.30Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB2_PARDP4.194e-1232.22Aliphatic sulfonates import ATP-binding protein ss... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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