CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: RBSA2_ECO57 (Ribose import ATP-binding protein rbsA 2 OS=Escherichia coli O157:H7 GN=rbsA2 PE=3 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 58/202 (28.71%), Postives = 105/202 (51.98%), Query Frame = 3 Query: 207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR-------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 L+G+ PGE+ A+MG +G GKSTL+ LA G+ T +GEILI+G+ K AL+ G + + Q+ L L+V+E ++ ++L + + + +A+ I +G Q + ++ L+ ++++V I + ++L +DEPT+ L S ++ + I +L RD G+ I I +EV++L Sbjct: 22 LKGVDLTVYPGEIHALMGENGAGKSTLMKVLA---GAYTATSGEILIDGKPFHIRTPKDALSAGIT-LIYQEMQLAPNLSVAENIFLGSELSHGGLVQRKEMLVQAQKVIDRLGAQFNASDKV-----MTLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRETHRLFELIMRL--RDEGMA----IIYISHRMAEVYEL 208
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_NITEU (Spermidine/putrescine import ATP-binding protein potA OS=Nitrosomonas europaea GN=potA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 51/149 (34.23%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSA---YVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674 GEL ++GPSGCGK+TLL +AG + +G+IL++G+ A V Q AL +TV++ V + ++ T + K+R E ++E+ L +R LSGGQK+RV+ ++ RP+LL +DEP LD+ Sbjct: 29 GELFTLLGPSGCGKTTLLRMIAG---FDVPDSGQILLDGQDIANTPPEKRPIHTVFQSYALFPHMTVADNVAFPLKMS---GKTPAEIKKRVEKALEEVQL-----SRFTHRFPHELSGGQKQRVAFARGLINRPRLLLMDEPLGALDA 166
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_METCA (Spermidine/putrescine import ATP-binding protein potA OS=Methylococcus capsulatus GN=potA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 57/163 (34.97%), Postives = 82/163 (50.31%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVT---QDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671 G+ L+ R GELL ++GPSGCGK+T+L LA G +GEI ++GR A + V Q AL L+V+E V + + M KL E T + L+ +GG LSGGQ++RV++ ++ RP++L LDE S LD Sbjct: 37 GSHCALRDFNLELREGELLTLLGPSGCGKTTVLRLLA---GLEIPDSGEIFLDGRTLAGVPPEARNVNTVFQSYALFPHLSVAENVAFGLR------MKKLGSAEIRARTAE--ALRMVRLDGLGGHRPLQLSGGQQQRVALARALVNRPRVLLLDECLSALD 188
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_LEGPL (Spermidine/putrescine import ATP-binding protein potA OS=Legionella pneumophila (strain Lens) GN=potA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 58/184 (31.52%), Postives = 90/184 (48.91%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 GN IL ++ GE L ++GPSGCGK+TLL ++G GEI ING+ KR + V Q AL L+V E V ++ + + + ++R +K + L+ + K LSGGQ++RV+I ++ RP++L LDEP S LD + S + +L + Sbjct: 16 GNTPILNNVSLNVNHGEFLTLLGPSGCGKTTLLRLISG---FEQPTLGEIFINGQCVNQLPPQKRDVHT-----VFQSYALFPHLSVFENVAFALRCKKTPNQ---EIRKRVFDALKLVQLESLAERNV-----KQLSGGQQQRVAIARAIINRPQVLLLDEPLSSLDYRLRKAMQSELKQLQK 183
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_LEGPH (Spermidine/putrescine import ATP-binding protein potA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=potA PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 58/184 (31.52%), Postives = 90/184 (48.91%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 GN IL ++ GE L ++GPSGCGK+TLL ++G GEI ING+ KR + V Q AL L+V E V ++ + + + ++R +K + L+ + K LSGGQ++RV+I ++ RP++L LDEP S LD + S + +L + Sbjct: 16 GNTPILNNVSLNVNHGEFLTLLGPSGCGKTTLLRLISG---FEQPTQGEIFINGQCVNQLPPQKRDVHT-----VFQSYALFPHLSVFENVAFALRCKKTPNQ---EIRKRVFDALKLVQLESLAERNV-----KQLSGGQQQRVAIARAIINRPQVLLLDEPLSSLDYRLRKAMQSELKQLQK 183
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACTN (Spermidine/putrescine import ATP-binding protein potA OS=Bacteroides thetaiotaomicron GN=potA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 54/163 (33.13%), Postives = 85/163 (52.15%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVT---QDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671 G+++ L +T + GE + I+GPSGCGK+TLL +A G T GEI I+G++ V Q AL L V + + + +L+ T + KK +A +K +G+ D + LSGGQ++RV+I ++ P++L LDEP + LD Sbjct: 20 GDKTALDDVTLNVKKGEFVTILGPSGCGKTTLLRLIA---GFQTASEGEIRISGKEITQTPPHKRPVNTVFQKYALFPHLNVYDNIAFGLKLKKTPKQT-IGKKVKA--ALKMVGMTDYEYRDV-----DSLSGGQQQRVAIARAIVNEPEVLLLDEPLAALD 171
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: NODI_RHIGA (Nod factor export ATP-binding protein I OS=Rhizobium galegae GN=nodI PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 58/204 (28.43%), Postives = 96/204 (47.06%), Query Frame = 3 Query: 195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR----KRALAYGTSAYVTQDDALITTLTVSEAV-----YYSAQLQ-----LPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 +++++ L+ R GE ++GP+G GKST+ L LG T AG+I + G K LA + V+Q D L TV E + Y+ + +P + Q + +A++ + + LSGG KRR+++ ++ P+LL LDEPT+GLD A + + R+ L R +TI+ + H Sbjct: 60 DKTVVDSLSFGVRAGECFGLLGPNGAGKSTITRML---LGMATPSAGKISVLGLPVPGKARLARASIGVVSQFDNLDMEFTVRENLLVFGRYFQMSTRAIEKLIPSLLEFAQLEAKADVRVSD------------------LSGGMKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRSLLIR-----GKTILLTTH 237
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MSMX_BACSU (Maltodextrin import ATP-binding protein msmX OS=Bacillus subtilis GN=msmX PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 53/164 (32.32%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 240 ELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKR---ALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 E + +GPSGCGKST L +AG G+ I G++ A A V Q+ AL +TV + + + +L+ M K + K+R E K +GL++ ++ + K LSGGQ++RV++ ++ K+ +DEP S LD+ + + I KL QR Sbjct: 31 EFIVFVGPSGCGKSTTLRMVAGL---EEISKGDFYIEGKRVNDVAPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KMPKPEIKKRVEEAAKILGLEEYLHRK-----PKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRAEIIKLHQR 183
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: METN_CORGL (Methionine import ATP-binding protein metN OS=Corynebacterium glutamicum GN=metN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 3 Query: 186 KKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 K + L +T PGE++ I+G SG GKSTL+ + G L S T +G +L+NG K + Q L + T + V Y ++ M K +K R + ++ +GL D G + LSGGQK+RV I + T P LL DE TS LD ++ V+ + K++ R+ G+ TI+ H+ Sbjct: 38 KSAKTTALDNVTLTVEPGEVIGIIGYSGAGKSTLVRLING-LDSPT--SGSLLLNGTDIVGMPESKLRKLRSNIGMIFQQFNLFQSRTAAGNVEYPLEVA---KMDKAARKARVQEMLEFVGLGDK-----GKNYPEQLSGGQKQRVGIARALATNPTLLLADEATSALDPETTHEVLELLRKVN-RELGI---TIVVITHE 224
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MALK_MANSM (Maltose/maltodextrin import ATP-binding protein malK OS=Mannheimia succiniciproducens (strain MBEL55E) GN=malK PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 61/200 (30.50%), Postives = 99/200 (49.50%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQA--GEILING---RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 G+ G+ I + + GE + +GPSGCGKSTLL +AG T + GE L+N KR + V Q AL L V++ + + +L + K ++ +R + + L ++ + K LSGGQ++RV+I ++++P++ LDEP S LD+A + I+KL H +RT+I H Sbjct: 10 GKSYGDVHISKDINLEINEGEFVVFVGPSGCGKSTLLRMIAGLEDITTGELYIGEKLMNDVEPSKRGIGM-----VFQSYALYPHLDVADNMSFGLKLA---GVKKNERDQRVNQVAEILQLAHLLDRK-----PKALSGGQRQRVAIGRTLVSQPEVFLLDEPLSNLDAALRVQMRVEISKL----HKKLNRTMIYVTH 192 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |