CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_SHIFL (Macrolide export ATP-binding/permease protein macB OS=Shigella flexneri GN=macB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 66/218 (30.28%), Postives = 110/218 (50.46%), Query Frame = 3
Query:  144 LTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALA--GRLGSNT-RQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKER---AEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770
            L  +D+  + P G ++    +L+G++     GE++AI+G SG GKSTL++ L    +  S T R AG+ +      ALA        ++ Q   L+  LTV + V      ++P     L++K+R   A+  ++ +GL+D        +    LSGGQ++RVSI   ++   +++  DEPT  LDS +   VM+ + +L  R H     T+I   H P
Sbjct:    5 LELKDIRRSYPAGDEQVE--VLKGISLNIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDIATLDADALAQLRREHFGFIFQRYHLLPHLTVEQNV------EVPAVYAGLERKQRLLRAQELLQRLGLEDRTE-----YYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGH-----TVIIVTHDP 204          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_SHIDS (Macrolide export ATP-binding/permease protein macB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=macB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 66/218 (30.28%), Postives = 110/218 (50.46%), Query Frame = 3
Query:  144 LTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALA--GRLGSNT-RQAGEILINGRKRALAY---GTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKER---AEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770
            L  +D+  + P G ++    +L+G+T     GE++AI+G SG GKSTL++ L    +  S T R AG+ +      ALA        ++ Q   L++ LT  + V      ++P     L++K+R   A+  ++ +GL+D        +    LSGGQ++RVSI   ++   +++  DEPT  LDS +   VM+ + +L  R H     T+I   H P
Sbjct:    5 LELKDIRRSYPAGDEQVE--VLKGITLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLHREHFGFIFQRYHLLSHLTAEQNV------EVPAVYAGLERKQRLLRAQELLQRLGLEDRTE-----YYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGH-----TVIIVTHDP 204          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_ECO57 (Macrolide export ATP-binding/permease protein macB OS=Escherichia coli O157:H7 GN=macB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 66/218 (30.28%), Postives = 110/218 (50.46%), Query Frame = 3
Query:  144 LTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALA--GRLGSNT-RQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKER---AEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770
            L  +D+  + P G ++    +L+G+T     GE++AI+G SG GKSTL++ L    +  S T R AG+ +      ALA        ++ Q   L++ LT  + V      ++P     L++K+R   A+  ++ +GL+D        +    LSGGQ++RVSI   ++   +++  DEPT  LDS +   VM+ + +L  R H     T+I   H P
Sbjct:    5 LELKDIRRSYPAGDEQVE--VLKGITLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNV------EVPAVYAGLERKQRLLRAQELLQRLGLEDRTE-----YYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSCEQVMAILHQLRDRGH-----TVIIVTHDP 204          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LKTB_PASSP (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica-like sp. (strain 5943B) GN=lktB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 60/197 (30.46%), Postives = 97/197 (49.24%), Query Frame = 3
Query:  201 SILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-----SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            +IL  +    + GE++ I+G SG GKSTL   L         + G++LI+G   ALA           V QD+ L+   ++ E +  S      + +    K   A   I ++  ++  NT +G  GA GLSGGQ++R++I   ++  PK+L  DE TS LD  + + +M  + K+ Q       RT+I   H+ S+
Sbjct:  484 TILNNVNLEIKKGEVIGIVGRSGSGKSTLTKLLQRFY---IPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNR-SIRENIALSEPGMSMERVIYAAKLAGAHDFISDV--REGYNTIVGEQGA-GLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQ------GRTVILIAHRLST 667          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LKTB_AGGAC (Leukotoxin translocation ATP-binding protein lktB OS=Aggregatibacter actinomycetemcomitans GN=lktB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 69/249 (27.71%), Postives = 118/249 (47.39%), Query Frame = 3
Query:   45 AISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-----SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            +++R  +V+ S + N TA  S+++ E  G+  F         +    K  +  IL  +      GE++ I+G SG GKSTL   +         + G++LI+G   ALA           V QD+ L+   ++ E +  +      + +    K   A   I E  L++  NT +G  GA GLSGGQ++R++I   ++  P++L  DE TS LD  +   +M  + K+ Q      +RT++   H+ S+
Sbjct:  440 SVTRLGDVLNSPTENNTA--SVSLPEIQGEISFRN-------IKFRYKPDSPMILNNINLDISQGEVIGIVGRSGSGKSTLTKLIQRFY---IPEQGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNR-SIRENIALTNPGMPMEKVIAAAKLAGAHDFISE--LREGYNTVVGEQGA-GLSGGQRQRIAIARALVNNPRILIFDEATSALDYESENIIMHNMHKICQ------NRTVLIIAHRLST 666          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_PSEPF (Fe(3+) ions import ATP-binding protein fbpC OS=Pseudomonas fluorescens (strain Pf0-1) GN=fbpC PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 59/181 (32.60%), Postives = 89/181 (49.17%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING-----RKRAL-AYGTS-AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713
            G ++ L  +      G    I+GPSG GK+TLL  +AG        AG +++NG     R  A+ AY     YV QD AL   +TV++ + +          T   + ER +  +  + L   M TR   W  + LSGGQ++RVS+   +  RP+L+ LDEP S LD+     +   +A+L
Sbjct:   14 GAQTALDSINLSVPTGSRTVIVGPSGSGKTTLLRMIAG---FEFPDAGSLMLNGQTLVDRTHAVPAYQRQIGYVPQDGALFPHMTVADNIGFGL------AETGSARAERIQALMDNVALNADMATR---WPHE-LSGGQQQRVSLARALAQRPRLMLLDEPFSALDTGLRGAMRKMVARL 181          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_ECOLI (Fe(3+) ions import ATP-binding protein fbpC OS=Escherichia coli (strain K12) GN=fbpC PE=3 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK---RALAYGTSAYVTQDDALITTLTVSEAVYYSAQ-LQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            G+ +++  +      G+++ ++GPSGCGK+T+L  +AG         G+I I+G     R++       V Q  AL   +++ E V Y  + L +P    K + KE   M   E G +D    +I        SGGQ++RV++   ++ +PK+L  DEP S LD+     +  +I +L ++
Sbjct:   17 GSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGL---EKPSEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLE-GFEDRFVDQI--------SGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQ 185          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA2_CHRVO (Sulfate/thiosulfate import ATP-binding protein cysA 2 OS=Chromobacterium violaceum GN=cysA2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 56/167 (33.53%), Postives = 80/167 (47.90%), Query Frame = 3
Query:  231 RPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            R GE + ++GPSGCGK+TLL  +AG    +   AG I ++GR   + A A      V Q  AL   LTV++ + Y     L     K     R    +  +GL  +      G     LSGGQ++RV++   + T P LL LDEP S LD+     +   +  L +R
Sbjct:   37 RKGEFVCLLGPSGCGKTTLLRLIAGL---DLPDAGAIRLSGRDITRTAPAKRDYGIVFQSYALFPNLTVADNIAYG----LTPRRDKAGHAHRVRELLDMVGLPGSE-----GKYPSQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVRDKLREELKGLQRR 191          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ATM1_GIBZE (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Gibberella zeae GN=ATM1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 54/177 (30.51%), Postives = 87/177 (49.15%), Query Frame = 3
Query:  195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLL-------DALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRI 704
            NR IL+ L+     G+ +A++GPSGCGKSTLL       D   GR+  + +   ++ +   +R++       V QD  L    TV   + Y +     + +  + K+     TI+     D   T++G  G   +SGG+K+R+++   +L  P LLF DE TS LD+     +M  I
Sbjct:  451 NRPILRDLSLTIPAGKKVAVVGPSGCGKSTLLRLLFRSYDVQGGRVLIDDQDIRDVDLESLRRSI-----GVVPQDTPLFND-TVEHNIRYGSINATHEEVVAVAKRAHVHNTIQ--SFPDGYETKVGERGLM-ISGGEKQRLAVSRILLKDPPLLFFDEATSALDTHTEQALMMNI 618          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y691_RICTY (Putative export ATP-binding/permease protein RT0691 OS=Rickettsia typhi GN=RT0691 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 66/253 (26.09%), Postives = 121/253 (47.83%), Query Frame = 3
Query:   33 IPVPAISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS-----AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            +P  A+ R   +++  S      +++N    + D V + ++++  T      + N  I+  ++      + + I+G SG GKSTL+  L   L    +  G ILIN +  +    T      AYV Q+ ++ +    S  ++ + +    +    ++     E + K   L D +NT+IG  G + LSGGQK+R++I   +L +PK+L LDE  S LD+ +   +++ I K+      +    II+  H+ SS
Sbjct:  303 LPTTALERIITIIDKISIVHNNYYALN----NPDTVSIEFKNVDFTY---NSRPNLKIINNMSLKINANKFVGIVGRSGAGKSTLIQLL---LRFYRQDNGTILINNQDISRINPTDIRKFIAYVPQEASIFSDTIKSNIIFGNNKASDYEINEIIKITGIEEFSNK---LHDGINTKIGEKGVR-LSGGQKQRIAIARALLRKPKILLLDEAMSALDTMSEQKLLNAIKKI------MKGNIIISIAHRISS 535          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MACB_SHIFL4.194e-1230.28Macrolide export ATP-binding/permease protein macB... [more]
MACB_SHIDS4.194e-1230.28Macrolide export ATP-binding/permease protein macB... [more]
MACB_ECO574.194e-1230.28Macrolide export ATP-binding/permease protein macB... [more]
LKTB_PASSP4.194e-1230.46Leukotoxin translocation ATP-binding protein lktB ... [more]
LKTB_AGGAC4.194e-1227.71Leukotoxin translocation ATP-binding protein lktB ... [more]
FBPC_PSEPF4.194e-1232.60Fe(3+) ions import ATP-binding protein fbpC OS=Pse... [more]
FBPC_ECOLI4.194e-1228.73Fe(3+) ions import ATP-binding protein fbpC OS=Esc... [more]
CYSA2_CHRVO4.194e-1233.53Sulfate/thiosulfate import ATP-binding protein cys... [more]
ATM1_GIBZE4.194e-1230.51Iron-sulfur clusters transporter ATM1, mitochondri... [more]
Y691_RICTY5.477e-1226.09Putative export ATP-binding/permease protein RT069... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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