CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_SHIFL (Macrolide export ATP-binding/permease protein macB OS=Shigella flexneri GN=macB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 66/218 (30.28%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 144 LTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALA--GRLGSNT-RQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKER---AEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770 L +D+ + P G ++ +L+G++ GE++AI+G SG GKSTL++ L + S T R AG+ + ALA ++ Q L+ LTV + V ++P L++K+R A+ ++ +GL+D + LSGGQ++RVSI ++ +++ DEPT LDS + VM+ + +L R H T+I H P Sbjct: 5 LELKDIRRSYPAGDEQVE--VLKGISLNIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDIATLDADALAQLRREHFGFIFQRYHLLPHLTVEQNV------EVPAVYAGLERKQRLLRAQELLQRLGLEDRTE-----YYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGH-----TVIIVTHDP 204
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_SHIDS (Macrolide export ATP-binding/permease protein macB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=macB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 66/218 (30.28%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 144 LTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALA--GRLGSNT-RQAGEILINGRKRALAY---GTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKER---AEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770 L +D+ + P G ++ +L+G+T GE++AI+G SG GKSTL++ L + S T R AG+ + ALA ++ Q L++ LT + V ++P L++K+R A+ ++ +GL+D + LSGGQ++RVSI ++ +++ DEPT LDS + VM+ + +L R H T+I H P Sbjct: 5 LELKDIRRSYPAGDEQVE--VLKGITLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLHREHFGFIFQRYHLLSHLTAEQNV------EVPAVYAGLERKQRLLRAQELLQRLGLEDRTE-----YYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGH-----TVIIVTHDP 204
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_ECO57 (Macrolide export ATP-binding/permease protein macB OS=Escherichia coli O157:H7 GN=macB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 66/218 (30.28%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 144 LTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALA--GRLGSNT-RQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKER---AEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770 L +D+ + P G ++ +L+G+T GE++AI+G SG GKSTL++ L + S T R AG+ + ALA ++ Q L++ LT + V ++P L++K+R A+ ++ +GL+D + LSGGQ++RVSI ++ +++ DEPT LDS + VM+ + +L R H T+I H P Sbjct: 5 LELKDIRRSYPAGDEQVE--VLKGITLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNV------EVPAVYAGLERKQRLLRAQELLQRLGLEDRTE-----YYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSCEQVMAILHQLRDRGH-----TVIIVTHDP 204
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LKTB_PASSP (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica-like sp. (strain 5943B) GN=lktB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 60/197 (30.46%), Postives = 97/197 (49.24%), Query Frame = 3 Query: 201 SILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-----SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 +IL + + GE++ I+G SG GKSTL L + G++LI+G ALA V QD+ L+ ++ E + S + + K A I ++ ++ NT +G GA GLSGGQ++R++I ++ PK+L DE TS LD + + +M + K+ Q RT+I H+ S+ Sbjct: 484 TILNNVNLEIKKGEVIGIVGRSGSGKSTLTKLLQRFY---IPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNR-SIRENIALSEPGMSMERVIYAAKLAGAHDFISDV--REGYNTIVGEQGA-GLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQ------GRTVILIAHRLST 667
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LKTB_AGGAC (Leukotoxin translocation ATP-binding protein lktB OS=Aggregatibacter actinomycetemcomitans GN=lktB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 69/249 (27.71%), Postives = 118/249 (47.39%), Query Frame = 3 Query: 45 AISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-----SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 +++R +V+ S + N TA S+++ E G+ F + K + IL + GE++ I+G SG GKSTL + + G++LI+G ALA V QD+ L+ ++ E + + + + K A I E L++ NT +G GA GLSGGQ++R++I ++ P++L DE TS LD + +M + K+ Q +RT++ H+ S+ Sbjct: 440 SVTRLGDVLNSPTENNTA--SVSLPEIQGEISFRN-------IKFRYKPDSPMILNNINLDISQGEVIGIVGRSGSGKSTLTKLIQRFY---IPEQGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNR-SIRENIALTNPGMPMEKVIAAAKLAGAHDFISE--LREGYNTVVGEQGA-GLSGGQRQRIAIARALVNNPRILIFDEATSALDYESENIIMHNMHKICQ------NRTVLIIAHRLST 666
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_PSEPF (Fe(3+) ions import ATP-binding protein fbpC OS=Pseudomonas fluorescens (strain Pf0-1) GN=fbpC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 59/181 (32.60%), Postives = 89/181 (49.17%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING-----RKRAL-AYGTS-AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 G ++ L + G I+GPSG GK+TLL +AG AG +++NG R A+ AY YV QD AL +TV++ + + T + ER + + + L M TR W + LSGGQ++RVS+ + RP+L+ LDEP S LD+ + +A+L Sbjct: 14 GAQTALDSINLSVPTGSRTVIVGPSGSGKTTLLRMIAG---FEFPDAGSLMLNGQTLVDRTHAVPAYQRQIGYVPQDGALFPHMTVADNIGFGL------AETGSARAERIQALMDNVALNADMATR---WPHE-LSGGQQQRVSLARALAQRPRLMLLDEPFSALDTGLRGAMRKMVARL 181
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_ECOLI (Fe(3+) ions import ATP-binding protein fbpC OS=Escherichia coli (strain K12) GN=fbpC PE=3 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK---RALAYGTSAYVTQDDALITTLTVSEAVYYSAQ-LQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 G+ +++ + G+++ ++GPSGCGK+T+L +AG G+I I+G R++ V Q AL +++ E V Y + L +P K + KE M E G +D +I SGGQ++RV++ ++ +PK+L DEP S LD+ + +I +L ++ Sbjct: 17 GSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGL---EKPSEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLE-GFEDRFVDQI--------SGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQ 185
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA2_CHRVO (Sulfate/thiosulfate import ATP-binding protein cysA 2 OS=Chromobacterium violaceum GN=cysA2 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 56/167 (33.53%), Postives = 80/167 (47.90%), Query Frame = 3 Query: 231 RPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 R GE + ++GPSGCGK+TLL +AG + AG I ++GR + A A V Q AL LTV++ + Y L K R + +GL + G LSGGQ++RV++ + T P LL LDEP S LD+ + + L +R Sbjct: 37 RKGEFVCLLGPSGCGKTTLLRLIAGL---DLPDAGAIRLSGRDITRTAPAKRDYGIVFQSYALFPNLTVADNIAYG----LTPRRDKAGHAHRVRELLDMVGLPGSE-----GKYPSQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVRDKLREELKGLQRR 191
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ATM1_GIBZE (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Gibberella zeae GN=ATM1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 54/177 (30.51%), Postives = 87/177 (49.15%), Query Frame = 3 Query: 195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLL-------DALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRI 704 NR IL+ L+ G+ +A++GPSGCGKSTLL D GR+ + + ++ + +R++ V QD L TV + Y + + + + K+ TI+ D T++G G +SGG+K+R+++ +L P LLF DE TS LD+ +M I Sbjct: 451 NRPILRDLSLTIPAGKKVAVVGPSGCGKSTLLRLLFRSYDVQGGRVLIDDQDIRDVDLESLRRSI-----GVVPQDTPLFND-TVEHNIRYGSINATHEEVVAVAKRAHVHNTIQ--SFPDGYETKVGERGLM-ISGGEKQRLAVSRILLKDPPLLFFDEATSALDTHTEQALMMNI 618
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y691_RICTY (Putative export ATP-binding/permease protein RT0691 OS=Rickettsia typhi GN=RT0691 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 66/253 (26.09%), Postives = 121/253 (47.83%), Query Frame = 3 Query: 33 IPVPAISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS-----AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 +P A+ R +++ S +++N + D V + ++++ T + N I+ ++ + + I+G SG GKSTL+ L L + G ILIN + + T AYV Q+ ++ + S ++ + + + ++ E + K L D +NT+IG G + LSGGQK+R++I +L +PK+L LDE S LD+ + +++ I K+ + II+ H+ SS Sbjct: 303 LPTTALERIITIIDKISIVHNNYYALN----NPDTVSIEFKNVDFTY---NSRPNLKIINNMSLKINANKFVGIVGRSGAGKSTLIQLL---LRFYRQDNGTILINNQDISRINPTDIRKFIAYVPQEASIFSDTIKSNIIFGNNKASDYEINEIIKITGIEEFSNK---LHDGINTKIGEKGVR-LSGGQKQRIAIARALLRKPKILLLDEAMSALDTMSEQKLLNAIKKI------MKGNIIISIAHRISS 535 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |