CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y5847_STRAW (Putative ABC transporter ATP-binding protein SAV_5847 OS=Streptomyces avermitilis GN=SAV_5847 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 64/184 (34.78%), Postives = 92/184 (50.00%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQA--GEILINGRK------RALAYGTSAYVTQDDA--LITTLTVSEAVYYSAQLQL-PDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIA 755
            GEL+ ++GPSG GKST+L A++G +   T     G + + GR       R LA      V QD     +T     E  Y    L + PD M     + R E T+  +GL +  +  I       LSGGQ++RV+I   +   PK+L LDEPTS LD AA+  V   +A L +  H +G+  ++A
Sbjct:   29 GELVLLVGPSGVGKSTVLGAVSGLVPHFTGGTLRGRVTVAGRDTRTHKPRELA-DVVGTVGQDPLSHFVTDTVEDELAYGMESLGIAPDVM-----RRRVEETLDLLGLAELRDRPIST-----LSGGQQQRVAIGSVLTPHPKVLVLDEPTSALDPAAAEEV---LAVLQRLVHDLGTTVLMA 198          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_TRIEI (Spermidine/putrescine import ATP-binding protein potA OS=Trichodesmium erythraeum (strain IMS101) GN=potA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 52/161 (32.30%), Postives = 80/161 (49.69%), Query Frame = 3
Query:  207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY------VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671
            ++G+    R GE  +I+GPSGCGK+T L  +A   G  T  AGEI+I G+  +    T AY      V Q  AL   L+V + + +  +++        +K  +A   +K     D    +I        SGGQ++RV++   ++ RP +L LDEP   LD
Sbjct:   34 VKGVDFNIRQGEFFSILGPSGCGKTTTLRLIA---GFETPSAGEIIIRGQSMS---QTPAYRRPVNTVFQSYALFNHLSVKDNIAFGLRIKRLGKTETEEKVAQALQLVKMEKFADRYPNQI--------SGGQQQRVALARALVNRPAVLLLDEPLGALD 180          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACHK (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus thuringiensis subsp. konkukian GN=potA PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY---VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671
            GN+ I+  L+   + GE L I+GPSGCGK+TLL  +A   G  T   G +L++  K         +   V Q  AL   + V + + +  ++Q    +   ++KERAE  ++   L +  N +        LSGGQ++RV+I   ++  P++L LDEP   LD
Sbjct:   15 GNQVIIPPLSLDIKEGEFLTILGPSGCGKTTLLRMIA---GFETPTKGNLLLDDEKINDLPPYKRHMNLVFQHYALFPHMNVEKNICFGMKMQ---KVPAAEQKERAEEAMRLTQLLEFRNRK-----PAKLSGGQQQRVAIARAIVNNPRVLLLDEPLGALD 166          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACCZ (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus cereus (strain ZK / E33L) GN=potA PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY---VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671
            GN+ I+  L+   + GE L I+GPSGCGK+TLL  +A   G  T   G +L++  K         +   V Q  AL   + V + + +  ++Q    +   ++KERAE  ++   L +  N +        LSGGQ++RV+I   ++  P++L LDEP   LD
Sbjct:   15 GNQVIIPPLSLDIKEGEFLTILGPSGCGKTTLLRMIA---GFETPTKGNLLLDDEKINDLPPYKRHMNLVFQHYALFPHMNVEKNICFGMKMQ---KVPAAEQKERAEEAMRLTQLLEFRNRK-----PAKLSGGQQQRVAIARAIVNNPRVLLLDEPLGALD 166          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACC1 (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus cereus (strain ATCC 10987) GN=potA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY---VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671
            GN+ I+  L+   + GE L I+GPSGCGK+TLL  +A   G  T   G +L++  K         +   V Q  AL   + V + + +  ++Q    +   ++KERAE  ++   L +  N +        LSGGQ++RV+I   ++  P++L LDEP   LD
Sbjct:   15 GNQVIIPPLSLDIKEGEFLTILGPSGCGKTTLLRMIA---GFETPTKGNLLLDDEKINDLPPYKRHMNLVFQHYALFPHMNVEKNICFGMKMQ---KVPAAEQKERAEEAMRLTQLLEFRNRK-----PAKLSGGQQQRVAIARAIVNNPRVLLLDEPLGALD 166          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACAH (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus thuringiensis (strain Al Hakam) GN=potA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY---VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671
            GN+ I+  L+   + GE L I+GPSGCGK+TLL  +A   G  T   G +L++  K         +   V Q  AL   + V + + +  ++Q    +   ++KERAE  ++   L +  N +        LSGGQ++RV+I   ++  P++L LDEP   LD
Sbjct:   15 GNQVIIPPLSLDIKEGEFLTILGPSGCGKTTLLRMIA---GFETPTKGNLLLDDEKINDLPPYKRHMNLVFQHYALFPHMNVEKNICFGMKMQ---KVPAAEQKERAEEAMRLTQLLEFRNRK-----PAKLSGGQQQRVAIARAIVNNPRVLLLDEPLGALD 166          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC2_PSEAE (Phosphonates import ATP-binding protein phnC 2 OS=Pseudomonas aeruginosa GN=phnC2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 54/192 (28.12%), Postives = 94/192 (48.96%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSA----------YVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            GE++A++G SG GKSTLL  +AG    +    G I + GR+   +   S           Y+ Q   L+  L+V + V      ++P     L     ++K +A   +  +GL D       G  A  LSGGQ++RV+I   +  + +++  DEP + LD  ++  VM  +A +++ D     +T++ ++HQ
Sbjct:   30 GEMVALIGASGSGKSTLLRHVAGLARCDRDNGGSIDVLGRRLQASGRLSGEVRRLRADIGYIFQQFNLVNRLSVLDNVLLGFLGRMPRWRGSLGLFSAEQKRQALEALARVGLAD-----FAGQRASTLSGGQQQRVAIARALTQKAEVILADEPIASLDPESARKVMDILADINRHD----GKTVVVTLHQ 212          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC1_PSEAB (Phosphonates import ATP-binding protein phnC 1 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=phnC1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 54/192 (28.12%), Postives = 94/192 (48.96%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSA----------YVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767
            GE++A++G SG GKSTLL  +AG    +    G I + GR+   +   S           Y+ Q   L+  L+V + V      ++P     L     ++K +A   +  +GL D       G  A  LSGGQ++RV+I   +  + +++  DEP + LD  ++  VM  +A +++ D     +T++ ++HQ
Sbjct:   30 GEMVALIGASGSGKSTLLRHVAGLARCDRDNGGSIDVLGRRLQASGRLSGEVRRLRADIGYIFQQFNLVNRLSVLDNVLLGFLGRMPRWRGSLGLFSAEQKRQALEALARVGLAD-----FAGQRASTLSGGQQQRVAIARALTQKAEVILADEPIASLDPESARKVMDILADINRHD----GKTVVVTLHQ 212          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: METN_CHLAB (Methionine import ATP-binding protein metN OS=Chlamydophila abortus GN=metN PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 56/184 (30.43%), Postives = 92/184 (50.00%), Query Frame = 3
Query:  195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            N  IL  ++    PGE++ I+G SG GKSTLL  L   +   +   G I I G           R       AYV+Q   L    TV E + Y  +++ P+ MTK   +E+ +  +    L +  +          LSGGQK++V+I I +++ P++L  DE TS LD  ++  V+ ++++L++
Sbjct:   20 NHRILHRISFSVYPGEIVGIIGHSGSGKSTLLRCLDFLIEPTS---GSISIAGFHTSSPIEKISRTAFAKRVAYVSQSCGLFLAKTVFENIAYPLKIRCPE-MTKALIEEKVDDVLHFFNLYERKHAY-----PSRLSGGQKQKVAIAIAIVSDPRVLLCDEITSALDPRSTEDVVDKLSQLNE 194          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD_NOVAD (Lipoprotein-releasing system ATP-binding protein lolD OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=lolD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 59/191 (30.89%), Postives = 90/191 (47.12%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDA---LAGRLGSNTRQAG---EILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIAS 758
            +L+G+    RPGE++A++GPSG GKST+L A   L G        AG     L    + AL      +V Q   L+      E V      QL     +   + RA   +  +GL   ++ R        LSGG+++RV++   +  RP+++  DEPT  LD A +  V+    KL +   G GS  +IA+
Sbjct:   24 VLRGVNLEIRPGEIVALLGPSGSGKSTMLQAIGLLEGGFSGLIEIAGTDASKLSGDDRTALRRDHLGFVYQFHHLLPDFNAIENVVLP---QLVAGTDRAVAEARAAELLSALGLAKRLDHR-----PSQLSGGEQQRVAVARALANRPEMVLADEPTGNLDEATADRVLEEFLKLVR---GEGSAALIAT 203          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5847_STRAW5.477e-1234.78Putative ABC transporter ATP-binding protein SAV_5... [more]
POTA_TRIEI5.477e-1232.30Spermidine/putrescine import ATP-binding protein p... [more]
POTA_BACHK5.477e-1232.52Spermidine/putrescine import ATP-binding protein p... [more]
POTA_BACCZ5.477e-1232.52Spermidine/putrescine import ATP-binding protein p... [more]
POTA_BACC15.477e-1232.52Spermidine/putrescine import ATP-binding protein p... [more]
POTA_BACAH5.477e-1232.52Spermidine/putrescine import ATP-binding protein p... [more]
PHNC2_PSEAE5.477e-1228.13Phosphonates import ATP-binding protein phnC 2 OS=... [more]
PHNC1_PSEAB5.477e-1228.13Phosphonates import ATP-binding protein phnC 1 OS=... [more]
METN_CHLAB5.477e-1230.43Methionine import ATP-binding protein metN OS=Chla... [more]
LOLD_NOVAD5.477e-1230.89Lipoprotein-releasing system ATP-binding protein l... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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