CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y5847_STRAW (Putative ABC transporter ATP-binding protein SAV_5847 OS=Streptomyces avermitilis GN=SAV_5847 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 64/184 (34.78%), Postives = 92/184 (50.00%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQA--GEILINGRK------RALAYGTSAYVTQDDA--LITTLTVSEAVYYSAQLQL-PDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIA 755 GEL+ ++GPSG GKST+L A++G + T G + + GR R LA V QD +T E Y L + PD M + R E T+ +GL + + I LSGGQ++RV+I + PK+L LDEPTS LD AA+ V +A L + H +G+ ++A Sbjct: 29 GELVLLVGPSGVGKSTVLGAVSGLVPHFTGGTLRGRVTVAGRDTRTHKPRELA-DVVGTVGQDPLSHFVTDTVEDELAYGMESLGIAPDVM-----RRRVEETLDLLGLAELRDRPIST-----LSGGQQQRVAIGSVLTPHPKVLVLDEPTSALDPAAAEEV---LAVLQRLVHDLGTTVLMA 198
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_TRIEI (Spermidine/putrescine import ATP-binding protein potA OS=Trichodesmium erythraeum (strain IMS101) GN=potA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 52/161 (32.30%), Postives = 80/161 (49.69%), Query Frame = 3 Query: 207 LQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY------VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671 ++G+ R GE +I+GPSGCGK+T L +A G T AGEI+I G+ + T AY V Q AL L+V + + + +++ +K +A +K D +I SGGQ++RV++ ++ RP +L LDEP LD Sbjct: 34 VKGVDFNIRQGEFFSILGPSGCGKTTTLRLIA---GFETPSAGEIIIRGQSMS---QTPAYRRPVNTVFQSYALFNHLSVKDNIAFGLRIKRLGKTETEEKVAQALQLVKMEKFADRYPNQI--------SGGQQQRVALARALVNRPAVLLLDEPLGALD 180
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACHK (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus thuringiensis subsp. konkukian GN=potA PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY---VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671 GN+ I+ L+ + GE L I+GPSGCGK+TLL +A G T G +L++ K + V Q AL + V + + + ++Q + ++KERAE ++ L + N + LSGGQ++RV+I ++ P++L LDEP LD Sbjct: 15 GNQVIIPPLSLDIKEGEFLTILGPSGCGKTTLLRMIA---GFETPTKGNLLLDDEKINDLPPYKRHMNLVFQHYALFPHMNVEKNICFGMKMQ---KVPAAEQKERAEEAMRLTQLLEFRNRK-----PAKLSGGQQQRVAIARAIVNNPRVLLLDEPLGALD 166
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACCZ (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus cereus (strain ZK / E33L) GN=potA PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY---VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671 GN+ I+ L+ + GE L I+GPSGCGK+TLL +A G T G +L++ K + V Q AL + V + + + ++Q + ++KERAE ++ L + N + LSGGQ++RV+I ++ P++L LDEP LD Sbjct: 15 GNQVIIPPLSLDIKEGEFLTILGPSGCGKTTLLRMIA---GFETPTKGNLLLDDEKINDLPPYKRHMNLVFQHYALFPHMNVEKNICFGMKMQ---KVPAAEQKERAEEAMRLTQLLEFRNRK-----PAKLSGGQQQRVAIARAIVNNPRVLLLDEPLGALD 166
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACC1 (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus cereus (strain ATCC 10987) GN=potA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY---VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671 GN+ I+ L+ + GE L I+GPSGCGK+TLL +A G T G +L++ K + V Q AL + V + + + ++Q + ++KERAE ++ L + N + LSGGQ++RV+I ++ P++L LDEP LD Sbjct: 15 GNQVIIPPLSLDIKEGEFLTILGPSGCGKTTLLRMIA---GFETPTKGNLLLDDEKINDLPPYKRHMNLVFQHYALFPHMNVEKNICFGMKMQ---KVPAAEQKERAEEAMRLTQLLEFRNRK-----PAKLSGGQQQRVAIARAIVNNPRVLLLDEPLGALD 166
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACAH (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus thuringiensis (strain Al Hakam) GN=potA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY---VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671 GN+ I+ L+ + GE L I+GPSGCGK+TLL +A G T G +L++ K + V Q AL + V + + + ++Q + ++KERAE ++ L + N + LSGGQ++RV+I ++ P++L LDEP LD Sbjct: 15 GNQVIIPPLSLDIKEGEFLTILGPSGCGKTTLLRMIA---GFETPTKGNLLLDDEKINDLPPYKRHMNLVFQHYALFPHMNVEKNICFGMKMQ---KVPAAEQKERAEEAMRLTQLLEFRNRK-----PAKLSGGQQQRVAIARAIVNNPRVLLLDEPLGALD 166
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC2_PSEAE (Phosphonates import ATP-binding protein phnC 2 OS=Pseudomonas aeruginosa GN=phnC2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 54/192 (28.12%), Postives = 94/192 (48.96%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSA----------YVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 GE++A++G SG GKSTLL +AG + G I + GR+ + S Y+ Q L+ L+V + V ++P L ++K +A + +GL D G A LSGGQ++RV+I + + +++ DEP + LD ++ VM +A +++ D +T++ ++HQ Sbjct: 30 GEMVALIGASGSGKSTLLRHVAGLARCDRDNGGSIDVLGRRLQASGRLSGEVRRLRADIGYIFQQFNLVNRLSVLDNVLLGFLGRMPRWRGSLGLFSAEQKRQALEALARVGLAD-----FAGQRASTLSGGQQQRVAIARALTQKAEVILADEPIASLDPESARKVMDILADINRHD----GKTVVVTLHQ 212
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC1_PSEAB (Phosphonates import ATP-binding protein phnC 1 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=phnC1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 54/192 (28.12%), Postives = 94/192 (48.96%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSA----------YVTQDDALITTLTVSEAVYYSAQLQLPDTMTKL-----QKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 GE++A++G SG GKSTLL +AG + G I + GR+ + S Y+ Q L+ L+V + V ++P L ++K +A + +GL D G A LSGGQ++RV+I + + +++ DEP + LD ++ VM +A +++ D +T++ ++HQ Sbjct: 30 GEMVALIGASGSGKSTLLRHVAGLARCDRDNGGSIDVLGRRLQASGRLSGEVRRLRADIGYIFQQFNLVNRLSVLDNVLLGFLGRMPRWRGSLGLFSAEQKRQALEALARVGLAD-----FAGQRASTLSGGQQQRVAIARALTQKAEVILADEPIASLDPESARKVMDILADINRHD----GKTVVVTLHQ 212
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: METN_CHLAB (Methionine import ATP-binding protein metN OS=Chlamydophila abortus GN=metN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 56/184 (30.43%), Postives = 92/184 (50.00%), Query Frame = 3 Query: 195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 N IL ++ PGE++ I+G SG GKSTLL L + + G I I G R AYV+Q L TV E + Y +++ P+ MTK +E+ + + L + + LSGGQK++V+I I +++ P++L DE TS LD ++ V+ ++++L++ Sbjct: 20 NHRILHRISFSVYPGEIVGIIGHSGSGKSTLLRCLDFLIEPTS---GSISIAGFHTSSPIEKISRTAFAKRVAYVSQSCGLFLAKTVFENIAYPLKIRCPE-MTKALIEEKVDDVLHFFNLYERKHAY-----PSRLSGGQKQKVAIAIAIVSDPRVLLCDEITSALDPRSTEDVVDKLSQLNE 194
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD_NOVAD (Lipoprotein-releasing system ATP-binding protein lolD OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=lolD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 59/191 (30.89%), Postives = 90/191 (47.12%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDA---LAGRLGSNTRQAG---EILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIAS 758 +L+G+ RPGE++A++GPSG GKST+L A L G AG L + AL +V Q L+ E V QL + + RA + +GL ++ R LSGG+++RV++ + RP+++ DEPT LD A + V+ KL + G GS +IA+ Sbjct: 24 VLRGVNLEIRPGEIVALLGPSGSGKSTMLQAIGLLEGGFSGLIEIAGTDASKLSGDDRTALRRDHLGFVYQFHHLLPDFNAIENVVLP---QLVAGTDRAVAEARAAELLSALGLAKRLDHR-----PSQLSGGEQQRVAVARALANRPEMVLADEPTGNLDEATADRVLEEFLKLVR---GEGSAALIAT 203 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |