CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD_HAES1 (Lipoprotein-releasing system ATP-binding protein lolD OS=Haemophilus somnus (strain 129Pt) GN=lolD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 56/181 (30.94%), Postives = 86/181 (47.51%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---------AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 +L+ ++ + GEL+AI+G SG GKSTLL L G + +GE+ I+G+ A +V Q L+ T E V L K + K+RAE + +GL + + LSGG+++RV+I ++ PKL+ DEPT LD + + I KL+Q Sbjct: 23 VLKEVSFSMQEGELIAIVGSSGSGKSTLLHMLGGL---DQPTSGEVFIHGQSLQRATQDELAKLRNQYLGFVYQFHHLMADFTALENVMMP---MLISHKNKTEAKDRAENILSAVGLAKRILHK-----PSALSGGERQRVAIARSLVNNPKLVLADEPTGNLDHKTTESIFELIQKLNQ 192
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HLYB_PROVU (Alpha-hemolysin translocation ATP-binding protein hlyB OS=Proteus vulgaris GN=hlyB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 59/196 (30.10%), Postives = 94/196 (47.96%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-----SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 IL + + GE++ I+G SG GKSTL + + G++LI+G ALA V QD+ L+ + + + + + K A I E L++ NT +G GA GLSGGQ++R++I ++ PK+L DE TS LD + + +M + K+ Q RT+I H+ S+ Sbjct: 484 ILNNINLNIKQGEIIGIVGRSGSGKSTLTKLIQRFY---IPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNIALADPGMPV-EKVIHAAKLAGAHDFISE--LREGYNTIVGEQGA-GLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICQ------GRTVIIIAHRLST 666
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCBB_HUMAN (Bile salt export pump OS=Homo sapiens GN=ABCB11 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 60/198 (30.30%), Postives = 96/198 (48.48%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLL-------DALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 IL L +PGE+ A++GPSG GKST L D G + + + I + + V Q+ L +T T++E + Y + + + + K+ A I M L +T +G G + +SGGQK+RV+I ++ PK+L LD TS LD+ + V ++K+ HG TII+ H+ S+ Sbjct: 437 ILNDLNMVIKPGEMTALVGPSGAGKSTALQLIQRFYDPCEGMVTVDGHDIRSLNIQWLRDQIGI-----VEQEPVLFST-TIAENIRYGREDATMEDIVQAAKEANAYNFI--MDLPQQFDTLVGEGGGQ-MSGGQKQRVAIARALIRNPKILLLDMATSALDNESEAMVQEVLSKI---QHG---HTIISVAHRLST 619
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCB9_MOUSE (ATP-binding cassette sub-family B member 9 OS=Mus musculus GN=Abcb9 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 51/172 (29.65%), Postives = 89/172 (51.74%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK-----RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRI 704 +LQ ++ PG++ A++GPSG GKS+ ++ L Q G +L++G+ + + V+Q+ L ++++ + Y + + + +K A I E LQD +T G GA+ LSGGQK+RV++ ++ P +L LDE TS LD+ + Y + I Sbjct: 517 VLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFY---PLQGGRVLLDGKPIGAYDHKYLHRVISLVSQEPVLFAR-SITDNISYGLPTVPFEMVVEAAQKANAHGFIME--LQDGYSTETGEKGAQ-LSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAI 681
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YDBJ_BACSU (Uncharacterized ABC transporter ATP-binding protein ydbJ OS=Bacillus subtilis GN=ydbJ PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12 Identity = 52/185 (28.11%), Postives = 93/185 (50.27%), Query Frame = 3 Query: 183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS----AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRD 725 +K G++ IL+ ++ GE++ ++GP+G GK+TL+ + G L N+ G + I+G + + + + ++ LT E + + A M K ER + ++ +GL A++ ++ K S G ++R+ I +L RPKLL LDEPT+GLD A I +L + + Sbjct: 13 KKIGSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIRIIVGLLKQNS---GSVTISGFQHDTEFEKAMEAVGAIVENPEFYPYLTGWENLKHFAN------MHKKIADERLDEVVERVGLTSAIHDKV-----KTYSLGMRQRLGIAQAILHRPKLLILDEPTNGLDPAGMKDFRDHIKELAEME 183
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y3423_BRUAB (Putative ATP-binding protein BruAb2_1123 OS=Brucella abortus GN=BruAb2_1123 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12 Identity = 50/183 (27.32%), Postives = 88/183 (48.09%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVF 785 GE + ++GPSGCGKST ++ AG L + GEIL+ + + Q AL LTV + V + + M++++++E ++ + +GL D + K LSGG K+R +I P++L +DEP + LD+ ++ ++ R+ RT++ H V+ Sbjct: 30 GEFVTVVGPSGCGKSTAMNIAAGLLQPS---GGEILVGDKPVTGPGPERGVIFQQYALFPWLTVRQNVEFGLSVA---GMSRVKRREISDHYLSLVGLTDFADAL-----PKALSGGMKQRCAIARAYAAAPEILLMDEPFAALDALTRVHMQDQLLDAWSRER----RTVMFITHDVDEAVY 197
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: UGPC_VIBCH (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Vibrio cholerae GN=ugpC PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12 Identity = 59/171 (34.50%), Postives = 90/171 (52.63%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK---RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGS 740 GE + ++GPSGCGKS++L ++AG L S T +GEI + GR+ A A V Q+ AL ++V + + Y + + D T K + T+K D + LSGGQ++RV++ ++ P+L DEP S LD+A ++ I KL QR+ GV S Sbjct: 28 GEFIVLVGPSGCGKSSILRSIAG-LESIT--SGEIHLAGRRVDNEKPANRDIAMVFQNYALYPHMSVYDNLAYGLKNRGVDKQTIAAKIAKVAKTLKIEEYLDRKPAK--------LSGGQRQRVAMGRAIVRDPQLFLFDEPLSNLDAALRAHMRLEIKKL-QRELGVTS 186
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: UGPC_PARDP (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Paracoccus denitrificans (strain Pd 1222) GN=ugpC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12 Identity = 57/183 (31.15%), Postives = 98/183 (53.55%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAG--RLGSNTRQAGEILING---RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQL-QLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 GN+ ++ G+T GE + I+GPSGCGKSTLL +AG + + T + G ++N R+R + A V Q+ AL ++V E + Y ++ +LP T + + + A M + L+ ++ + + LSGGQ++RV++ ++ P L LDEP S LD+ + +I ++ R Sbjct: 15 GNQ-VIHGITMEIADGEFVVIVGPSGCGKSTLLRMVAGLEAISAGTVEIGGKVVNDLEPRQRDI-----AMVFQNYALYPHMSVRENMAYGLKIAKLPKTEIEARVAKAATM----LELEPYLDRK-----PRALSGGQRQRVAMGRALVREPAALLLDEPLSNLDAKLRVQMRLQIKEMHLR 182
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: THIQ_HAEI8 (Thiamine import ATP-binding protein thiQ OS=Haemophilus influenzae (strain 86-028NP) GN=thiQ PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12 Identity = 62/185 (33.51%), Postives = 95/185 (51.35%), Query Frame = 3 Query: 231 RPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK--RALAYGTS-AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL-DQRDHGVGSRTIIASIHQPS 773 + GE +AI+G SG GKSTLL+ +AG GEI +N + R+ Y + + Q++ L LTV + + + L T + +K E+A ++ GL D + LSGGQK+RV++ +L +L LDEP S LD +++ IAKL D++D T++ HQPS Sbjct: 23 KAGERVAIIGESGAGKSTLLNLIAG---FEFPAQGEIWLNDKNHTRSAPYERPVSMLFQENNLFPHLTVQQNLALGIKPSLKLTALEQEKIEQAACSV---GLGDYLERL-----PNSLSGGQKQRVALARCLLRDKPILLLDEPFSALDQKLRVEMLALIAKLCDEKD-----LTLLLVTHQPS 191
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_ECOUT (Aliphatic sulfonates import ATP-binding protein ssuB OS=Escherichia coli (strain UTI89 / UPEC) GN=ssuB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12 Identity = 62/193 (32.12%), Postives = 91/193 (47.15%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782 +L L + G+ +A++G SG GKSTLL LAG T AG++L A + + QD L+ +V + V K Q ++ A + +GL++ R G W A LSGGQK+RV++ ++ RP LL LDEP LD+ + I L Q +HG T++ H S V Sbjct: 26 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGL---ETPTAGDVLAGTTPLAEIQDDTRMMFQDARLLPWKSVIDNVGLGL---------KGQWRDAARQALAAVGLEN----RAGEWPA-ALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQ-EHGF---TVLLVTHDVSEAV 197 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |