CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_ECOK1 (Aliphatic sulfonates import ATP-binding protein ssuB OS=Escherichia coli O1:K1 / APEC GN=ssuB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 62/193 (32.12%), Postives = 91/193 (47.15%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782
            +L  L  +   G+ +A++G SG GKSTLL  LAG     T  AG++L      A     +  + QD  L+   +V + V             K Q ++ A   +  +GL++    R G W A  LSGGQK+RV++   ++ RP LL LDEP   LD+     +   I  L Q +HG    T++   H  S  V
Sbjct:   26 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGL---ETPTAGDVLAGTTPLAEIQDDTRMMFQDARLLPWKSVIDNVGLGL---------KGQWRDAARQALAAVGLEN----RAGEWPA-ALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQ-EHGF---TVLLVTHDVSEAV 197          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_DELAC (Aliphatic sulfonates import ATP-binding protein ssuB OS=Delftia acidovorans GN=ssuB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 53/175 (30.29%), Postives = 84/175 (48.00%), Query Frame = 3
Query:  198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722
            + +L  L     PG+ +A++G SG GK+TLL ALAG L    R +G         A+A+G  + + QD  L+  LTV + +      Q          +  A   ++E+GL D    +   W A  LSGGQK+R ++   +L  P +L  DEP   LD+     +   + ++ +R
Sbjct:   22 KQVLDDLGLDIAPGQFVALLGESGSGKTTLLRALAG-LDVEARSSGT--------AVAHGNVSVLFQDSRLLPWLTVLDNLTLGLDAQAV--------RPAAAQLLREVGLAD----KAAAWPAS-LSGGQKQRAALARSLLREPHVLLADEPFGALDALTRLRMQGLLRRMVER 174          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SMOK_RHOSH (ATP-binding transport protein smoK OS=Rhodobacter sphaeroides GN=smoK PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 63/197 (31.98%), Postives = 94/197 (47.72%), Query Frame = 3
Query:  165 VTVPDGQKK-GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKE---RAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            +T+ + QK+ G   ++  L      GE +  +GPSGCGKSTLL  +A   G      G+I+I+GR        KR L     A V Q  AL   +TV + + +      P  M K++ +E   R     K + L + ++ R G      LSGGQ++RV+I   ++  P     DEP S LD+A    +   I +L Q
Sbjct:    4 ITLRNVQKRFGEAVVIPSLDLDIEDGEFVVFVGPSGCGKSTLLRLIA---GLEDVSDGQIMIDGRDATEMPPAKRGL-----AMVFQSYALYPHMTVKKNIAF------PLRMAKMEPQEIERRVSNAAKILNLTNYLDRRPG-----QLSGGQRQRVAIGRAIVREPAAFLFDEPLSNLDAALRVNMRLEITELHQ 181          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PSTB_CHRVO (Phosphate import ATP-binding protein pstB OS=Chromobacterium violaceum GN=pstB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 54/185 (29.19%), Postives = 94/185 (50.81%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAG--RLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALI-------TTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            GN   L+G+     P ++ A +GPSGCGKSTLL        L    R  GEI+++G+      G    V    A +       T   +S     +  ++L + ++K + ++R E  +++  L D +  ++   G   LSGGQ++R+ I   + ++P++L LDEPTS LD  ++ ++   I +L +
Sbjct:   21 GNFHALKGIQLEIAPRKVTAFIGPSGCGKSTLLRTFNRMYELYPGLRAEGEIMLDGQN---ILGRDIDVNLLRAKVGMVFQKPTPFPMSIYDNITFGVKLYEKLSKGEMEDRVEWALRKAALWDEVKDKLKQSG-NSLSGGQQQRLCIARAVASKPEVLLLDEPTSALDPISTAHIEELIHELKE 201          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PSTB1_STRMU (Phosphate import ATP-binding protein pstB 1 OS=Streptococcus mutans GN=pstB1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 53/168 (31.55%), Postives = 81/168 (48.21%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDAL--AGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITT------LTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671
            G +  L  ++    P E+ +++GPSG GKSTLL A+   G L       G I+ NG         +  + ++  ++        +T+ E V Y   L+L     K    E  E ++    + D +  R+    A GLSGGQ++RV I   + T PK++ LDEPTS LD
Sbjct:   16 GKKKALHSVSIDFYPNEITSLIGPSGSGKSTLLRAINRMGDLNPEVTVTGSIIYNGHNIYSRRTDTVELRKEIGMVFQQPNPFPMTIYENVVYG--LRLKGVKDKKILDEAVEKSLVGASIWDEVKDRLHD-SAIGLSGGQQQRVCIARVLATSPKIILLDEPTSALD 180          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_BACAN (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus anthracis GN=potA PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAY---VTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671
            GN+ I+  L+   + GE L I+GPSGCGK+TLL  +A   G  T   G +L++  K         +   V Q  AL   + V + + +  ++Q    +   ++KERAE  ++   L +  N +        LSGGQ++RV+I   ++  P++L LDEP   LD
Sbjct:   15 GNQVIIPPLSLDIKEGEFLTILGPSGCGKTTLLRMIA---GFETPTKGNLLLDDEKINDLPPYKRHMNLVFQHYALFPHMNVEKNICFGMKMQ---KVPVAEQKERAEEAMRLTQLLEFRNRK-----PAKLSGGQQQRVAIARAIVNNPRVLLLDEPLGALD 166          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC1_RHOP5 (Phosphonates import ATP-binding protein phnC 1 OS=Rhodopseudomonas palustris (strain BisA53) GN=phnC1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 63/196 (32.14%), Postives = 94/196 (47.96%), Query Frame = 3
Query:  177 DGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDAL---------AGRLGSN--TRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKK------ERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713
            D + K     L+G++ +   G+++ ++GPSG GKSTL+  +         + RLG    TR  G  L   R+R         + Q+ ALI  LTV E V  S +L          ++      +RA   +  +GL D ++ R     A  LSGGQ++RV I   +   P+LL +DEPT+ LD   S  VM  I +L
Sbjct:    8 DKRYKTGDLALKGVSLHIGAGDIVGLIGPSGAGKSTLIRCVNRLVPPTGGSIRLGDTELTRLGGADLRRARRRI------GMIFQEFALIERLTVMENVL-SGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSDQVDKR-----ADALSGGQRQRVGIARALAQDPELLLIDEPTASLDPKTSRQVMRLITEL 191          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MSBA_BURS3 (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia sp. (strain 383) GN=msbA PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 60/198 (30.30%), Postives = 94/198 (47.47%), Query Frame = 3
Query:  198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA-----LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            R  L  ++    PGE++A+ GPSG GK+TL++ L           G IL++G   A           A V+QD  L    T++  V Y    Q PD        E A +      + D ++T +GG G + LSGGQ++R++I   +     +L LDE TS LDS +  +V + + +L      +  RT +   H+ S+
Sbjct:  366 RPTLDRISFKVAPGEMIALAGPSGSGKTTLVNLLPRFFDPTD---GAILVDGVPVADYDLHALRSQMAMVSQDVVLFND-TIAANVAYG---QTPDRARVQAALEAANLADAVAAMPDGLDTLVGGNGMR-LSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALERL------MEGRTTLVIAHRLST 549          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LPTB_HAEIN (Lipopolysaccharide export system ATP-binding protein lptB OS=Haemophilus influenzae GN=lptB PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 50/186 (26.88%), Postives = 92/186 (49.46%), Query Frame = 3
Query:  195 NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRAL------AYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734
            +R ++  ++      E++ ++GP+G GK+T    + G +    +  G+I+I+G   +L      A     Y+ Q+ ++   LTV E +   A L++   +T  Q++E+A+  I+E  +    +        + LSGG++RRV I   +   PK + LDEP +G+D  +   +   I  L  R  GV
Sbjct:   15 SRKVVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMVVGLV---RQDQGKIVIDGEDISLLPMHNRAQRGIGYLPQEASIFRRLTVYENLM--AVLEIRKDLTPQQRREKADELIEEFNISHIRDNL-----GQALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVSDIKKIITDLRNRGLGV 190          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC_MANSM (Fe(3+) ions import ATP-binding protein fbpC OS=Mannheimia succiniciproducens (strain MBEL55E) GN=fbpC PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 50/182 (27.47%), Postives = 92/182 (50.55%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEM---GLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719
            G   ++  L    + G ++ ++GPSGCGK+T+L  +AG        +G+I I+G    K ++       V Q  AL   +++ + V Y  ++Q    + K ++K+R    ++ +   G +D    +I        SGGQ++RV++   ++ +PK+L  DEP S LD+     +  +I +L Q
Sbjct:   19 GKSVVIDDLDLVIKRGTMVTLLGPSGCGKTTILRLVAGL---ENPTSGQIFIDGEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLRMQ---NIAKEERKQRIREALELVDLAGFEDRFVDQI--------SGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMREKIRELQQ 186          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SSUB_ECOK17.154e-1232.12Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB_DELAC7.154e-1230.29Aliphatic sulfonates import ATP-binding protein ss... [more]
SMOK_RHOSH7.154e-1231.98ATP-binding transport protein smoK OS=Rhodobacter ... [more]
PSTB_CHRVO7.154e-1229.19Phosphate import ATP-binding protein pstB OS=Chrom... [more]
PSTB1_STRMU7.154e-1231.55Phosphate import ATP-binding protein pstB 1 OS=Str... [more]
POTA_BACAN7.154e-1232.52Spermidine/putrescine import ATP-binding protein p... [more]
PHNC1_RHOP57.154e-1232.14Phosphonates import ATP-binding protein phnC 1 OS=... [more]
MSBA_BURS37.154e-1230.30Lipid A export ATP-binding/permease protein msbA O... [more]
LPTB_HAEIN7.154e-1226.88Lipopolysaccharide export system ATP-binding prote... [more]
FBPC_MANSM7.154e-1227.47Fe(3+) ions import ATP-binding protein fbpC OS=Man... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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