CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC1_RHOSR (Fe(3+) ions import ATP-binding protein fbpC 1 OS=Rhodococcus sp. (strain RHA1) GN=fbpC1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 54/171 (31.58%), Postives = 78/171 (45.61%), Query Frame = 3
Query:  177 DGQKK--GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAG---RLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            DG  K  G  +IL+G+      G   AI+GPSGCGK+TLL  +AG           AG ++  G        +  YV QD AL    TV   V +            L ++ R    I E+    +++          LSGGQ++RV++   +   P+L+ LDEP S LD+
Sbjct:    8 DGVDKSFGGATILRGVAFAVESGSTTAIVGPSGCGKTTLLRLIAGFEKPDAGTIALAGRVVAGGGWAPAHRRSVGYVAQDGALFPHATVGANVGFG-----------LPRRARTPARIAELLEMVSLDPSYAARRPDQLSGGQQQRVALARALAREPELMLLDEPFSALDA 167          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA_SYNE7 (Sulfate/thiosulfate import ATP-binding protein cysA OS=Synechococcus elongatus (strain PCC 7942) GN=cysA PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 52/167 (31.14%), Postives = 83/167 (49.70%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH 728
            G L+A++GPSG GKSTLL  +AG        +G I + GR     ++      +V Q  AL   LTV + + +  +L       +   KE+    ++E+ L+    T +G      LSGGQ++RV++   +  +P++L LDEP   LD+     + S + KL    H
Sbjct:   34 GSLVALLGPSGSGKSTLLRLIAGL---EQPDSGRIFLTGRDATNESVRDRQIGFVFQHYALFKHLTVRKNIAFGLEL-------RKHTKEKVRARVEEL-LELVQLTGLGDRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKDLRSWLRKLHDEVH 189          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y4187_BRUSU (Putative ATP-binding protein BRA1187 OS=Brucella suis GN=BRA1187 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 50/183 (27.32%), Postives = 87/183 (47.54%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVF 785
            GE + ++GPSGCGKST ++  AG L  +    GEIL+  +           + Q  AL   LTV + V +   +     M++++++E ++  +  +GL D  +        K LSGG K+R +I       P++L +DEP   LD+    ++  ++     R+     RT++   H     V+
Sbjct:   30 GEFVTVVGPSGCGKSTAMNIAAGLLQPS---GGEILVGDKPVTGPGPERGVIFQQYALFPWLTVRQNVEFGLSVA---GMSRVKRREISDHYLSLVGLTDFADAL-----PKALSGGMKQRCAIARAYAAAPEILLMDEPFGALDALTRVHMQDQLLDAWSRER----RTVMFITHDVDEAVY 197          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y3647_BRUA2 (Putative ATP-binding protein BAB2_1147 OS=Brucella abortus (strain 2308) GN=BAB2_1147 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 50/183 (27.32%), Postives = 87/183 (47.54%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVF 785
            GE + ++GPSGCGKST ++  AG L  +    GEIL+  +           + Q  AL   LTV + V +   +     M++++++E ++  +  +GL D  +        K LSGG K+R +I       P++L +DEP   LD+    ++  ++     R+     RT++   H     V+
Sbjct:   30 GEFVTVVGPSGCGKSTAMNIAAGLLQPS---GGEILVGDKPVTGPGPERGVIFQQYALFPWLTVRQNVEFGLSVA---GMSRVKRREISDHYLSLVGLTDFADAL-----PKALSGGMKQRCAIARAYAAAPEILLMDEPFGALDALTRVHMQDQLLDAWSRER----RTVMFITHDVDEAVY 197          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y2324_STRCO (Putative ABC transporter ATP-binding protein SCO2324 OS=Streptomyces coelicolor GN=SCO2324 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 63/183 (34.43%), Postives = 88/183 (48.09%), Query Frame = 3
Query:  237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQA--GEILINGRK------RALAYGTSAYVTQDDA--LITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIA 755
            GEL+ + GPSG GKST+L A+ G +   T     G + + GR       R LA      V QD     +T     E  Y    L LP  + +     R E T+  +GL D  +  I       LSGGQ++RV+I   +   P +L LDEPTS LD AA+  V   +A L +  H +G+  ++A
Sbjct:   29 GELVLLAGPSGVGKSTVLGAVGGLVPHFTGGTLRGRVTVAGRDTRTHKPRELA-DVVGTVGQDPLSHFVTDTVEDELAYGMESLGLPPDVMR----RRVEETLDLLGLSDLRSRPIAT-----LSGGQQQRVAIGSVLTPHPDVLVLDEPTSALDPAAAEEV---LAVLQRLVHDLGTTVLMA 198          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y149_LACPL (Putative ABC transporter ATP-binding protein lp_0149 OS=Lactobacillus plantarum GN=lp_0149 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 54/186 (29.03%), Postives = 94/186 (50.54%), Query Frame = 3
Query:  198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQD-DALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH 728
            + I+  +T     GE+++++G +G GKSTL + + G L     Q+G++  NG        ++RA   G   Y+ QD + +I+T  + + V     L+    +   + K R +  +K  GL +  +     W    LS GQK+RV+I   ++  P +L LDEPT+G D      +M+ + K++Q  H
Sbjct:  315 KPIINDITVTLHQGEMISLVGQNGTGKSTLSNLITGFL---MPQSGKMRFNGHSLADQSVKERADQIG---YILQDPNQMISTTMIFDEVAAGLVLR---GVADDEVKRRVQAVLKVCGLYEFRH-----WPISALSFGQKKRVTIAAILVLEPAMLILDEPTAGQDLQHYTEMMTFLTKINQEQH 486          

HSP 2 Score: 68.9366 bits (167), Expect = 3.550e-11
Identity = 53/173 (30.64%), Postives = 82/173 (47.40%), Query Frame = 3
Query:  234 PGELLAIMGPSGCGKSTLLDALAGRLGSN--------TRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH 728
            PGE + I GPSG GKSTL   L G +  +         R AG+ +      AL+      +   D+    LTV E + +S +    D  T+   ++  E   + + LQD +  R      + LSGGQK+RV++   ++   K+L  DEP + LD A+     + +A +DQ  H
Sbjct:   32 PGEKVLIAGPSGSGKSTLGRCLNGLIPQSYPGTVTGQARIAGQTITESSIFALSQDVGTVLQDPDSQFVGLTVVEDMAFSLE---NDQQTQPAMRQATEQWAQTLDLQDLLTHR-----PQELSGGQKQRVAMAGVLIDNSKILLFDEPLASLDPASG---KASMALIDQLTH 193          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y1073_RICCN (Putative export ATP-binding/permease protein RC1073 OS=Rickettsia conorii GN=RC1073 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 66/253 (26.09%), Postives = 119/253 (47.04%), Query Frame = 3
Query:   33 IPVPAISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS-----AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776
            +PV A+ R   +++ +       H+  +  ++ D + + ++++  T      + N  I+  ++      + L I+G SG GKST++  L   L    ++ G ILIN +   L          AYV Q+ A I + T+   + +       D + ++ K    E    +  L D +N +IG  G + LSGGQK+R++I   +L  P++L LDE  S LD+ +   ++  I K+      +    II+  H+ SS
Sbjct:  303 LPVTALERIITIIDKTP----IAHNNYLELNNSDPISIEFKNVDFTY---HSRPNLRIINNMSLKINANKFLGIVGRSGAGKSTVIQLL---LRFYRQENGTILINNQDITLLNPAEIRKLIAYVPQE-ASIFSGTIKSNIIFGNNEASDDEINEIIKITGIEEFAAK--LHDGINAKIGERGVR-LSGGQKQRIAIARALLRMPQILLLDEAMSALDTMSEQKLLESIKKI------MRGNIIISIAHRISS 535          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_SHIF8 (Aliphatic sulfonates import ATP-binding protein ssuB OS=Shigella flexneri serotype 5b (strain 8401) GN=ssuB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 62/193 (32.12%), Postives = 91/193 (47.15%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782
            +L  L  +   G+ +A++G SG GKSTLL  LAG     T  AG++L      A     +  + QD  L+   +V + V             K Q ++ A   +  +GL++    R G W A  LSGGQK+RV++   ++ RP LL LDEP   LD+     +   I  L Q+ HG    T++   H  S  V
Sbjct:   26 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLHLLAGL---ETPTAGDVLAGTTPLAEIQDDTRMMFQDARLLPWKSVIDNVGLGL---------KGQWRDAARRALAAVGLEN----RAGEWPA-ALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQQ-HGF---TVLLVTHDVSEAV 197          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_RHOPA (Aliphatic sulfonates import ATP-binding protein ssuB OS=Rhodopseudomonas palustris GN=ssuB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 53/161 (32.92%), Postives = 82/161 (50.93%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674
            G+  +L+G+  +   G+ + I+G SGCGKSTLL  +A   G  T  AG I+    K     G    + Q+  L+    V   V    ++ L         + RA+  + E+GL D    + G W A  LSGGQK+RV++   +++RP++L  DEP   LD+
Sbjct:   50 GDNDVLRGIDLHIPAGQFVTIVGRSGCGKSTLLRLIA---GLETPTAGHIVFGEDKLP---GDVRVMFQEPRLLPWARVLANV----EVGLGTERNSPDARARADAALIEVGLDD----KRGEWPAV-LSGGQKQRVALARALVSRPRVLAFDEPLGALDA 195          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_ERWCT (Aliphatic sulfonates import ATP-binding protein ssuB OS=Erwinia carotovora subsp. atroseptica GN=ssuB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 59/197 (29.95%), Postives = 94/197 (47.72%), Query Frame = 3
Query:  192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782
            G+R++L  +      G+ +AI+G SGCGKSTLL  LAG   +++   GE+L      + A   +  + Q+  L+    V + V    +            +E+A+  +  +GL D  N     W A  LSGGQK+RV++   ++  P+LL LDEP   LD+     + S I  +    HG    T++   H  S  +
Sbjct:   33 GHRTVLNDVQLRIPSGQFVAIVGRSGCGKSTLLRLLAGLEAASS---GELLTGTAPLSSAKDDTRLMFQEARLLPWKKVIDNVGLGLRGNW---------REKAQDALTSVGLADRAND----WPA-ALSGGQKQRVALARALIHHPRLLLLDEPLGALDALTRIEMQSLIENI-WLQHGF---TVLLVTHDVSEAI 208          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FBPC1_RHOSR7.154e-1231.58Fe(3+) ions import ATP-binding protein fbpC 1 OS=R... [more]
CYSA_SYNE77.154e-1231.14Sulfate/thiosulfate import ATP-binding protein cys... [more]
Y4187_BRUSU9.343e-1227.32Putative ATP-binding protein BRA1187 OS=Brucella s... [more]
Y3647_BRUA29.343e-1227.32Putative ATP-binding protein BAB2_1147 OS=Brucella... [more]
Y2324_STRCO9.343e-1234.43Putative ABC transporter ATP-binding protein SCO23... [more]
Y149_LACPL9.343e-1229.03Putative ABC transporter ATP-binding protein lp_01... [more]
Y1073_RICCN9.343e-1226.09Putative export ATP-binding/permease protein RC107... [more]
SSUB_SHIF89.343e-1232.12Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB_RHOPA9.343e-1232.92Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB_ERWCT9.343e-1229.95Aliphatic sulfonates import ATP-binding protein ss... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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