CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FBPC1_RHOSR (Fe(3+) ions import ATP-binding protein fbpC 1 OS=Rhodococcus sp. (strain RHA1) GN=fbpC1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12 Identity = 54/171 (31.58%), Postives = 78/171 (45.61%), Query Frame = 3 Query: 177 DGQKK--GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAG---RLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674 DG K G +IL+G+ G AI+GPSGCGK+TLL +AG AG ++ G + YV QD AL TV V + L ++ R I E+ +++ LSGGQ++RV++ + P+L+ LDEP S LD+ Sbjct: 8 DGVDKSFGGATILRGVAFAVESGSTTAIVGPSGCGKTTLLRLIAGFEKPDAGTIALAGRVVAGGGWAPAHRRSVGYVAQDGALFPHATVGANVGFG-----------LPRRARTPARIAELLEMVSLDPSYAARRPDQLSGGQQQRVALARALAREPELMLLDEPFSALDA 167
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA_SYNE7 (Sulfate/thiosulfate import ATP-binding protein cysA OS=Synechococcus elongatus (strain PCC 7942) GN=cysA PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12 Identity = 52/167 (31.14%), Postives = 83/167 (49.70%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH 728 G L+A++GPSG GKSTLL +AG +G I + GR ++ +V Q AL LTV + + + +L + KE+ ++E+ L+ T +G LSGGQ++RV++ + +P++L LDEP LD+ + S + KL H Sbjct: 34 GSLVALLGPSGSGKSTLLRLIAGL---EQPDSGRIFLTGRDATNESVRDRQIGFVFQHYALFKHLTVRKNIAFGLEL-------RKHTKEKVRARVEEL-LELVQLTGLGDRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKDLRSWLRKLHDEVH 189
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y4187_BRUSU (Putative ATP-binding protein BRA1187 OS=Brucella suis GN=BRA1187 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 50/183 (27.32%), Postives = 87/183 (47.54%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVF 785 GE + ++GPSGCGKST ++ AG L + GEIL+ + + Q AL LTV + V + + M++++++E ++ + +GL D + K LSGG K+R +I P++L +DEP LD+ ++ ++ R+ RT++ H V+ Sbjct: 30 GEFVTVVGPSGCGKSTAMNIAAGLLQPS---GGEILVGDKPVTGPGPERGVIFQQYALFPWLTVRQNVEFGLSVA---GMSRVKRREISDHYLSLVGLTDFADAL-----PKALSGGMKQRCAIARAYAAAPEILLMDEPFGALDALTRVHMQDQLLDAWSRER----RTVMFITHDVDEAVY 197
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y3647_BRUA2 (Putative ATP-binding protein BAB2_1147 OS=Brucella abortus (strain 2308) GN=BAB2_1147 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 50/183 (27.32%), Postives = 87/183 (47.54%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVF 785 GE + ++GPSGCGKST ++ AG L + GEIL+ + + Q AL LTV + V + + M++++++E ++ + +GL D + K LSGG K+R +I P++L +DEP LD+ ++ ++ R+ RT++ H V+ Sbjct: 30 GEFVTVVGPSGCGKSTAMNIAAGLLQPS---GGEILVGDKPVTGPGPERGVIFQQYALFPWLTVRQNVEFGLSVA---GMSRVKRREISDHYLSLVGLTDFADAL-----PKALSGGMKQRCAIARAYAAAPEILLMDEPFGALDALTRVHMQDQLLDAWSRER----RTVMFITHDVDEAVY 197
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y2324_STRCO (Putative ABC transporter ATP-binding protein SCO2324 OS=Streptomyces coelicolor GN=SCO2324 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 63/183 (34.43%), Postives = 88/183 (48.09%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQA--GEILINGRK------RALAYGTSAYVTQDDA--LITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIA 755 GEL+ + GPSG GKST+L A+ G + T G + + GR R LA V QD +T E Y L LP + + R E T+ +GL D + I LSGGQ++RV+I + P +L LDEPTS LD AA+ V +A L + H +G+ ++A Sbjct: 29 GELVLLAGPSGVGKSTVLGAVGGLVPHFTGGTLRGRVTVAGRDTRTHKPRELA-DVVGTVGQDPLSHFVTDTVEDELAYGMESLGLPPDVMR----RRVEETLDLLGLSDLRSRPIAT-----LSGGQQQRVAIGSVLTPHPDVLVLDEPTSALDPAAAEEV---LAVLQRLVHDLGTTVLMA 198
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y149_LACPL (Putative ABC transporter ATP-binding protein lp_0149 OS=Lactobacillus plantarum GN=lp_0149 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 54/186 (29.03%), Postives = 94/186 (50.54%), Query Frame = 3 Query: 198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQD-DALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH 728 + I+ +T GE+++++G +G GKSTL + + G L Q+G++ NG ++RA G Y+ QD + +I+T + + V L+ + + K R + +K GL + + W LS GQK+RV+I ++ P +L LDEPT+G D +M+ + K++Q H Sbjct: 315 KPIINDITVTLHQGEMISLVGQNGTGKSTLSNLITGFL---MPQSGKMRFNGHSLADQSVKERADQIG---YILQDPNQMISTTMIFDEVAAGLVLR---GVADDEVKRRVQAVLKVCGLYEFRH-----WPISALSFGQKKRVTIAAILVLEPAMLILDEPTAGQDLQHYTEMMTFLTKINQEQH 486 HSP 2 Score: 68.9366 bits (167), Expect = 3.550e-11 Identity = 53/173 (30.64%), Postives = 82/173 (47.40%), Query Frame = 3 Query: 234 PGELLAIMGPSGCGKSTLLDALAGRLGSN--------TRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH 728 PGE + I GPSG GKSTL L G + + R AG+ + AL+ + D+ LTV E + +S + D T+ ++ E + + LQD + R + LSGGQK+RV++ ++ K+L DEP + LD A+ + +A +DQ H Sbjct: 32 PGEKVLIAGPSGSGKSTLGRCLNGLIPQSYPGTVTGQARIAGQTITESSIFALSQDVGTVLQDPDSQFVGLTVVEDMAFSLE---NDQQTQPAMRQATEQWAQTLDLQDLLTHR-----PQELSGGQKQRVAMAGVLIDNSKILLFDEPLASLDPASG---KASMALIDQLTH 193
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y1073_RICCN (Putative export ATP-binding/permease protein RC1073 OS=Rickettsia conorii GN=RC1073 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 66/253 (26.09%), Postives = 119/253 (47.04%), Query Frame = 3 Query: 33 IPVPAISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS-----AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 +PV A+ R +++ + H+ + ++ D + + ++++ T + N I+ ++ + L I+G SG GKST++ L L ++ G ILIN + L AYV Q+ A I + T+ + + D + ++ K E + L D +N +IG G + LSGGQK+R++I +L P++L LDE S LD+ + ++ I K+ + II+ H+ SS Sbjct: 303 LPVTALERIITIIDKTP----IAHNNYLELNNSDPISIEFKNVDFTY---HSRPNLRIINNMSLKINANKFLGIVGRSGAGKSTVIQLL---LRFYRQENGTILINNQDITLLNPAEIRKLIAYVPQE-ASIFSGTIKSNIIFGNNEASDDEINEIIKITGIEEFAAK--LHDGINAKIGERGVR-LSGGQKQRIAIARALLRMPQILLLDEAMSALDTMSEQKLLESIKKI------MRGNIIISIAHRISS 535
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_SHIF8 (Aliphatic sulfonates import ATP-binding protein ssuB OS=Shigella flexneri serotype 5b (strain 8401) GN=ssuB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 62/193 (32.12%), Postives = 91/193 (47.15%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782 +L L + G+ +A++G SG GKSTLL LAG T AG++L A + + QD L+ +V + V K Q ++ A + +GL++ R G W A LSGGQK+RV++ ++ RP LL LDEP LD+ + I L Q+ HG T++ H S V Sbjct: 26 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLHLLAGL---ETPTAGDVLAGTTPLAEIQDDTRMMFQDARLLPWKSVIDNVGLGL---------KGQWRDAARRALAAVGLEN----RAGEWPA-ALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQQ-HGF---TVLLVTHDVSEAV 197
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_RHOPA (Aliphatic sulfonates import ATP-binding protein ssuB OS=Rhodopseudomonas palustris GN=ssuB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 53/161 (32.92%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDS 674 G+ +L+G+ + G+ + I+G SGCGKSTLL +A G T AG I+ K G + Q+ L+ V V ++ L + RA+ + E+GL D + G W A LSGGQK+RV++ +++RP++L DEP LD+ Sbjct: 50 GDNDVLRGIDLHIPAGQFVTIVGRSGCGKSTLLRLIA---GLETPTAGHIVFGEDKLP---GDVRVMFQEPRLLPWARVLANV----EVGLGTERNSPDARARADAALIEVGLDD----KRGEWPAV-LSGGQKQRVALARALVSRPRVLAFDEPLGALDA 195
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_ERWCT (Aliphatic sulfonates import ATP-binding protein ssuB OS=Erwinia carotovora subsp. atroseptica GN=ssuB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 59/197 (29.95%), Postives = 94/197 (47.72%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782 G+R++L + G+ +AI+G SGCGKSTLL LAG +++ GE+L + A + + Q+ L+ V + V + +E+A+ + +GL D N W A LSGGQK+RV++ ++ P+LL LDEP LD+ + S I + HG T++ H S + Sbjct: 33 GHRTVLNDVQLRIPSGQFVAIVGRSGCGKSTLLRLLAGLEAASS---GELLTGTAPLSSAKDDTRLMFQEARLLPWKKVIDNVGLGLRGNW---------REKAQDALTSVGLADRAND----WPA-ALSGGQKQRVALARALIHHPRLLLLDEPLGALDALTRIEMQSLIENI-WLQHGF---TVLLVTHDVSEAI 208 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |