CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB1_BURXL (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Burkholderia xenovorans (strain LB400) GN=ssuB1 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 59/198 (29.80%), Postives = 95/198 (47.98%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQK--KERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 G++ G R +L G G +AI+G SGCGKSTLL +AG +A ++ R + + QD L+ +V L + M L + +E A + E+GL + R W A+ LSGGQ++RV++ ++ RP+LL LDEP LD+ + + I +L R+H + + +H+ Sbjct: 86 GKRYGEREVLSGFDLSIERGSFVAIVGRSGCGKSTLLRLVAG-----LEKATSGVLEKRNEEGGPLDTRIMFQDARLLPWKSV-----------LQNVMLGLGRSAREDARAVLAEVGLLE----RANDWPAQ-LSGGQRQRVALARALVHRPQLLLLDEPLGALDALTRIEMHALIERL-WREHRFTALLVTHDVHE 261
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: RBSA_YERPS (Ribose import ATP-binding protein rbsA OS=Yersinia pseudotuberculosis GN=rbsA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 60/207 (28.99%), Postives = 102/207 (49.28%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR-------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 G L+G+ GE+ A+MG +G GKSTL+ LA G+ T +GEILI GR K AL G S + Q+ L LTV+E ++ ++L + + + + + I +G Q + + GL+ ++++V I + ++L +DEPT+ L + ++ + I +L RD G+ I I +EV++L Sbjct: 17 GKFQALKGVDLTVFSGEIHALMGENGAGKSTLMKILA---GAYTTTSGEILIEGRPWSIKGPKDALNAGIS-LIYQEMQLAPNLTVAENIFLGSELSRGGLVQRKEMVMQTQAVIDRLGAQFKASDLV-----MGLTIAEQQQVEIARALHRNSRILVMDEPTAALSTRETHRLFELILRL--RDEGMA----IIYISHRMAEVYEL 208
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: RBSA_YERPN (Ribose import ATP-binding protein rbsA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rbsA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 60/207 (28.99%), Postives = 102/207 (49.28%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR-------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 G L+G+ GE+ A+MG +G GKSTL+ LA G+ T +GEILI GR K AL G S + Q+ L LTV+E ++ ++L + + + + + I +G Q + + GL+ ++++V I + ++L +DEPT+ L + ++ + I +L RD G+ I I +EV++L Sbjct: 17 GKFQALKGVDLTVFSGEIHALMGENGAGKSTLMKILA---GAYTTTSGEILIEGRPWSIKGPKDALNAGIS-LIYQEMQLAPNLTVAENIFLGSELSRGGLVQRKEMVMQTQAVIDRLGAQFKASDLV-----MGLTIAEQQQVEIARALHRNSRILVMDEPTAALSTRETHRLFELILRL--RDEGMA----IIYISHRMAEVYEL 208
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: RBSA_YERPE (Ribose import ATP-binding protein rbsA OS=Yersinia pestis GN=rbsA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 60/207 (28.99%), Postives = 102/207 (49.28%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR-------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 G L+G+ GE+ A+MG +G GKSTL+ LA G+ T +GEILI GR K AL G S + Q+ L LTV+E ++ ++L + + + + + I +G Q + + GL+ ++++V I + ++L +DEPT+ L + ++ + I +L RD G+ I I +EV++L Sbjct: 17 GKFQALKGVDLTVFSGEIHALMGENGAGKSTLMKILA---GAYTTTSGEILIEGRPWSIKGPKDALNAGIS-LIYQEMQLAPNLTVAENIFLGSELSRGGLVQRKEMVMQTQAVIDRLGAQFKASDLV-----MGLTIAEQQQVEIARALHRNSRILVMDEPTAALSTRETHRLFELILRL--RDEGMA----IIYISHRMAEVYEL 208
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: RBSA_YERPA (Ribose import ATP-binding protein rbsA OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=rbsA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 60/207 (28.99%), Postives = 102/207 (49.28%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR-------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 G L+G+ GE+ A+MG +G GKSTL+ LA G+ T +GEILI GR K AL G S + Q+ L LTV+E ++ ++L + + + + + I +G Q + + GL+ ++++V I + ++L +DEPT+ L + ++ + I +L RD G+ I I +EV++L Sbjct: 17 GKFQALKGVDLTVFSGEIHALMGENGAGKSTLMKILA---GAYTTTSGEILIEGRPWSIKGPKDALNAGIS-LIYQEMQLAPNLTVAENIFLGSELSRGGLVQRKEMVMQTQAVIDRLGAQFKASDLV-----MGLTIAEQQQVEIARALHRNSRILVMDEPTAALSTRETHRLFELILRL--RDEGMA----IIYISHRMAEVYEL 208
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PSTB_DEIRA (Phosphate import ATP-binding protein pstB OS=Deinococcus radiodurans GN=pstB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 55/176 (31.25%), Postives = 87/176 (49.43%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGR--LGSNTRQAGEILINGRKRALAYGTSA----------YVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAAS 683 G++ ++ + RPG + A +GPSGCGK+T L A+ L R G IL++G+ Y S V Q T++V + V A L+L + + AE +++ L D + R+ A GLSGGQ++R+ I + P++L +DEPTS LD A++ Sbjct: 17 GDKQAVKNVNLDVRPGTVNAFIGPSGCGKTTFLRAINRMHDLTPGARVTGSILLDGQD---IYSPSVDPVAMRRRVGMVFQKPNPFPTMSVFDNVV--AGLKLTGVKNRDHLMQVAERSLRGAALWDEVKDRLNT-PATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPAST 186
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PSTB_COLP3 (Phosphate import ATP-binding protein pstB OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=pstB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 54/185 (29.19%), Postives = 92/185 (49.73%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDAL--AGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTL------TVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 722 G + L +T G++ A +GPSGCGKSTLL ++ L N +GEI ++G + A + + ++ T+ E V Y ++ + +L E AE +++ L + + R+ A GLSGGQ++R+ I + +P++L LDEPTS LD ++ + I L ++ Sbjct: 43 GKKQALNNITMSIPKGQVTAFIGPSGCGKSTLLRSINRMNDLVDNCHISGEINLHGSNIYDKHVDVAELRRKVGMVFQRPNPFPKTIYENVVYGLRIMGENNRRRLD--EAAEQSLRSAALWNEVKDRLHE-SALGLSGGQQQRLVIARAIAIQPEVLLLDEPTSALDPISTLTIEELINDLKKQ 224
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: POTA_MESFL (Spermidine/putrescine import ATP-binding protein potA OS=Mesoplasma florum GN=potA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 54/180 (30.00%), Postives = 95/180 (52.78%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA-LAYGTSAYVT--QDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734 +L+G+ + GE + ++GPSGCGK+T L +AG N+ G+I+ G+ + + T Q AL L V + + + L+ T + ++E + I+++GL+ + I LSGGQK+RV+I ++ +PK+L LDEP + LD ++ + +L QR+ G+ Sbjct: 20 VLKGIDLNIKEGEFITLLGPSGCGKTTTLRIVAGFEKPNS---GQIMFEGKDLLPIPINKRQFNTIFQSYALFPHLNVFDNIAFG--LRTKKTKKDILQREVLKQ-IRQVGLEGFEDRNIND-----LSGGQKQRVAIARALVMKPKVLLLDEPLAALDVQLRQHMREELKRL-QREIGI 187
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_LACGA (Phosphonates import ATP-binding protein phnC OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=phnC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 56/190 (29.47%), Postives = 97/190 (51.05%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT--------------SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 GE + ++G SG GKSTLL ++ RL ++ G+ILI+G+ A G S + + +++ + YY + TK + K++A ++ + L D + TR A LSGGQ++RV+I + PK++ DEPT+ LD S VM + L++ ++G+ T++A++H Sbjct: 35 GEFVVVVGLSGAGKSTLLRSI-NRLQDVSK--GDILIDGKSITSAKGKDLREIRRDIGMIFQSFNLVKRSSVLRNVLTGRVAYYPTWKTTFNLFTK-EDKQKAYEALQRVDLADKVYTR-----ADQLSGGQQQRVAIARVLTQNPKIILADEPTASLDPQTSRRVMHDLKMLNE-EYGM---TVVANLH 211
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: PHNC_BURMA (Phosphonates import ATP-binding protein phnC OS=Burkholderia mallei GN=phnC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 59/212 (27.83%), Postives = 96/212 (45.28%), Query Frame = 3 Query: 168 TVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQA------------GEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQ 767 T P+G+K L+ + PGE++A++G SG GKSTLL +A S+ R + G I + R+ G +V Q L+ L+V V A ++P + RA+ + L + A LSGGQ++R ++ ++ R +++ DEP + LD AAS VM + L+ T++ S+HQ Sbjct: 12 TFPNGRKG-----LEDIDLAIAPGEMVALIGASGSGKSTLLRQIASFSSSDARPSRIDIFGRSIQRDGRIARDVRRMRRDIG---FVFQQFNLVNRLSVETNVLIGALARVPMWRRLAGRFSRADRALAAQALGEVGIAEHARERAANLSGGQQQRAALARALVQRARIILADEPIASLDPAASRRVMEMLRALNANHR----LTVLVSLHQ 211 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |