CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: NODI1_RHIME (Nod factor export ATP-binding protein I OS=Rhizobium meliloti GN=nodI PE=3 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 58/196 (29.59%), Postives = 93/196 (47.45%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING----RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMG-LQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 G++ ++ GL+ GE ++GP+G GKST+ + LG T GEI + G + LA V Q D L TV E + + T ++ E ++ E L++ + R+ LSGG KRR+++ ++ P+LL LDEPT+GLD A + + R+ L R +TI+ + H Sbjct: 47 GDKPVINGLSFTVAAGECFGLLGPNGAGKSTITRMI---LGMTTPGTGEITVLGVPVPSRARLARMRIGVVPQFDNLDLEFTVRENLLVFGRYFRMST----REIEAVIPSLLEFARLENKADARVSD-----LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAR-----GKTILLTTH 225
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MRP4_HUMAN (Multidrug resistance-associated protein 4 OS=Homo sapiens GN=ABCC4 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 59/176 (33.52%), Postives = 83/176 (47.16%), Query Frame = 3 Query: 186 KKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMG-------LQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYV 692 K LQGL+ RPGELLA++GP G GKS+LL A+ G L + G + ++GR AYV+Q + +S L+ K +KER E IK L+D T IG G LSGGQK RV++ + + LD+P S +D+ S ++ Sbjct: 421 KASETPTLQGLSFTVRPGELLAVVGPVGAGKSSLLSAVLGELAPS---HGLVSVHGR--------IAYVSQ-----------QPWVFSGTLRSNILFGKKYEKERYEKVIKACALKKDLQLLEDGDLTVIGDRGTT-LSGGQKARVNLARAVYQDADIYLLDDPLSAVDAEVSRHL 573
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_PASMU (Macrolide export ATP-binding/permease protein macB OS=Pasteurella multocida GN=macB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 60/190 (31.58%), Postives = 96/190 (50.53%), Query Frame = 3 Query: 201 SILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK------------RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 734 ++L+ + GE++AI+G SG GKSTL++ L G L + GE L GR+ R +G +V Q L+ LT E V A + M K ++ ERA+ + +GL++ + + LSGGQ++RVSI ++ +++ DEPT LDS +S V+S + L+ + H V Sbjct: 24 TVLKSINLKIYAGEMVAIVGASGSGKSTLMNLL-GVL--DQADDGEYLFRGRQISTLSSDELADLRCYHFG---FVFQRYHLLPHLTAVENVEIPA---IYSAMEKEKRIERAQKLLCRLGLENQLKHK-----PSQLSGGQQQRVSIARALMNGGEIILADEPTGALDSQSSQEVLSVLKTLNHQGHTV 199
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LOLD_SILPO (Lipoprotein-releasing system ATP-binding protein lolD OS=Silicibacter pomeroyi GN=lolD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 58/198 (29.29%), Postives = 94/198 (47.47%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---------KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIAS 758 G +L+G+ PGE++A++ PSG GKSTLL ++G L + AG + I G+ + + +V Q L+ T E V QL + + + + + RA + +G++ R LSGG+++RV+ C + P+LL DEPT LD A S V + +L + G G +IA+ Sbjct: 21 GEVRVLRGVDLSVEPGEMVALVAPSGAGKSTLLH-ISGLL--DVPDAGRVEIAGQDMTGRGDRARTGVRRRDVGFVYQFHHLLPEFTALENVVLP---QLANGIGEGEARARARALLSRVGVEGRAGHR-----PAALSGGEQQRVAFCRALANAPRLLLADEPTGNLDPATSDQVFDALVELVR---GTGLSALIAT 204
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LACK_RHIRD (Lactose transport ATP-binding protein lacK OS=Rhizobium radiobacter GN=lacK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 56/182 (30.77%), Postives = 88/182 (48.35%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 G+ +++G+ GE + +GPSGCGKSTLL +A G +GE+ I G KR + A V Q AL +TV E + ++ + M K + + R K + L M+ + K LSGGQ++RV+I ++ +P + DEP S LD+ ++ IA+L Sbjct: 14 GSLEVIKGVNLEVSSGEFVVFVGPSGCGKSTLLRMIA---GLEDISSGELTIGGTVMNDVDPSKRGI-----AMVFQTYALYPHMTVRENMGFALRFA---GMAKDEIERRVNAAAKILELDALMDRK-----PKALSGGQRQRVAIGRAIVRQPDVFLFDEPLSNLDAELRVHMRVEIARL 179
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HLYB_ECO57 (Alpha-hemolysin translocation ATP-binding protein hlyB OS=Escherichia coli O157:H7 GN=hlyB PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 57/196 (29.08%), Postives = 97/196 (49.49%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALA-----YGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 IL + Y G+++ I+G SG GKSTL L T G+ILI+G +LA V Q++ L+ + S + + + + + A I+E L++ NT +G G GLSGGQ++R++I ++T P++L DE TS LD + +M ++++ + +RT+I H+ S+ Sbjct: 484 ILNNINLYISKGDVIGIVGRSGSGKSTLTKLLQRFYIPET---GQILIDGHDLSLADPEWLRRQIGVVLQENILLNRSIIDNITLASPAVSMEQAI-EAARLAGAHDFIRE--LKEGYNTIVGEQGV-GLSGGQRQRIAIARALVTNPRILIFDEATSALDYESENIIMKNMSRICK------NRTVIIIAHRLST 666
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HEPA_ANASP (Heterocyst differentiation ATP-binding protein hepA OS=Anabaena sp. (strain PCC 7120) GN=hepA PE=2 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 62/196 (31.63%), Postives = 99/196 (50.51%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS-----AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 +L +T G+ A++G SG GK+TL D L R T G+IL++G S A V+QD + T ++ + + Y + ++ + A I+EM + +T++G G + LSGGQ++R++I +L P++L LDE TS LDS + + I KL VG RT+IA H+ S+ Sbjct: 379 VLNNITLTIERGKTTALVGASGAGKTTLAD-LIPRFYDPTE--GQILVDGLDVQYFEINSLRRKMAVVSQDTFIFNT-SIRDNIAYGTSGASEAEIREVARLANALQFIEEM--PEGFDTKLGDRGVR-LSGGQRQRIAIARALLRDPEILILDEATSALDSVSERLIQESIEKL-----SVG-RTVIAIAHRLST 561
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CYSA1_CHRVO (Sulfate/thiosulfate import ATP-binding protein cysA 1 OS=Chromobacterium violaceum GN=cysA1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 51/171 (29.82%), Postives = 85/171 (49.71%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGA----KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDH 728 GEL+A++GPSGCGK+TLL +A G AG +L++G+ + + +V Q AL +TV + V + +++ + ++ AE+ K L D + W A LSGGQ++R+++ + P++L LDEP LD+ + + KL H Sbjct: 28 GELVALLGPSGCGKTTLLRIIA---GLEQADAGRVLLDGQDASATHVRERQVGFVFQHYALFRHMTVFDNVAFGLRMK-----PRRERPSEAEIARKVHALLDLVQL---DWLADRLPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRKLHDELH 187
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCB9_RAT (ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus GN=Abcb9 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 51/172 (29.65%), Postives = 88/172 (51.16%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK-----RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRI 704 +LQ ++ PG++ A++GPSG GKS+ ++ L Q G +L++G + + V+Q+ L ++++ + Y + + + +K A I E LQD +T G GA+ LSGGQK+RV++ ++ P +L LDE TS LD+ + Y + I Sbjct: 517 VLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFY---PLQGGRVLLDGEPIGAYDHKYLHRVISLVSQEPVLFAR-SITDNISYGLPTVPFEMVVEAAQKANAHGFIME--LQDGYSTETGEKGAQ-LSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAI 681
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB1A_ARATH (ABC transporter A family member 1 OS=Arabidopsis thaliana GN=ABCA1 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 57/217 (26.27%), Postives = 97/217 (44.70%), Query Frame = 3 Query: 132 DGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS----AYVTQDDALITTLTVSEAVYYSAQLQ--LPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 D L Q+L P + G + +Q LT + GE +G +G GK+T L L+G T +G I G+ + Y Q DAL LTV E + A+++ + + + ++ E + + + + LSGG KR++S+ I M+ P ++ LDEP++G+D A ++ I++L R G +I + H Sbjct: 1449 DNTMLYLQNLRKVYPGDKHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGE---ETPTSGTAFIFGKDIVASPKAIRQHIGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVTEKLVEFDLLKHSHKPSFT----------LSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDVISRLSTRS---GKTAVILTTH 1649 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |