CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB10B_ARATH (ABC transporter B family member 10 OS=Arabidopsis thaliana GN=ABCB10 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12 Identity = 69/244 (28.28%), Postives = 115/244 (47.13%), Query Frame = 3 Query: 60 FEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING---RKRALAY--GTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSS 776 F+++E ++ +KT NVN D + ++D+ T P + + I L G+++A++G SG GKST++ +L R T G ++++G R L + G V Q+ L T T+ E + Y + +T K A I L + T++G G + LSGGQK+R+SI ++ P +L LDE TS LD+ + V + D + RT + H+ S+ Sbjct: 339 FQMIERNTEDKTGRKLGNVNGD------ILFKDVTFTYPS---RPDVVIFDKLNFVIPAGKVVALVGGSGSGKSTMI-SLIERFYEPTD--GAVMLDGNDIRYLDLKWLRGHIGLVNQEPVLFAT-TIRENIMYGKDDATSEEITNAAKLSEAISFINN--LPEGFETQVGERGIQ-LSGGQKQRISISRAIVKNPSILLLDEATSALDAESEKIVQEAL------DRVMVGRTTVVVAHRLST 560
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ZNUC_YERE8 (Zinc import ATP-binding protein znuC OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=znuC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 58/193 (30.05%), Postives = 93/193 (48.19%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTL--TVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 G+R +L ++ RPG +L ++GP+G GKSTL+ + G + + G I+ R+ L G YV Q L TTL TVS + ++ D + L++ A + + M + LSGG+ +RV + +L RP+LL LDEPT G+D + I +L +R+ G + +H Sbjct: 15 GSRRVLNDISLSLRPGRILTLLGPNGAGKSTLVRVVLGLIAPTS---GSII---REPGLRIG---YVPQKLHLDTTLPLTVSRFMRLKPGVRKADILPALKRVHAAHLLDQPM---------------QKLSGGENQRVLLARALLNRPQLLVLDEPTQGVDVNGQLALYDLIEQL-RRELGCAVLMVSHDLH 182
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YVCR_BACSU (Uncharacterized ABC transporter ATP-binding protein yvcR OS=Bacillus subtilis GN=yvcR PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 63/198 (31.82%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTR-IGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVF 785 GE + IMGPSG GK+TLL+ LA + T+ GE++ING R+R L + V QD L+ TLT+ E + LP + K++ +E E + E L D + + I +SGGQ++R + ++ P L+ DEPT LDS ++ VM+ +A+L++ TI+ H ++ F Sbjct: 35 GEFVGIMGPSGSGKTTLLNLLA-TIDKPTQ--GEMMINGIQPKTLKDQELALFRRRELGF-----VFQDFNLLDTLTIRENIL------LPLALDKVKLREM-EARLDE--LADTLQIKHILDHRTYEVSGGQQQRAACARAIIHNPALILADEPTGNLDSKSAKQVMNTLAQLNEEKEA----TILLVTHDATAASF 211
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YNJD_ECOLI (Uncharacterized ABC transporter ATP-binding protein ynjD OS=Escherichia coli (strain K12) GN=ynjD PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 48/150 (32.00%), Postives = 74/150 (49.33%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRAL---AYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSA 677 G+++ +MGPSGCGKSTL + G L GE+ +N ++ + A + QD L +V + + L LP T+ ++ ++ GL+ A + LSGGQ+ RV++ +L +PK L LDEP S LD A Sbjct: 27 GDIVTLMGPSGCGKSTLFSWMIGALAEQFSCTGELWLNEQRIDILPTAQRQIGILFQDALLFDQFSVGQ----NLLLALPATLKGNARRNAVNDALERSGLEGAFHQ-----DPATLSGGQRARVALLRALLAQPKALLLDEPFSRLDVA 167
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: YGAD_BACSU (Putative multidrug export ATP-binding/permease protein ygaD OS=Bacillus subtilis GN=ygaD PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 65/227 (28.63%), Postives = 101/227 (44.49%), Query Frame = 3 Query: 39 VPAISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTK--LQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 + ++ R FE ++ ++I ++ G F V +K +IL ++ GE +A++G SG GKSTL+ +L R T +G +LI+G S L T SE + + + PD + ++ + A M + TR+G G K LSGGQK+R+SI L P LL LDE TS LD + +Y+ + KL Sbjct: 309 IASMDRVFEFIDEPYELTDKPNAIKADQIRGGVEFQN-------VSFQYEKDKENILHDVSLKVNRGETVALVGMSGGGKSTLV-SLIPRFYDVT--SGRLLIDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIIEAAKAANAHEFIMSFPEGYETRVGERGVK-LSGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQEAMDKL 524
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: Y887_METMA (Putative ABC transporter ATP-binding protein MM_0887 OS=Methanosarcina mazei GN=MM_0887 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 59/183 (32.24%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA-----LAYGTSAYVTQD--DALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 GE +A++G +G GKSTL L G L +GE+L+ G K + GT V QD D ++ + + + L K++ KE EM +GL LSGGQK+ V+I + RP+++ LDEPT+GLD +S V+ I K++ R+ G+ T++ S H Sbjct: 74 GERVAVLGANGAGKSTLFKHLNGILRP---LSGEVLVKGEKITKKNVRMCRGTVGIVFQDPDDQVLAPSVEEDVAFGPINMGLSREEVKMRVKEALEM----VGLNGFEER-----APHHLSGGQKKLVAIAGILAMRPEVIVLDEPTAGLDPLSSARVLKLITKMN-RELGI---TLLLSTH 240
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: UGPC_RHOS1 (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=ugpC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR---KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 719 ++ G+ GE + I+GPSGCGKSTLL +A G AGEI I GR + A V Q+ AL +TV E + Y ++ ++K + +ER + + + L ++ + + LSGGQ++RV++ ++ P LDEP S LD+ + +I +L + Sbjct: 18 VIHGVDLEIADGEFVVIVGPSGCGKSTLLRMVA---GLEEITAGEIAIGGRVVNRLEPRERDIAMVFQNYALYPHMTVRENMAYGLRIA---KLSKAEIEERVARSARMLELGQLLDRK-----PRQLSGGQRQRVAMGRALVRNPAAFLLDEPLSNLDAKLRVQMRLQIKELQR 181
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: THIQ_SALPA (Thiamine import ATP-binding protein thiQ OS=Salmonella paratyphi A GN=thiQ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 51/162 (31.48%), Postives = 86/162 (53.09%), Query Frame = 3 Query: 237 GELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVT---QDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 713 GE +AI+GPSG GKSTLL+ +AG L +G +LI G L + V+ Q++ L + L V + + P ++E+ + ++MG++ M TR+ G LSGGQ++RV++ ++ +L LDEP S LD A +++ ++ + Sbjct: 25 GEQVAILGPSGAGKSTLLNLIAGFLAP---ASGTLLIAGEDHTLTPPSRRPVSMLFQENNLFSHLNVQQNIGLGLN---PGLTLNASQREKRDAIARQMGIESLM-TRLPG----ELSGGQRQRVALARCLVREQPVLLLDEPFSALDPALRQEMLTLVSDI 175
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_ECOLI (Aliphatic sulfonates import ATP-binding protein ssuB OS=Escherichia coli (strain K12) GN=ssuB PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 62/193 (32.12%), Postives = 91/193 (47.15%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782 +L L + G+ +A++G SG GKSTLL LAG T AG++L A + + QD L+ +V + V K Q ++ A + +GL++ R G W A LSGGQK+RV++ ++ RP LL LDEP LD+ + I L Q +HG T++ H S V Sbjct: 26 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGL---ETPTAGDVLAGTTPLAEIQEDTRMMFQDARLLPWKSVIDNVGLGL---------KGQWRDAARRALAAVGLEN----RAGEWPA-ALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQ-EHGF---TVLLVTHDVSEAV 197
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SSUB_ECO57 (Aliphatic sulfonates import ATP-binding protein ssuB OS=Escherichia coli O157:H7 GN=ssuB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 62/193 (32.12%), Postives = 91/193 (47.15%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEV 782 +L L + G+ +A++G SG GKSTLL LAG T AG++L A + + QD L+ +V + V K Q ++ A + +GL++ R G W A LSGGQK+RV++ ++ RP LL LDEP LD+ + I L Q +HG T++ H S V Sbjct: 26 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGL---ETPTAGDVLAGTTPLAEIQEDTRMMFQDARLLPWKSVIDNVGLGL---------KGQWRDAARRALAAVGLEN----RAGEWPA-ALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQ-EHGF---TVLLVTHDVSEAV 197 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |