CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_ECOLI (Macrolide export ATP-binding/permease protein macB OS=Escherichia coli (strain K12) GN=macB PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 65/218 (29.82%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 144 LTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALA--GRLGSNT-RQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKER---AEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770 L +D+ + P G ++ +L+G++ GE++AI+G SG GKSTL++ L + S T R AG+ + ALA ++ Q L++ LT + V ++P L++K+R A+ ++ +GL+D + LSGGQ++RVSI ++ +++ DEPT LDS + VM+ + +L R H T+I H P Sbjct: 5 LELKDIRRSYPAGDEQVE--VLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNV------EVPAVYAGLERKQRLLRAQELLQRLGLEDRTE-----YYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGH-----TVIIVTHDP 204
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB_ECOL5 (Macrolide export ATP-binding/permease protein macB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=macB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 65/218 (29.82%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 144 LTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALA--GRLGSNT-RQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKER---AEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770 L +D+ + P G ++ +L+G++ GE++AI+G SG GKSTL++ L + S T R AG+ + ALA ++ Q L++ LT + V ++P L++K+R A+ ++ +GL+D + LSGGQ++RVSI ++ +++ DEPT LDS + VM+ + +L R H T+I H P Sbjct: 5 LELKDIRRSYPAGDEQVE--VLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNV------EVPAVYAGLERKQRLLRAQELLQRLGLEDRTE-----YYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGH-----TVIIVTHDP 204
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: MACB1_ECOK1 (Macrolide export ATP-binding/permease protein macB 1 OS=Escherichia coli O1:K1 / APEC GN=macB1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 65/218 (29.82%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 144 LTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALA--GRLGSNT-RQAGEILINGRKRALAYGTS---AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKER---AEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQP 770 L +D+ + P G ++ +L+G++ GE++AI+G SG GKSTL++ L + S T R AG+ + ALA ++ Q L++ LT + V ++P L++K+R A+ ++ +GL+D + LSGGQ++RVSI ++ +++ DEPT LDS + VM+ + +L R H T+I H P Sbjct: 5 LELKDIRRSYPAGDEQVE--VLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNV------EVPAVYAGLERKQRLLRAQELLQRLGLEDRTE-----YYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGH-----TVIIVTHDP 204
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LPTB_SHIFL (Lipopolysaccharide export system ATP-binding protein lptB OS=Shigella flexneri GN=lptB PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 51/186 (27.42%), Postives = 96/186 (51.61%), Query Frame = 3 Query: 198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRAL------AYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737 R +++ ++ GE++ ++GP+G GK+T + G + R AG I+I+ +L A Y+ Q+ ++ L+V + + A LQ+ D ++ Q+++RA ++E ++ ++ + LSGG++RRV I + PK + LDEP +G+D + + I L RD G+G Sbjct: 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIV---PRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLM--AVLQIRDDLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHL--RDSGLG 189
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LPTB_ECOLI (Lipopolysaccharide export system ATP-binding protein lptB OS=Escherichia coli (strain K12) GN=lptB PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 51/186 (27.42%), Postives = 96/186 (51.61%), Query Frame = 3 Query: 198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRAL------AYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737 R +++ ++ GE++ ++GP+G GK+T + G + R AG I+I+ +L A Y+ Q+ ++ L+V + + A LQ+ D ++ Q+++RA ++E ++ ++ + LSGG++RRV I + PK + LDEP +G+D + + I L RD G+G Sbjct: 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIV---PRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLM--AVLQIRDDLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHL--RDSGLG 189
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LPTB_ECOL6 (Lipopolysaccharide export system ATP-binding protein lptB OS=Escherichia coli O6 GN=lptB PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 51/186 (27.42%), Postives = 96/186 (51.61%), Query Frame = 3 Query: 198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRAL------AYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737 R +++ ++ GE++ ++GP+G GK+T + G + R AG I+I+ +L A Y+ Q+ ++ L+V + + A LQ+ D ++ Q+++RA ++E ++ ++ + LSGG++RRV I + PK + LDEP +G+D + + I L RD G+G Sbjct: 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIV---PRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLM--AVLQIRDDLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHL--RDSGLG 189
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: LPTB_ECO57 (Lipopolysaccharide export system ATP-binding protein lptB OS=Escherichia coli O157:H7 GN=lptB PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 51/186 (27.42%), Postives = 96/186 (51.61%), Query Frame = 3 Query: 198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRAL------AYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVG 737 R +++ ++ GE++ ++GP+G GK+T + G + R AG I+I+ +L A Y+ Q+ ++ L+V + + A LQ+ D ++ Q+++RA ++E ++ ++ + LSGG++RRV I + PK + LDEP +G+D + + I L RD G+G Sbjct: 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIV---PRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLM--AVLQIRDDLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHL--RDSGLG 189
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: HRTA_STAS1 (Putative hemin import ATP-binding protein hrtA OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=hrtA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 53/183 (28.96%), Postives = 88/183 (48.09%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--------RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRI 704 G + +L+G+ GE + + G SG GK+TLL L G L ++ +G+IL N + L ++ Q L+ L V + + MT + +RAE +K++GL N R+ + LSGG+K+RV+I ++ PK++ DEPT+ LD+ + V+ I Sbjct: 13 GNGQSETPVLKGINFNVNEGEFVILNGASGSGKTTLLTILGGLL---SQSSGDILYNNQPLFTRDRKASELRLNEIGFIFQSSHLVPYLKVKAQL---TTIGKEAGMTMQEANQRAETLLKQIGL----NHRLTAFPHM-LSGGEKQRVAIVRALMNHPKIILADEPTASLDAERATEVIEMI 184
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: FHUC_BACSU (Iron(3+)-hydroxamate import ATP-binding protein fhuC OS=Bacillus subtilis GN=fhuC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 57/200 (28.50%), Postives = 104/200 (52.00%), Query Frame = 3 Query: 192 GNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALI-------TTLTVSEAVYYSAQLQLPDTMTKLQKKERA--EMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIH 764 G+R I++ L G++ ++GP+GCGKST+L ++ + S+ AG + +NG+ A+ ++ + +D A++ + LTV E V Y + +L ++R + ++E G+ + I + LSGGQ++RV I + + +LL LDEPT+ LD A ++ + +L++ RTI+ IH Sbjct: 14 GDRVIVEDLNISIPKGKITTLIGPNGCGKSTILKTMSRIMRSH---AGAVYLNGK--AIHKMSTKDIAKDMAILPQTPEAPSGLTVHELVSYG-RFPHQSGFGRLNDEDRRIIKWALEETGMAEYAERPI-----EALSGGQRQRVWIAMALAQGTELLLLDEPTTYLDLAHQLEILQLLDRLNKEQ----GRTILMVIH 198
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: CBIO_METTH (Putative cobalt import ATP-binding protein cbiO OS=Methanobacterium thermoautotrophicum GN=cbiO PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11 Identity = 54/182 (29.67%), Postives = 89/182 (48.90%), Query Frame = 3 Query: 153 QDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQ---------DDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLD 671 +DL + PDG L+G+ GE +A++GP+G GKSTL L G L AGE++I+G + + + Q DD L + + + L LP+ + +ER +++++G+ N LSGG+K+RV+I + +P+++ LDEPT+GLD Sbjct: 5 RDLSYSYPDGTPA-----LRGINMKVERGERVAVIGPNGAGKSTLFLHLNGILKP---AAGEVIIDGERVDYSKDELIKIRQKVGIVFQNPDDQLFSPTVREDVAFGPMNLGLPED----EVEERVAESLEKVGMSGYENR-----APHHLSGGEKKRVAIAGILAMKPEIMVLDEPTTGLD 169 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |