CX043997

Overview
NameCX043997
Unique NameCX043997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PAT14_SOLTU (Patatin-14 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.118e-37
Identity = 92/222 (41.44%), Postives = 136/222 (61.26%), Query Frame = -3 
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPHY  T  S+ G    F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  177 DAKMYDICYSTAAAPIYFPPHYFITHTSN-GDIYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380
[Close]
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PAT12_SOLTU (Patatin-12 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.118e-37
Identity = 92/222 (41.44%), Postives = 136/222 (61.26%), Query Frame = -3 
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPHY  T  S+ G    F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  178 DAKMYDICYSTAAAPIYFPPHYFITHTSN-GDIYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IRQMTNAASSYMADYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 381
[Close]
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PAT11_SOLTU (Patatin-11 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.319e-37
Identity = 91/222 (40.99%), Postives = 136/222 (61.26%), Query Frame = -3 
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPH+  T  S+ G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ L G    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  178 DAKMYDICYSTAAAPIYFPPHHFVTHTSN-GATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 381
[Close]
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PAT10_SOLTU (Patatin-10 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.319e-37
Identity = 92/222 (41.44%), Postives = 135/222 (60.81%), Query Frame = -3 
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPHY  T  S+ G    F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS + K R
Sbjct:  177 DAKMYDICYSTAAAPIYFPPHYFITHTSN-GDIYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSNRKKLR 380
[Close]
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PAT04_SOLTU (Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.319e-37
Identity = 91/222 (40.99%), Postives = 136/222 (61.26%), Query Frame = -3 
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPH+  T  S+ G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ L G    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  177 DAKMYDICYSTAAAPIYFPPHHFVTHTSN-GATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380
[Close]
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PT2K4_SOLTU (Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.072e-37
Identity = 91/222 (40.99%), Postives = 136/222 (61.26%), Query Frame = -3 
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPHY  T  S+ G    F+LVDGGVA   +P LL++S ++ ++ + +P+F     +D + ML+LSLGTGT  + +  Y A + +KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  165 DAKMYDICYSTAAAPIYFPPHYFVTHTSN-GDRYEFNLVDGGVATVGDPALLSLS-VATKLAQVDPKFASIKSLDYKQMLLLSLGTGTNSEFDKTYTAQETAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 368
[Close]
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PATB1_SOLTU (Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 9.072e-37
Identity = 91/222 (40.99%), Postives = 135/222 (60.81%), Query Frame = -3 
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC S +AAP YFPPH+  T  S+ G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS + K R
Sbjct:  177 DAKMYDICYSIAAAPIYFPPHHFVTHTSN-GATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQLTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSNRKKLR 380
[Close]
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PAT0_SOLTU (Patatin OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.185e-36
Identity = 91/222 (40.99%), Postives = 135/222 (60.81%), Query Frame = -3 
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPH+  T  S+ G T  F+LVDG VA   +P LL++S ++  + + +P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  177 DAKMYDICYSTAAAPIYFPPHHFVTHTSN-GATYEFNLVDGAVATVGDPALLSLS-VATRLAQDDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380
[Close]
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PT2K1_SOLTU (Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.547e-36
Identity = 91/222 (40.99%), Postives = 135/222 (60.81%), Query Frame = -3 
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPHY  T  S+ G    F+LVDG VA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  165 DAKMYDICYSTAAAPIYFPPHYFVTHTSN-GDRYEFNLVDGAVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWLLA-----IQQMTNAASSYMTDYYLSTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 368
[Close]
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PAT07_SOLTU (Patatin-07 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.547e-36
Identity = 90/222 (40.54%), Postives = 135/222 (60.81%), Query Frame = -3 
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A+++DIC ST+AAPTYFPPHY  T  S+ G    F+LVDG VA   +P LL++S ++    +++P F     ++ + +L+LSLGTGT  + +  + A + +KWG  +W+       I  +    SS + D+++S +FQ   S++NYLR+Q++ LTG     D A+E NM+ LV+ G  LLK+ VS+ N E           T EEAL  FAKLLS++ KFR
Sbjct:  177 DAKMSDICYSTAAAPTYFPPHYFATNTSN-GDKYEFNLVDGAVATVADPALLSVS-VATRRAEEDPAFASIRSLNYKQLLLLSLGTGTNSEFDKTHTAQETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKFR 380
The following BLAST results are available for this feature:
BLAST of CX043997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PAT14_SOLTU3.118e-3741.44Patatin-14 OS=Solanum tuberosum PE=2 SV=1[more]
PAT12_SOLTU3.118e-3741.44Patatin-12 OS=Solanum tuberosum PE=2 SV=1[more]
PAT11_SOLTU5.319e-3740.99Patatin-11 OS=Solanum tuberosum PE=2 SV=1[more]
PAT10_SOLTU5.319e-3741.44Patatin-10 OS=Solanum tuberosum PE=2 SV=1[more]
PAT04_SOLTU5.319e-3740.99Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K4_SOLTU9.072e-3740.99Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 ... [more]
PATB1_SOLTU9.072e-3740.99Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2[more]
PAT0_SOLTU1.185e-3640.99Patatin OS=Solanum tuberosum PE=3 SV=1[more]
PT2K1_SOLTU1.547e-3640.99Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 ... [more]
PAT07_SOLTU1.547e-3640.54Patatin-07 OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G05-N10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043997 ID=CX043997; Name=CX043997; organism=Citrus sinensis; type=EST; length=827bp
CTTTATTTTAATAGTAATAATCTTATTAATTCGTAGAGTCCAATTGGAAG
CACTTTGTGTCGGATTGATTACACATAAAAACACGCATGCGGAATCCTTA
TGCCTTACTCAAATAAAACGAGTTTCAAATTATAAGACTTATTGGCGGCG
GCGGAACTTAAGTTGTTCAGAGAGTAATTTGGCAAAGTGAGCAAGTGCTT
CTTCATTTGTGACCTCTCCGTCAACCTTCTCATATCTGCCAGTCTCCAGG
TTCACCCTCGACACCTGCTCCTTCAACAACTTGGTTCCAGTTTCCACAAG
CCTTTGCATATTCTCCTCCGTGGCAATGTCAACAGATGCTGCATCACCAG
TCAACGTGTCGTCCTGAATTCGAAGGTAGTTGTCCTTGCTTCCGCAGGAT
TGAAAGAGAGCAGACACATGGAAATCAACAATATCGGAGCTTCCATCAGA
GTAGATGTCGAGTATTGGGGTATTGCTATCTTCATAGATCCATTCGAAAA
TGCCCCACTTGGAGGCTTTGGCTGCATTGTACTTCAATTCTTTCTTGGCT
GTACCTGTGCCTAGTGATAGTACCAGCATATCTCTACCGTCCATTGGGTT
TTTGTCCCTGAACTGGGGGTTCTGCTTCACCATTTCCTTCGATATGTGGC
TTATTGCCAATAGGGTAGGATTATTAGCAGCAACTCCACCGTCAACAAGA
TCAAAAGTGCGGGTTCCGCCACTGTCACTGTCCTTAGTCTCCAAGTAGTG
AGGTGGGAAGTAAGTGGGCGCTGCAGAAGTGCTGATGCATATATCAGCCA
GCCGAGCATTCTTCAAAACGTTCTCTT
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