CX043996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.905e-14 Identity = 58/159 (36.48%), Postives = 79/159 (49.69%), Query Frame = 3 Query: 231 VFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPI--EGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKST-TIFQNYTILQVPKPMFAPK---MVACHIMPYPYAIFYCHS 689 VFF KDL G + ++F + A L R AD+IPF+ ++LP +L S S A+ M TL CE + + K C TSLESM++F + G V T + T Q YT+ V KP+ + MV CH MPY YA+F CH+ Sbjct: 97 VFFLEKDLFPGSKITLHFTRGGACA--MVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECEAALLGARDQAKHCVTSLESMVEFAAASLGTRDIRAVSTEVIGTGAAETPRQEYTVEAV-KPVVSVSGGNMVTCHGMPYAYAVFGCHT 252
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 51/152 (33.55%), Postives = 70/152 (46.05%), Query Frame = 3 Query: 234 FFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHS 689 FF K LK G MP+ K D LPR A +PFS ++ L + F ++DS +AK + L+ CE P GETK C S E M+DF G + T +K + + + K K V+CH YP ++YCHS Sbjct: 417 FFREKMLKSGTIMPMPDIK-DKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGK---VTKSVSCHQTLYPSLLYYCHS 564
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 51/152 (33.55%), Postives = 70/152 (46.05%), Query Frame = 3 Query: 234 FFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHS 689 FF K LK G MP+ K D LPR A +PFS ++ L + F ++DS +AK + L+ CE P GETK C S E M+DF G + T +K + + + K K V+CH YP ++YCHS Sbjct: 414 FFREKMLKSGTIMPMPDIK-DKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGK---VTKSVSCHQTLYPSLLYYCHS 561
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 53/152 (34.87%), Postives = 70/152 (46.05%), Query Frame = 3 Query: 234 FFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHS 689 FF K LK G MP+ K D LPR A +PFS ++ L + F D+S + K + L+ CE P GETK C S E M+DF G V+ TT TK + ++ K V+CH YPY ++YCHS Sbjct: 415 FFREKMLKSGTIMPMPDIK-DKMPKRSFLPRVIASKLPFSTSKIAELKKIFHAGDESQVEKMIGDALSECERAPSAGETKRCVNSAEDMIDFATSVLGRNV---VVRTTEDTKGSNGNIMIGSVKGINGGKVTKSVSCHQTLYPYLLYYCHS 562
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: JP650_ARATH (Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 45/152 (29.61%), Postives = 64/152 (42.11%), Query Frame = 3 Query: 234 FFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHS 689 FF LK G +P+ K D LPR +PFS +L + + F ++S + + + CE PP GETK C S E M+DF G + +K + + K K V+CH YPY ++YCHS Sbjct: 411 FFRESSLKEGTVIPMPDIK-DKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRTTENVAGSKEKVVIGKVNGINGGK---LTKAVSCHQSLYPYLLYYCHS 558
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: BURPC_ORYSJ (BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 51/159 (32.08%), Postives = 73/159 (45.91%), Query Frame = 3 Query: 219 PSTMVFFTLKDLKIGETMPI--YFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHS 689 P FF +L G TMP+ K P A+ LPR+ A IPF + + F D+ + KA+ T+ CE P GETK CATS E ++DF G + + +T + N T + K + V+CH +PY ++YCHS Sbjct: 410 PEPGKFFRETELVSGNTMPMPDIKDKMPPRAF---LPRDIAKKIPFKPNAVS---EVFGVPLDTAMGKAVTSTVAECERAPSRGETKRCATSAEDIVDFAVEMLGNDIVVRSTASTAGSGGQIRLGNVTGVDGGK---VTRSVSCHQSLFPYLVYYCHS 559
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: BURPG_ORYSJ (BURP domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=BURP16 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 51/157 (32.48%), Postives = 80/157 (50.96%), Query Frame = 3 Query: 231 VFFTLKDLKIGETMPIYFRKRD-PSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKM---VACHIMPYPYAIFYCHS 689 +FF ++LK G + + + +A LPR AD IPF + + L F ++ LAKA++ T+ C+ P +GETK C TS E M+DF G + V+ +T L ++ I +V K + K+ V+CH +PY ++YCHS Sbjct: 127 IFFREQELKEGNVVRMPDIANELTTARSSFLPRSIADRIPFKAEAVKSL---FGLEPNTTLAKAVDETVAQCQSSPSKGETKRCVTSAEDMIDFAVAMLGDDI---VVRSTVLPNGPG--ESIMIGKV-KGINGGKITSSVSCHEYLFPYMVYYCHS 274 The following BLAST results are available for this feature:
BLAST of CX043996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043996 ID=CX043996; Name=CX043996; organism=Citrus sinensis; type=EST; length=711bpback to top |