CX043974

Overview
NameCX043974
Unique NameCX043974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043974 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOLC (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=cysJ PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.607e-37
Identity = 85/225 (37.78%), Postives = 137/225 (60.89%), Query Frame = 1
Query:    1 PRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSXAESMVKNLQMTGRYLRDVW 672
            PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  385 PRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599          
BLAST of CX043974 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOHS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O9:H4 (strain HS) GN=cysJ PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.607e-37
Identity = 85/225 (37.78%), Postives = 137/225 (60.89%), Query Frame = 1
Query:    1 PRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSXAESMVKNLQMTGRYLRDVW 672
            PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  385 PRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599          
BLAST of CX043974 vs. ExPASy Swiss-Prot
Match: CYSJ_ECO24 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=cysJ PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.607e-37
Identity = 85/225 (37.78%), Postives = 137/225 (60.89%), Query Frame = 1
Query:    1 PRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSXAESMVKNLQMTGRYLRDVW 672
            PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  385 PRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599          
BLAST of CX043974 vs. ExPASy Swiss-Prot
Match: REDA_DICDI (NADPH oxidoreductase A OS=Dictyostelium discoideum GN=redA PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.017e-37
Identity = 88/226 (38.94%), Postives = 134/226 (59.29%), Query Frame = 1
Query:    1 PRYYSISSSPRVAPSRIHVT-CALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSXAESMVKNLQMTGRYLRDVW 672
            PRYYSI+SS  ++ +++ V+ C  V +    G    G+ ST M      ++ N      IF+  + +F+LP D   PI+M+GPGTG+APF  F+QER AL   G     + L+FGCR    D++Y  EL  +   G L +L  AFSRE   K YVQ++++E S  I ++++ G ++Y+CGDAK MA  VH TL  I+ +  S+D + A++++  L+   RY +DVW
Sbjct:  417 PRYYSIASS--MSENKLAVSLCVAVVKYDLHGSERVGIASTHMA-----DRMNVGDRVSIFINNNPDFRLPEDPTTPILMVGPGTGIAPFVSFIQERKALGHTGE----NHLYFGCRRSDEDFLYSKELQQYHNDG-LIKLYTAFSRETSQKVYVQNRLLENSQQICDLINAGGHIYICGDAKSMAPQVHETLSLIITKHMSIDEADAQALLHKLEKEKRYQKDVW 630          
BLAST of CX043974 vs. ExPASy Swiss-Prot
Match: CYSJ_YERE8 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=cysJ PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.017e-37
Identity = 85/225 (37.78%), Postives = 135/225 (60.00%), Query Frame = 1
Query:    1 PRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSXAESMVKNLQMTGRYLRDVW 672
            PR YSI+SS     + +HVT  +V      GR   G  S ++ + L ++         IF+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R    EA    G + L FG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++WN + +GA++YVCGDA  MA+DV + L  +V   G++D+  A+  +  L++  RY RDV+
Sbjct:  387 PRLYSIASSQAETENEVHVTVGVVRYDID-GRPRTGGASGYLADRLEVDGD-----IRIFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR----EADGATGKNWLLFGNPHFTEDFLYQVEWQRYVKDGLLTRIDLAWSRDQADKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRLARRYQRDVY 601          
BLAST of CX043974 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTY (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhimurium GN=cysJ PE=3 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 6.017e-37
Identity = 85/225 (37.78%), Postives = 136/225 (60.44%), Query Frame = 1
Query:    1 PRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSXAESMVKNLQMTGRYLRDVW 672
            PR YSI+S+     S +H+T  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG  +   D++Y+ E   +V+ G LS++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA+ MA DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  385 PRLYSIASAQAEVESEVHITVGVVRYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAA---EGVE-GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599          
BLAST of CX043974 vs. ExPASy Swiss-Prot
Match: CYSJ_SALPB (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=cysJ PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.017e-37
Identity = 85/225 (37.78%), Postives = 136/225 (60.44%), Query Frame = 1
Query:    1 PRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSXAESMVKNLQMTGRYLRDVW 672
            PR YSI+S+     S +H+T  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG  +   D++Y+ E   +V+ G LS++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA+ MA DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  385 PRLYSIASAQAEVESEVHITVGVVCYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAA---EGVE-GKNWLFFGNPHFTEDFLYQVEWQRYVKEGGLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599          
BLAST of CX043974 vs. ExPASy Swiss-Prot
Match: CYSJ_SALCH (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella choleraesuis GN=cysJ PE=3 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 7.858e-37
Identity = 85/225 (37.78%), Postives = 137/225 (60.89%), Query Frame = 1
Query:    1 PRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSXAESMVKNLQMTGRYLRDVW 672
            PR YSI+S+     S +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA+ MA DV + L  ++ E G++D   A+  +  L++  RY RDV+
Sbjct:  385 PRLYSIASAQAEVESEVHVTVGVVRYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAA---EGAE-GKNWLFFGNPHFTEDFLYQVEWQRYVKEGMLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGAMDIEAADEFLSELRVERRYQRDVY 599          
BLAST of CX043974 vs. ExPASy Swiss-Prot
Match: CYSJ_BUCAP (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysJ PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.858e-37
Identity = 85/225 (37.78%), Postives = 135/225 (60.00%), Query Frame = 1
Query:    1 PRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSXAESMVKNLQMTGRYLRDVW 672
            PR YSISSS       +H+T  +V +K  +G +H G  S+++   L ++ S       IFV + SNF+LP +  VPIIMIG GTG+APFR F+Q+R    +     G + +FFG  N   D++Y+ E   +++   L+++ +A+SR+   K YVQ K+ E   ++W  +++GA +YVCG+A  MA+DV + L  +  + GS+D   +   + NL++T RY RDV+
Sbjct:  388 PRLYSISSSQSEMNDEVHITVGVV-KKQISGTIHLGGSSSYLSQFLKIDDS-----VKIFVEEKSNFRLPENKDVPIIMIGSGTGIAPFRAFIQQR----DNDKATGKNWIFFGNPNFTEDFLYQLEWQKYLKKKLLTKMSLAWSRDQKEKIYVQDKIRENGKELWEWVNQGAQIYVCGNASKMAKDVEKELLDVFSKNGSMDIEESSEFLNNLRITRRYQRDVY 602          
BLAST of CX043974 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIBS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella boydii serotype 4 (strain Sb227) GN=cysJ PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.026e-36
Identity = 85/225 (37.78%), Postives = 136/225 (60.44%), Query Frame = 1
Query:    1 PRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAYLYVCGDAKGMARDVHRTLHTIVQEQGSLDSSXAESMVKNLQMTGRYLRDVW 672
            PR YSI+SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+  ++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  385 PRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDIEAADEFLSELRVERRYQRDVY 599          
The following BLAST results are available for this feature:
BLAST of CX043974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
CYSJ_ECOLC4.607e-3737.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOHS4.607e-3737.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECO244.607e-3737.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
REDA_DICDI6.017e-3738.94NADPH oxidoreductase A OS=Dictyostelium discoideum... [more]
CYSJ_YERE86.017e-3737.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALTY6.017e-3737.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALPB6.017e-3737.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALCH7.858e-3737.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_BUCAP7.858e-3737.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIBS1.026e-3637.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14F03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14F03-L6-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043974 ID=CX043974; Name=CX043974; organism=Citrus sinensis; type=EST; length=758bp
CCAAGATATTATTCAATTTCATCTTCTCCAAGGGTTGCACCATCTAGAAT
TCATGTTACCTGTGCTCTGGTTTATGAGAAAACACCAACAGGACGTGTTC
ACAAAGGATTGTGCTCCACTTGGATGAAGAATTCTTTGCCAATGGAGAAA
AGCAATGACTGCAGCTGGGCACCCATTTTTGTTAGGCAATCAAACTTCAA
ACTCCCTGCAGATGCTAAAGTGCCTATCATTATGATTGGCCCTGGCACTG
GATTAGCTCCTTTCAGGGGTTTCCTACAGGAAAGGTTTGCTCTGAAGGAA
GCTGGAACAGAACTGGGACCCTCTCTATTATTTTTTGGATGCAGGAACCG
TAAGATGGATTACATTTATGAGGATGAGCTCAACAACTTTGTTCAAAGTG
GTGCACTTTCACAGTTGATTGTTGCCTTCTCACGTGAGGGACCCATCAAG
GAATATGTGCAGCATAAAATGATGGAGAAGTCTTGGGATATCTGGAACAT
GCTTTCTGAGGGAGCTTACTTGTATGTTTGTGGTGATGCCAAAGGCATGG
CTAGAGATGTCCACCGAACTCTGCACACTATTGTTCAAGAGCAGGGATCT
CTTGACAGCTCTNAAGCTGAGAGCATGGTGAAGAATTTGCAAATGACTGG
CAGGTATCTACGTGATGTATGGTGACCATCCTTCTGATCCTGAGTCTTCT
CACTAGTAAAATTCGAAGGTGATTGCATAATACATACATAAATATGTTAT
CTCGGGCC
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