DN134784

Overview
NameDN134784
Unique NameDN134784
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12825 contig Csv1_Contig12825:286..911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A14_ARATH (1-aminocyclopropane-1-carboxylate synthase 4 OS=Arabidopsis thaliana GN=ACS4 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.941e-43
Identity = 78/167 (46.71%), Postives = 118/167 (70.66%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAE 512
            RVHI+  LSKDL LPGFR G IYS ++ V++AA K++ F  +S+ TQ LL S+LSD KF + YL  N++R+K      V GL+ +GI+C +S+AGL+CW DM  L+ S + + E++LW K++   K+N++PGS+CHC EPGWFR CF ++  E + L ++R++ + +
Sbjct:  264 RVHIVCSLSKDLGLPGFRVGAIYSNDKDVISAATKMSSFGLVSSQTQYLLSSLLSDKKFTKNYLRENQKRLKNRQRKLVLGLEAIGIKCLKSNAGLFCWVDMRPLLRSKTFEAEMDLWKKIVYEVKLNISPGSSCHCEEPGWFRVCFANMIDETLKLALKRLKMLVD 430          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A12_CUCMA (1-aminocyclopropane-1-carboxylate synthase CMA101 OS=Cucurbita maxima GN=ACS2 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.147e-43
Identity = 79/163 (48.47%), Postives = 113/163 (69.33%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 500
            RVHI+Y LSKDL LPGFR G IYS ++ V+AAA K++ F  +S+ TQ LL +MLSD KF   Y+  N++R+K+     V+GL+  GI C +S+AGL+CW DM  L+ S   + ELELW K++    +N++PGS+CHC EPGWFR CF +++   + L + R++
Sbjct:  263 RVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSAMLSDKKFTISYISENQKRLKQRQKMLVSGLQKAGINCLDSNAGLFCWVDMRHLLESDKFESELELWKKIVYEVGLNISPGSSCHCTEPGWFRVCFANMSESTLKLAVRRLK 425          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A1C_MALDO (1-aminocyclopropane-1-carboxylate synthase OS=Malus domestica GN=ACS-1 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 9.708e-42
Identity = 76/163 (46.63%), Postives = 111/163 (68.10%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 500
            RVH++Y LSKDL LPGFR G IYS ++ V+AAA K++ F  +S+ TQ LL +MLSD K  + Y+  N +R+K+     V+GL+  GI C   +AGL+CW DM  L+ S + + E+ELW K++    +N++PGS+CHC EPGWFR CF +L    + L ++R++
Sbjct:  264 RVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLK 426          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A14_SOLLC (1-aminocyclopropane-1-carboxylate synthase 4 OS=Solanum lycopersicum GN=ACS4 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.644e-39
Identity = 69/162 (42.59%), Postives = 111/162 (68.52%), Query Frame = 3
Query:   15 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 500
            VHI+  LSKDL  PGFR G++YS+N+ V+  A+K++ F  +S  TQ LL  MLSD +F++E+L  + +R+++ Y+ F  GL+ +GI+C ES+AG+YCW D+  L+   +   E+ LW  ++N  K+NV+PGS+ +C E GWFR CF ++  + + + + RI+
Sbjct:  274 VHIVSSLSKDLGFPGFRVGIVYSFNDDVVNCARKMSSFGLVSTQTQHLLAFMLSDDEFVEEFLIESAKRLRERYEKFTRGLEEIGIKCLESNAGVYCWMDLRSLLKEATLDAEMSLWKLIINEVKLNVSPGSSFNCSEVGWFRVCFANIDDQTMEIALARIR 435          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A11_PRUMU (1-aminocyclopropane-1-carboxylate synthase 1 OS=Prunus mume GN=ACS1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.644e-39
Identity = 70/165 (42.42%), Postives = 111/165 (67.27%), Query Frame = 3
Query:    6 PGRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 500
            P  +HI+Y LSKD+ LPG R G++YSYN+ V+   +K++ F  +S+ TQ +L SML D +F+  +LET+ +R+ K +  F  GL+ +GI C +S+AGL+CW D+  L+   +  GE+ LW  ++N    NV+PGS+  C+EPGWFR CF ++  E + + ++RI+
Sbjct:  266 PNLIHIVYSLSKDMGLPGLRVGIVYSYNDDVVNIGRKMSSFGLVSSQTQHMLPSMLLDEEFVARFLETSPKRLAKRHGVFTKGLEEVGINCLKSNAGLFCWMDLRRLLEDQTFDGEMVLWRVIVNEVGPNVSPGSSFKCVEPGWFRVCFANMDDETLEVALKRIR 430          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A1C_SOYBN (1-aminocyclopropane-1-carboxylate synthase OS=Glycine max GN=ACS1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.238e-38
Identity = 69/162 (42.59%), Postives = 111/162 (68.52%), Query Frame = 3
Query:   15 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 500
            VHI+Y LSKD+  PGFR G+IYSYN++V+  A+K++ F  +S  TQ LL SML+D +F++ +L  + +R+ + +  F  GL  +GI+C +S+AGL+ W D+  L+   +   E+ELW  +++  KINV+PGS+ HC EPGWFR C+ ++    + + ++RI+
Sbjct:  271 VHIVYSLSKDMGFPGFRVGIIYSYNDAVVHCARKMSSFGLVSTQTQYLLASMLNDDEFVESFLVESAKRLAQRHRVFTGGLAKVGIKCLQSNAGLFVWMDLRQLLKKPTLDSEMELWRVIIDEVKINVSPGSSFHCTEPGWFRVCYANMDDMAVQIALQRIR 432          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A1C_TOBAC (1-aminocyclopropane-1-carboxylate synthase OS=Nicotiana tabacum GN=ACS1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.923e-38
Identity = 69/162 (42.59%), Postives = 109/162 (67.28%), Query Frame = 3
Query:   15 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 500
            VHI+Y LSKD+ LPGFR G++YS+N++V+  A+K++ F  +S  TQ LL  MLSD +F+  +L  + +R+ K +  F  GL+ +GI+C  S+AGL+CW D+  L+   +   E+ LW  ++N  K+NV+PGS+  C EPG+FR CF ++  E + + + RI+
Sbjct:  270 VHIVYSLSKDMGLPGFRVGIVYSFNDAVVNCARKMSSFGLVSTQTQYLLAEMLSDERFVSNFLTESSKRLAKRHKHFTNGLEEVGIKCLRSNAGLFCWMDLRPLLKESTFDSEMSLWRVIINDVKLNVSPGSSFDCQEPGFFRVCFANMDDETVDIALARIR 431          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A12_SOLLC (1-aminocyclopropane-1-carboxylate synthase 2 OS=Solanum lycopersicum GN=ACS2 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 3.817e-38
Identity = 69/163 (42.33%), Postives = 108/163 (66.26%), Query Frame = 3
Query:   15 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQK 503
            VHI+Y LSKD+ LPGFR G+IYS+N+ V+  A+K++ F  +S  TQ  L +MLSD KF+  +L  +  R+ K +  F  GL+ +GI+C +++AGL+CW D+  L+   +   E+ LW  ++N  K+NV+PGS+  C EPGWFR CF ++    + + + RI++
Sbjct:  270 VHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRR 432          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A11_CUCPE (1-aminocyclopropane-1-carboxylate synthase 1 OS=Cucurbita pepo GN=ACC1A PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.111e-37
Identity = 69/166 (41.57%), Postives = 107/166 (64.46%), Query Frame = 3
Query:   15 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAE 512
            +HI+Y LSKD+ LPGFR G+IYSYN+ V+  A++++ F  +S+ TQ LL +MLSD  F+ ++L  N +R+ + +  F   L  +GI C  S+AG++ W D+  L+   + K E+ELW  ++N  K+NV+PGS+ H  EPGWFR CF ++    + + + RI    E
Sbjct:  271 IHILYSLSKDMGLPGFRVGIIYSYNDVVVRRARQMSSFGLVSSQTQHLLAAMLSDEDFVDKFLAENSKRVGERHARFTKELDKMGITCLNSNAGVFVWMDLRRLLKDQTFKAEMELWRVIINEVKLNVSPGSSFHVTEPGWFRVCFANMDDNTVDVALNRIHSFVE 436          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A11_CUCMA (1-aminocyclopropane-1-carboxylate synthase CMW33 OS=Cucurbita maxima GN=ACS1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.111e-37
Identity = 69/166 (41.57%), Postives = 107/166 (64.46%), Query Frame = 3
Query:   15 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAE 512
            +HI+Y LSKD+ LPGFR G+IYSYN+ V+  A++++ F  +S+ TQ LL +MLSD  F+ ++L  N +R+ + +  F   L  +GI C  S+AG++ W D+  L+   + K E+ELW  ++N  K+NV+PGS+ H  EPGWFR CF ++    + + + RI    E
Sbjct:  271 IHILYSLSKDMGLPGFRVGIIYSYNDVVVRRARQMSSFGLVSSQTQHLLAAMLSDEDFVDKFLAENSKRLAERHARFTKELDKMGITCLNSNAGVFVWMDLRRLLKDQTFKAEMELWRVIINEVKLNVSPGSSFHVTEPGWFRVCFANMDDNTVDVALNRIHSFVE 436          
The following BLAST results are available for this feature:
BLAST of DN134784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
1A14_ARATH3.941e-4346.711-aminocyclopropane-1-carboxylate synthase 4 OS=Ar... [more]
1A12_CUCMA5.147e-4348.471-aminocyclopropane-1-carboxylate synthase CMA101 ... [more]
1A1C_MALDO9.708e-4246.631-aminocyclopropane-1-carboxylate synthase OS=Malu... [more]
1A14_SOLLC2.644e-3942.591-aminocyclopropane-1-carboxylate synthase 4 OS=So... [more]
1A11_PRUMU2.644e-3942.421-aminocyclopropane-1-carboxylate synthase 1 OS=Pr... [more]
1A1C_SOYBN2.238e-3842.591-aminocyclopropane-1-carboxylate synthase OS=Glyc... [more]
1A1C_TOBAC2.923e-3842.591-aminocyclopropane-1-carboxylate synthase OS=Nico... [more]
1A12_SOLLC3.817e-3842.331-aminocyclopropane-1-carboxylate synthase 2 OS=So... [more]
1A11_CUCPE1.111e-3741.571-aminocyclopropane-1-carboxylate synthase 1 OS=Cu... [more]
1A11_CUCMA1.111e-3741.571-aminocyclopropane-1-carboxylate synthase CMW33 O... [more]

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Properties
Property NameValue
Genbank descriptionwca01c03 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01c03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134784 ID=DN134784; Name=DN134784; organism=Citrus sinensis; type=EST; length=626bp
TACGGCCGGGTAGAGTTCATATAATATACGGGTTGTCGAAAGACCTCTCT
CTTCCGGGATTTAGGACCGGGGTTATCTATTCCTATAATGAGAGTGTTTT
GGCCGCTGCCAAAAAATTAACAAGATTTTGTTCTATTTCAGCCCCCACTC
AGAGGCTCCTAATTTCCATGCTCTCAGATACAAAGTTCATCCAGGAATAT
TTAGAGACCAATAAAAGGAGGATAAAGAAACTGTATGATTCATTTGTGGC
AGGTTTGAAATAATTAGGAATCAGGTGCTCAGAGAGCAGTGCTGGCTTAT
ATTGCTGGGCTGATATGAGTGGACTAATCCCCTCTTACAGTGAGAAAGGG
GAACTTGAATTATGGGATAAGCTCTTGAACATTGCTAAGATCAATGTTAC
TCCTGGCTCGGCCTGCCACTGTATAGAACCGGGATGGTTCCGGTGTTGTT
TTACTTCTTTAACCCACGAGGATATCCCTTTAGTCATTGAAAGGATCCAA
AAAGTTGCTGAAACTTGTAAATAAATGCTGAGAGGAATTTCATATGTAAG
ATTATTGCCATCATTAATGTTTTGGGAAAATTATGGGGACATGCACTGCT
TCTTAATTGAACAAAGGTCTAGTTCA
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