DN134784

Overview
NameDN134784
Unique NameDN134784
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12825 contig Csv1_Contig12825:286..911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A12_CUCPE (1-aminocyclopropane-1-carboxylate synthase 2 OS=Cucurbita pepo GN=ACS2 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.451e-37
Identity = 69/166 (41.57%), Postives = 107/166 (64.46%), Query Frame = 3
Query:   15 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAE 512
            +HI+Y LSKD+ LPGFR G+IYSYN+ V+  A++++ F  +S+ TQ LL +MLSD  F+ ++L  N +R+ + +  F   L  +GI C  S+AG++ W D+  L+   + K E+ELW  ++N  K+NV+PGS+ H  EPGWFR CF ++    + + + RI    E
Sbjct:  271 IHILYSLSKDMGLPGFRVGIIYSYNDVVVRRARQMSSFGLVSSQTQHLLAAMLSDEDFVDKFLAENSKRLGERHARFTKELDKMGITCLNSNAGVFVWMDLRRLLKDQTFKAEMELWRVIINEVKLNVSPGSSFHVTEPGWFRVCFANMDDNTVDVALNRIHSFVE 436          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A11_ARATH (1-aminocyclopropane-1-carboxylate synthase-like protein 1 OS=Arabidopsis thaliana GN=ACS1 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 1.895e-37
Identity = 68/162 (41.98%), Postives = 107/162 (66.05%), Query Frame = 3
Query:   15 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 500
            +HI+Y LSKD+ LPGFR GV+YSYN+ V++ A++++ F  +S+ TQ  L +MLSD  F+  +L    +R+ K +  F  GL+ +GI C  S+AGL+   D+  ++   +   E+ LW  ++N  KINV+PGS+ HC EPGWFR CF ++  + + + +ERI+
Sbjct:  265 IHIVYSLSKDMGLPGFRVGVVYSYNDVVVSCARRMSSFGLVSSQTQSFLAAMLSDQSFVDNFLVEVSKRVAKRHHMFTEGLEEMGISCLRSNAGLFVLMDLRHMLKDQTFDSEMALWRVIINKVKINVSPGSSFHCSEPGWFRVCFANMDEDTLQIALERIK 426          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A1C_PHAAU (1-aminocyclopropane-1-carboxylate synthase (Fragment) OS=Phaseolus aureus GN=ACS5 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.736e-36
Identity = 67/146 (45.89%), Postives = 100/146 (68.49%), Query Frame = 3
Query:   15 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCF 452
            VHI+Y LSKD+  PGFR G+IYSYN++V+  A+K++ F  +S  TQ LL SML+D +F++ +L  + +R+ + +  F  GL  +GI+C +S+AGL+ W D+  L+   +   E ELW  +++  KINV+PG + HC EPGWFR CF
Sbjct:  222 VHIVYSLSKDMGFPGFRVGIIYSYNDAVVNCARKMSSFGLVSTQTQYLLASMLNDDEFVERFLAESAKRLAQRFRVFTGGLAKVGIKCLQSNAGLFVWMDLRQLLKKPTFDSETELWKVIIHEVKINVSPGYSFHCTEPGWFRVCF 367          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A16_ARATH (1-aminocyclopropane-1-carboxylate synthase 6 OS=Arabidopsis thaliana GN=ACS6 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.736e-36
Identity = 66/162 (40.74%), Postives = 105/162 (64.81%), Query Frame = 3
Query:   15 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 500
            +HI+Y LSKD+ LPG R G++YSYN+ V+  A+K++ F  +S+ TQ L+  MLSD +F+ E++  +K R+   +     GL  LGI   ++ AGL+ W D+  L+ + +   E ELW  +++  K+NV+PG + HC EPGWFR CF ++ H+ +   +ERI+
Sbjct:  272 IHIVYSLSKDMGLPGLRVGIVYSYNDRVVQIARKMSSFGLVSSQTQHLIAKMLSDEEFVDEFIRESKLRLAARHAEITTGLDGLGIGWLKAKAGLFLWMDLRNLLKTATFDSETELWRVIVHQVKLNVSPGGSFHCHEPGWFRVCFANMDHKTMETALERIR 433          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A12_ARATH (1-aminocyclopropane-1-carboxylate synthase 2 OS=Arabidopsis thaliana GN=ACS2 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.736e-36
Identity = 69/163 (42.33%), Postives = 109/163 (66.87%), Query Frame = 3
Query:   15 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLI-PSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 500
            +HI+Y LSKD+ LPGFR G++YS+N+SV++ A+K++ F  +S+ TQ +L SMLSD +F+  +L  + RR+   +  F  G+K   I C  S+AGL+ W D+  L+    S + E+ELW  +++  K+NV+PGS+  C EPGWFR CF ++  + + + + RIQ
Sbjct:  271 IHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQ 433          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A1C_DIACA (1-aminocyclopropane-1-carboxylate synthase OS=Dianthus caryophyllus GN=ACS2 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.961e-34
Identity = 63/162 (38.89%), Postives = 109/162 (67.28%), Query Frame = 3
Query:   15 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 500
            VHI+Y LSKD+ +PGFR G+IYSYN+ V++ A++++ F  +S+ TQ ++ ++LSD  F++ +L  ++ R+ + +  F + L  +GI C + +A L+ W D+  L+   + + EL+LW  ++N  KINV+PGS+  C EPGWFR CF ++ +  + + + RI+
Sbjct:  269 VHILYSLSKDMGMPGFRVGIIYSYNDRVVSTARRMSSFGLVSSQTQFMIAALLSDDDFVRRFLVESRDRLFRRHQHFTSELAKIGIGCLQGNAALFVWMDLRHLLDEATVERELKLWRVIINEVKINVSPGSSFLCSEPGWFRVCFANMDNATLDVALNRIR 430          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A1L1_BOVIN (1-aminocyclopropane-1-carboxylate synthase-like protein 1 OS=Bos taurus GN=ACCS PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.781e-19
Identity = 56/170 (32.94%), Postives = 88/170 (51.76%), Query Frame = 3
Query:    6 PGRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFI-QEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAE 512
            P R H+++  SKD  + G R G +Y+ N +V  A   L R+  +S   Q  +  +L D  +I Q YL  N  R+K  +      L+ LGI      AG + W D+   +P  + + E+ LW + L   K+ ++ G A  C EPGWFR  F+  TH  + L ++R+++V E
Sbjct:  313 PQRTHVMWATSKDFGMSGLRFGTLYTENWAVATAVASLCRYHGLSGLVQYQMAQLLRDHDWINQVYLPENHARLKAAHTYVSEDLRALGIPFVSRGAGFFIWVDLRKYLPEATFEEEVLLWRRFLE-NKVLLSFGKAFECKEPGWFRLVFSDKTHR-LHLGMQRVRQVLE 480          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A1L1_TAKRU (1-aminocyclopropane-1-carboxylate synthase-like protein 1 OS=Takifugu rubripes GN=accs PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19
Identity = 55/173 (31.79%), Postives = 89/173 (51.45%), Query Frame = 3
Query:    6 PGRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQ-EYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETCK 521
            P R H+++GL KD ++ G R G +YS +  ++ A  KL  F  I   TQR +  +L D ++I  +YL  N+ R+K         L+ L +   + SA ++ WAD+   +   S + E+ LW   L   K+ ++ G A  C  PGWFR  F+      + L ++RI++  E  K
Sbjct:  329 PQRTHVMWGLGKDFAMAGIRVGTLYSESRDLVEAVAKLGAFHGIPGTTQRQVAQLLQDREWIDTQYLPRNRSRLKAARSYVTGELRGLDVPYLDRSAAMFVWADLRKFLAEPSFEEEMRLWRHFLK-HKVVLSCGQAFSCSTPGWFRIVFSDQDRR-LKLGMKRIKEALEEYK 499          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A1L1_HUMAN (1-aminocyclopropane-1-carboxylate synthase-like protein 1 OS=Homo sapiens GN=ACCS PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19
Identity = 55/168 (32.74%), Postives = 87/168 (51.79%), Query Frame = 3
Query:    6 PGRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFI-QEYLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKV 506
            P R H+++  SKD  + G R G +Y+ N+ V  A   L R+  +S   Q  +  +L D  +I Q YL  N  R+K  +      L+ LGI      AG + W D+   +P  + + E+ LW + L+  K+ ++ G A  C EPGWFR  F+   H  + L ++R+Q+V
Sbjct:  312 PQRTHVMWATSKDFGMSGLRFGTLYTENQDVATAVASLCRYHGLSGLVQYQMAQLLRDRDWINQVYLPENHARLKAAHTYVSEELRALGIPFLSRGAGFFIWVDLRKYLPKGTFEEEMLLWRRFLD-NKVLLSFGKAFECKEPGWFRFVFSDQVHR-LCLGMQRVQQV 477          
BLAST of DN134784 vs. ExPASy Swiss-Prot
Match: 1A1L2_HUMAN (1-aminocyclopropane-1-carboxylate synthase-like protein 2 OS=Homo sapiens GN=ACCSL PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.178e-17
Identity = 52/148 (35.14%), Postives = 81/148 (54.73%), Query Frame = 3
Query:   12 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQE-YLETNKRRIKKLYDSFVAGLK*LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCF 452
            R H+I+G SKD  + GFR G +Y++N+ V +A        SIS  TQ  L  +L +T++I + YL TN  R+++ +    A LK L I     S+GLY W ++   +   + + E  L+ + L+  K+ ++ G    C EPGWFR  F
Sbjct:  386 RTHVIWGTSKDFGISGFRFGALYTHNKEVASAVSAFGYLHSISGITQHKLCQLLQNTEWIDKVYLPTNCYRLREAHKYITAELKALEIPFHNRSSGLYVWINLKKYLDPCTFEEERLLYCRFLD-NKLLLSRGKTYMCKEPGWFRLIF 532          
The following BLAST results are available for this feature:
BLAST of DN134784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
1A12_CUCPE1.451e-3741.571-aminocyclopropane-1-carboxylate synthase 2 OS=Cu... [more]
1A11_ARATH1.895e-3741.981-aminocyclopropane-1-carboxylate synthase-like pr... [more]
1A1C_PHAAU2.736e-3645.891-aminocyclopropane-1-carboxylate synthase (Fragme... [more]
1A16_ARATH2.736e-3640.741-aminocyclopropane-1-carboxylate synthase 6 OS=Ar... [more]
1A12_ARATH2.736e-3642.331-aminocyclopropane-1-carboxylate synthase 2 OS=Ar... [more]
1A1C_DIACA1.961e-3438.891-aminocyclopropane-1-carboxylate synthase OS=Dian... [more]
1A1L1_BOVIN1.781e-1932.941-aminocyclopropane-1-carboxylate synthase-like pr... [more]
1A1L1_TAKRU3.039e-1931.791-aminocyclopropane-1-carboxylate synthase-like pr... [more]
1A1L1_HUMAN3.039e-1932.741-aminocyclopropane-1-carboxylate synthase-like pr... [more]
1A1L2_HUMAN2.178e-1735.141-aminocyclopropane-1-carboxylate synthase-like pr... [more]

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Properties
Property NameValue
Genbank descriptionwca01c03 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01c03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134784 ID=DN134784; Name=DN134784; organism=Citrus sinensis; type=EST; length=626bp
TACGGCCGGGTAGAGTTCATATAATATACGGGTTGTCGAAAGACCTCTCT
CTTCCGGGATTTAGGACCGGGGTTATCTATTCCTATAATGAGAGTGTTTT
GGCCGCTGCCAAAAAATTAACAAGATTTTGTTCTATTTCAGCCCCCACTC
AGAGGCTCCTAATTTCCATGCTCTCAGATACAAAGTTCATCCAGGAATAT
TTAGAGACCAATAAAAGGAGGATAAAGAAACTGTATGATTCATTTGTGGC
AGGTTTGAAATAATTAGGAATCAGGTGCTCAGAGAGCAGTGCTGGCTTAT
ATTGCTGGGCTGATATGAGTGGACTAATCCCCTCTTACAGTGAGAAAGGG
GAACTTGAATTATGGGATAAGCTCTTGAACATTGCTAAGATCAATGTTAC
TCCTGGCTCGGCCTGCCACTGTATAGAACCGGGATGGTTCCGGTGTTGTT
TTACTTCTTTAACCCACGAGGATATCCCTTTAGTCATTGAAAGGATCCAA
AAAGTTGCTGAAACTTGTAAATAAATGCTGAGAGGAATTTCATATGTAAG
ATTATTGCCATCATTAATGTTTTGGGAAAATTATGGGGACATGCACTGCT
TCTTAATTGAACAAAGGTCTAGTTCA
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