CX043968

Overview
NameCX043968
Unique NameCX043968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043968 vs. ExPASy Swiss-Prot
Match: CP3A7_HUMAN (Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12
Identity = 46/146 (31.51%), Postives = 73/146 (50.00%), Query Frame = -1
Query:  265 TPPDWQEKLRGEVLELFGQKNPAP-DGIGKLKPMSRVINEFLRRFPPAVNISRNVEREVRLGKSIFPANMELVIPILAIPHAPQIWGEDVDFFKPERFADGGAKXXXXXXXXXXXXXSGPRICGGLNFAATEAKIALSMILQRYRF 699
            T PD Q+K++ E+  +   K P   D + +L+ +  V+NE LR FP A+ + R  +++V +     P  + ++IP   + H P+ W E  + F PERF+                  SGPR C G+ FA    K+AL  +LQ + F
Sbjct:  323 THPDVQQKVQKEIDTVLPNKAPPTYDTVLQLEYLDMVVNETLRLFPVAMRLERVCKKDVEINGMFIPKGVVVMIPSYVLHHDPKYWREP-EKFLPERFSK--KNKDNIDPYIYTPFGSGPRNCIGMRFALVNMKLALVRVLQNFSF 465          
BLAST of CX043968 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12
Identity = 53/161 (32.92%), Postives = 78/161 (48.45%), Query Frame = -1
Query:  223 TPPDWQEKLRGEVLELFGQKNPAPDGIGKLKPMSRVINEFLRRFPPA--VNISRNVEREVRLGKSIFPANMELVIPILAIPHAPQIWGEDVDFFKPERFADGGAKXXXXXXXXXXXXXSGPRICGGLNFAATEAKIALSMILQRYRFNLSPSYVPSPVLVG 699
            T P+ Q+KL+ EV           D + KLK +  V+ E LR +P A  V+  + ++    LG  I  A   + +   ++ H P++WG+DV+ FKPER+  G                 GPRIC G+  A  E K+ L+ IL+ Y F  +P  V    LVG
Sbjct:  344 THPEIQKKLQEEVDRECPDPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEI-EAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESGDE--LFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFETTPETVIPLKLVG 501          
BLAST of CX043968 vs. ExPASy Swiss-Prot
Match: CP3A8_MACFA (Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3A8 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12
Identity = 46/146 (31.51%), Postives = 74/146 (50.68%), Query Frame = -1
Query:  265 TPPDWQEKLRGEVLELFGQKNPAP-DGIGKLKPMSRVINEFLRRFPPAVNISRNVEREVRLGKSIFPANMELVIPILAIPHAPQIWGEDVDFFKPERFADGGAKXXXXXXXXXXXXXSGPRICGGLNFAATEAKIALSMILQRYRF 699
            T PD Q+KL+ E+  +   K P   D + +++ +  V+NE LR FP A+ + R  +++V +     P  + ++IP  A+ H P+ W E  + F PERF+                  SGPR C G+ FA    K+A+  +LQ + F
Sbjct:  323 THPDVQQKLQEEIDTVLPNKAPPTYDTVLQMEYLDMVVNETLRIFPIAMRLERVCKKDVEINGIFIPKGVVVMIPSYALHHDPKYWPEP-EKFLPERFSK--KNNDNIDPYIYTPFGSGPRNCIGMRFALMNMKLAIIRVLQNFSF 465          
BLAST of CX043968 vs. ExPASy Swiss-Prot
Match: CP341_MOUSE (Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12
Identity = 46/146 (31.51%), Postives = 72/146 (49.32%), Query Frame = -1
Query:  265 TPPDWQEKLRGEVLELFGQKNPAP-DGIGKLKPMSRVINEFLRRFPPAVNISRNVEREVRLGKSIFPANMELVIPILAIPHAPQIWGEDVDFFKPERFADGGAKXXXXXXXXXXXXXSGPRICGGLNFAATEAKIALSMILQRYRF 699
            T PD Q+KL+ E+ E    K P   D + +++ +  V+NE LR +P    + R  +++V L     P    ++IP  A+ H PQ W E  + F+PERF+                   GPR C G+ FA    K+AL+ ++Q + F
Sbjct:  324 THPDIQKKLQEEIDETLPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERFCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWPEPEE-FQPERFSK--ENKGSIDPYLYMPFGIGPRNCIGMRFAFMTMKLALTKVMQNFSF 466          
BLAST of CX043968 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 44/146 (30.14%), Postives = 73/146 (50.00%), Query Frame = -1
Query:  265 TPPDWQEKLRGEVLELFGQKNPAP-DGIGKLKPMSRVINEFLRRFPPAVNISRNVEREVRLGKSIFPANMELVIPILAIPHAPQIWGEDVDFFKPERFADGGAKXXXXXXXXXXXXXSGPRICGGLNFAATEAKIALSMILQRYRF 699
            T P  Q+KL+ E+   F  K P   D + +++ +  V+NE LR FP A  + R  +++V +     P    +++P+  + + P++W E  + F+PERF+                  +GPR C G+ FA    K+AL  ILQ + F
Sbjct:  323 THPHVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELWPEPEE-FRPERFSKN--NKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSF 465          
BLAST of CX043968 vs. ExPASy Swiss-Prot
Match: C6A17_DROME (Probable cytochrome P450 6a17 OS=Drosophila melanogaster GN=Cyp6a17 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = -1
Query:  226 DWQEKLRGEVLELFGQKNP--APDGIGKLKPMSRVINEFLRRFPPAVNISRNVEREVRLG--KSIFPANMELVIPILAIPHAPQIWGEDVDFFKPERFADGGAKXXXXXXXXXXXXXSGPRICGGLNFAATEAKIALSMILQRYRFNLSP-SYVPSPVLV 690
            D Q+KLR E+  +FG+ N     +GI ++K + +V+ E LR++P   +++R  + +      K        +VIP L I + P I+ E  + FKPERF D   +              GPR C GL F   +  + L+ +++ Y+F++SP + +P  ++V
Sbjct:  325 DVQDKLREEIGNVFGKHNKEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRMTDTDFSPEDPKYFIAKGTIVVIPALGIHYDPDIYPEP-EIFKPERFTD--EEIAARPSCTWLPFGEGPRNCIGLRFGMMQTCVGLAYLIRGYKFSVSPETQIPMKIVV 481          
BLAST of CX043968 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 45/150 (30.00%), Postives = 78/150 (52.00%), Query Frame = -1
Query:  253 TPPDWQEKLRGEV-LELFGQKNPAPDGIGKLKPMSRVINEFLRRFPPAVNISRNVEREVRLGKSIFPANMELVIPILAIPHAPQIWGEDVDFFKPERFADGGAKXXXXXXXXXXXXXSGPRICGGLNFAATEAKIALSMILQRYRFNLSP 699
            T PD Q+KL+ E+ + L  +  P+ D + +++ +  V+NE LR +P    + R  +++V +     P    +++P+ A+ + PQ W E  + F+PERF+                  +GPR C G+ FA    K+AL+ +LQ   F+L P
Sbjct:  321 THPDVQKKLQEEIDIALPNKARPSYDKVMEMEYLDMVLNETLRLYPIGSRLERVCKQDVEMDGVFVPKGSIVMVPVFALHYDPQYWPEP-EKFRPERFSK--ENKGSIDPYIFLPFGNGPRNCIGMRFALMNMKLALTKVLQ--NFSLQP 465          
BLAST of CX043968 vs. ExPASy Swiss-Prot
Match: C356_FUNHE (Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=cyp3a56 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 55/178 (30.90%), Postives = 87/178 (48.88%), Query Frame = -1
Query:  175 TPPDWQEKLRGEVLELFGQKNPAP-DGIGKLKPMSRVINEFLRRFPPAVNISRNVEREVRLGKSIFPANMELVIPILAIPHAPQIWGEDVDFFKPERFADGGAKXXXXXXXXXXXXXSGPRICGGLNFAATEAKIALSMILQRYRFNL-SPSYVPSPV-LVGPFPPQHGLQVIFHPLS 699
            T P+  +KL+ E+   F  K P     + +++ +  VINE LR FP A  + R  +  V +   + P +M ++IP   +   P+IW E  + FKPERF+                  SGPR C G+ FA    K+A+  ILQ+Y F++   + VP  + + G   P+  +Q+   P S
Sbjct:  322 TNPEVMKKLQEEIDATFPNKAPVHYQPLMEMEYLDCVINESLRLFPIAARLERVAKAAVEINGIVIPKDMVVMIPTWPLHRDPEIWPEP-EAFKPERFSK--KNKDNIDPYIYMPFGSGPRNCIGMRFALVLIKLAVVEILQQYSFSVCKETEVPFEMDIQGLLAPKRPIQLKLVPRS 496          
BLAST of CX043968 vs. ExPASy Swiss-Prot
Match: C330_FUNHE (Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=cyp3a30 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 55/178 (30.90%), Postives = 87/178 (48.88%), Query Frame = -1
Query:  175 TPPDWQEKLRGEVLELFGQKNPAP-DGIGKLKPMSRVINEFLRRFPPAVNISRNVEREVRLGKSIFPANMELVIPILAIPHAPQIWGEDVDFFKPERFADGGAKXXXXXXXXXXXXXSGPRICGGLNFAATEAKIALSMILQRYRFNL-SPSYVPSPV-LVGPFPPQHGLQVIFHPLS 699
            T P+  +KL+ E+   F  K P     + +++ +  VINE LR FP A  + R  +  V +   + P +M ++IP   +   P+IW E  + FKPERF+                  SGPR C G+ FA    K+A+  ILQ+Y F++   + VP  + + G   P+  +Q+   P S
Sbjct:  322 TNPEVMKKLQEEIDATFPNKAPVHYQPLMEMEYLDCVINESLRLFPIAARLERVAKAAVEINGVVIPKDMVVMIPTWPLHRDPEIWPEP-EAFKPERFSK--KNKDNIDPYIYMPFGSGPRNCIGMRFALVLIKLAVVEILQQYSFSVCKETEVPFEMDIQGLLAPKRPIQLKLVPRS 496          
BLAST of CX043968 vs. ExPASy Swiss-Prot
Match: CP3A4_HUMAN (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11
Identity = 46/146 (31.51%), Postives = 73/146 (50.00%), Query Frame = -1
Query:  265 TPPDWQEKLRGEVLELFGQKNPAP-DGIGKLKPMSRVINEFLRRFPPAVNISRNVEREVRLGKSIFPANMELVIPILAIPHAPQIWGEDVDFFKPERFADGGAKXXXXXXXXXXXXXSGPRICGGLNFAATEAKIALSMILQRYRF 699
            T PD Q+KL+ E+  +   K P   D + +++ +  V+NE LR FP A+ + R  +++V +     P  + ++IP  A+   P+ W E  + F PERF+                  SGPR C G+ FA    K+AL  +LQ + F
Sbjct:  323 THPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP-EKFLPERFSK--KNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 465          
The following BLAST results are available for this feature:
BLAST of CX043968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
CP3A7_HUMAN3.429e-1231.51Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1... [more]
C13A7_CAEEL3.429e-1232.92Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]
CP3A8_MACFA4.479e-1231.51Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3... [more]
CP341_MOUSE4.479e-1231.51Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a P... [more]
CP3AS_BOVIN5.849e-1230.14Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
C6A17_DROME5.849e-1230.00Probable cytochrome P450 6a17 OS=Drosophila melano... [more]
CP3AV_MESAU9.977e-1230.00Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
C356_FUNHE9.977e-1230.90Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=c... [more]
C330_FUNHE9.977e-1230.90Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=c... [more]
CP3A4_HUMAN1.303e-1131.51Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14E11_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E11-J22-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043968 ID=CX043968; Name=CX043968; organism=Citrus sinensis; type=EST; length=699bp
TTTTTTTTTTTTTTTTTGGGACAATTGATACTGTTTTCCAAGTTCAACCC
TAAAAATTTCAAATTAAACATAAACAGAACAAATTTTTAATCTAATACAA
AAGGGTACAAAAACATGCAACACATGGAAGGGTTCAAAAAGAAAAAAGTT
CTATAGCTAGTTTCCCTGGGTGACACTTAATGGGTGAAATATTACTTGAA
GTCCATGTTGAGGGGGAAAGGGCCCAACTAAAACCGGGGAGGGCACATAA
CTTGGGGACAAATTGAACCTGTATCGTTGCAAAATCATTGAAAGCGCAAT
CTTTGCTTCTGTAGCTGCGAAATTCAAGCCCCCACAAATTCTTGGCCCCG
AACTAAAAGGAAAAAATGCTGCTGGGGGGTTGTTGCTAGCTTTAGCCCCC
CCATCTGCAAATCTCTCTGGCTTGAAAAAATCAACATCTTCCCCCCAAAT
TTGAGGGGCATGGGGAATTGCCAAAATTGGAATAACAAGTTCCATATTTG
CTGGAAAAATGGACTTCCCCAGTCTCACTTCCCTTTCAACATTCCTCGAA
ATGTTAACAGCTGGCGGAAACCGCCTTAAAAATTCATTTATAACCCTGCT
CATTGGTTTCAATTTTCCTATGCCATCTGGGGCCGGATTTTTCTGGCCAA
ATAACTCAAGCACTTCCCCCCTTAATTTCTCTTGCCAATCTGGGGGAGT
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