CX043963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043963 vs. ExPASy Swiss-Prot
Match: EF1B_DICDI (Elongation factor 1-beta OS=Dictyostelium discoideum GN=efa1B PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.911e-21 Identity = 51/87 (58.62%), Postives = 62/87 (71.26%), Query Frame = -2 Query: 180 VLLDVKPWDDETDMKKLEEAVRSVEMPGFFWGASKLVPVGYGIKKLQIMITIVDDLVFVDSLIEEPLPAEPCNEYIQSCDIVAFNKI 440 +LLDVKPWDDETDM +LE+ VRS+EM G WGASKLV VGYGIKKL I + + D V D L E+ + +Y+QS D+ AFNKI Sbjct: 133 ILLDVKPWDDETDMVELEKCVRSIEMDGLVWGASKLVAVGYGIKKLVINLVVEDLKVSTDELEEK---IKDFEDYVQSVDVAAFNKI 216
BLAST of CX043963 vs. ExPASy Swiss-Prot
Match: EF1B_SCHPO (Elongation factor 1-beta OS=Schizosaccharomyces pombe GN=tef5 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.142e-19 Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = -2 Query: 180 VLLDVKPWDDETDMKKLEEAVRSVEMPGFFWGASKLVPVGYGIKKLQIMITIVDDLVFVDSLIEEPLPAEPCNEYIQSCDIVAFNKI 440 V LDVKPWDDET M +LE+AVRS++M G WG SKLVPVG+G+ K QI + + DD V +++L EE E +Y+QS DI A +K+ Sbjct: 131 VTLDVKPWDDETPMDELEKAVRSIQMDGLVWGLSKLVPVGFGVNKFQINLVVEDDKVSLEALQEE---LEGFEDYVQSTDIAAMSKL 214
BLAST of CX043963 vs. ExPASy Swiss-Prot
Match: EF1D_DROME (Probable elongation factor 1-delta OS=Drosophila melanogaster GN=eEF1delta PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.545e-19 Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = -2 Query: 180 VLLDVKPWDDETDMKKLEEAVRSVEMPGFFWGASKLVPVGYGIKKLQIMITIVDDLVFVDSLIEEPLPAEPCNEYIQSCDIVAFNKI 440 ++LDVKPWDDETD+K +E +R + G WGASK VPV +GI+KL I + DD V +D L EE E +++QS DI AFNKI Sbjct: 173 IILDVKPWDDETDLKVMETEIRKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKVSIDWLTEE---IEKLEDFVQSVDIAAFNKI 256
BLAST of CX043963 vs. ExPASy Swiss-Prot
Match: EF1D_SHEEP (Elongation factor 1-delta OS=Ovis aries GN=EEF1D PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.154e-18 Identity = 49/88 (55.68%), Postives = 59/88 (67.05%), Query Frame = -2 Query: 180 VLLDVKPWDDETDMKKLEEAVRSVEMPGFFWGASKLVPVGYGIKKLQIMITIVDDLVFVDSLIEEPLP-AEPCNEYIQSCDIVAFNKI 440 +LLDVKPWDDETDM +LE VRSV++ G WG+SKLVPVGYGI+KLQI V+ PL + E++QS DI AFNKI Sbjct: 197 ILLDVKPWDDETDMAQLEACVRSVQLDGLVWGSSKLVPVGYGIRKLQIQCV-------VECRWGRPLERSHQVEEHVQSVDIAAFNKI 277
BLAST of CX043963 vs. ExPASy Swiss-Prot
Match: EF1B_CANAL (Elongation factor 1-beta OS=Candida albicans GN=EFB1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.492e-16 Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = -2 Query: 180 VLLDVKPWDDETDMKKLEEAVRSVEMPGFFWGASKLVPVGYGIKKLQIMITIVDDLVFVDSLIEEPLPAEPCNEYIQSCDIVAFNKI 440 V LDVKPWDDETD+ +L V+++EM G WGA + +PVG+GIKKLQI + + D LV +D L E +++QS DI A K+ Sbjct: 130 VTLDVKPWDDETDLDELLTNVKAIEMEGLTWGAHQWIPVGFGIKKLQINLVVEDALVSLDDL---QAAVEEDEDHVQSTDIAAMQKL 213
BLAST of CX043963 vs. ExPASy Swiss-Prot
Match: EF1B_YEAST (Elongation factor 1-beta OS=Saccharomyces cerevisiae GN=EFB1 PE=1 SV=4) HSP 1 Score: 83.5741 bits (205), Expect = 1.001e-15 Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = -2 Query: 180 VLLDVKPWDDETDMKKLEEAVRSVEMPGFFWGASKLVPVGYGIKKLQIMITIVDDLVFVDSLIEEPLPAEPCNEYIQSCDIVAFNKI 440 V LDVKPWDDET+++++ V+++EM G WGA + +P+G+GIKKLQI + DD V +D L + E +++QS DI A K+ Sbjct: 123 VTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLDDLQQS---IEEDEDHVQSTDIAAMQKL 206
BLAST of CX043963 vs. ExPASy Swiss-Prot
Match: EF1B_TRYCR (25 kDa elongation factor 1-beta OS=Trypanosoma cruzi PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.967e-15 Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = -2 Query: 180 VLLDVKPWDDETDMKKLEEAVRSVEMPGFFWGASKLVPVGYGIKKLQIMITIVDDLVFVDSLIEEPLPAEPCNEYIQSCDIVAFNKI 440 +L DVKPWDD D++ L + +V+ G WG KLVPV +G+KKLQ +I I DD V D L E + E + +QS DIVA+NKI Sbjct: 139 ILFDVKPWDDTVDLQALANKLHAVKRDGLLWGDHKLVPVAFGVKKLQQLIVIEDDKVLSDDLEELIMSFE---DEVQSMDIVAWNKI 222
BLAST of CX043963 vs. ExPASy Swiss-Prot
Match: EF1B_PIG (Elongation factor 1-beta OS=Sus scrofa GN=EEF1B PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.935e-12 Identity = 40/83 (48.19%), Postives = 48/83 (57.83%), Query Frame = -2 Query: 180 VKPWDDETDMKKLEEAVRSVEMPGFFWGASKLVPVGYGIKKLQIMITIVDDLVFVDSLIEEPLPAEPCNEYIQSCDIVAFNKI 428 VKPWDDE M KLEE V S++ G LVPVGYGIK DD V D ++EE + A +Y+QS D+ AFNKI Sbjct: 145 VKPWDDEXXMAKLEEXVXSIQADGLVXXXXXLVPVGYGIKXXXXXXXXXDDKVGTD-MLEEQITA--FEDYVQSMDVAAFNKI 224 The following BLAST results are available for this feature:
BLAST of CX043963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043963 ID=CX043963; Name=CX043963; organism=Citrus sinensis; type=EST; length=654bpback to top |