CX043956

Overview
NameCX043956
Unique NameCX043956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2J5_MOUSE (Cytochrome P450 2J5 OS=Mus musculus GN=Cyp2j5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13
Identity = 47/161 (29.19%), Postives = 79/161 (49.07%), Query Frame = -1
Query:  302 AVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 781
            A+ +++  P     ++ E D +   K +   +  +D +SMP+T  V++E  R+ NI+     R +T D    G+ +PKG  +  +  A+H D   +     FNP  +  N G       F PF  G R C G +LA+ EL +F   L+ +F++ P   +KL
Sbjct:  322 ALLYMSSYPEIQENVQAEIDRVIGHKRQ---VSLSDRESMPYTNAVIHEVQRMGNIVPLNSSREVTVDTKFNGFHLPKGTMILTNLTALHRDPKEWATPEVFNPEHFLEN-GQFKKRESFLPFSMGKRACLGEQLAKSELFIFFSALMQKFTFKPPINEKL 478          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2CP_MESAU (Cytochrome P450 2C25 OS=Mesocricetus auratus GN=CYP2C25 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13
Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = -1
Query:  332 AVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 781
            A+  L + P   A+++EE D++  +  K       D   MP+T  +++E  R  ++I      A+T DI  + Y IPKG  V  S  +V  D+  F +   F+P  + + +G     + F PF  G R+C G  LAR+EL +FL  ++  F
Sbjct:  309 ALLLLLKHPHVTAKVQEEIDQVVGRHRKPC---MQDRSHMPYTDAMIHEVQRFIDLIPISLPHAVTCDIKFRDYFIPKGTTVITSLSSVLHDNKEFPNPEVFDPGHFLDKNGNFKKSDYFMPFSAGKRICAGEGLARMELFLFLTTILQNF 456          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2CF_RABIT (Cytochrome P450 2C15 (Fragment) OS=Oryctolagus cuniculus GN=CYP2C15 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13
Identity = 46/154 (29.87%), Postives = 79/154 (51.30%), Query Frame = -1
Query:  332 MTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 790
            +++++  L + P   A+++EE + +  +   + P    D   MP+T  V++E  R  ++I      A+T DI  + Y IPKG  +  S  +V  D   F + + F+P  + + SG     + F PF  G R+C G  LAR+EL +FL  ++  F
Sbjct:  194 LSISLLLLLKHPEVAAKVQEEIERVIGRH--RSPC-MQDRSRMPYTDAVIHEIQRYIDLIPINLPHAVTRDIKFRNYFIPKGMNIITSLTSVLHDEKEFPNPKVFDPGHFLDESGNFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNF 344          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2A1_RAT (Cytochrome P450 2A1 OS=Rattus norvegicus GN=Cyp2a1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13
Identity = 40/133 (30.08%), Postives = 67/133 (50.38%), Query Frame = -1
Query:  332 HDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 727
            H+EI     +    ++ D+  MP+TQ V+NE  R +N+   G+ RR + +   +G+ +PKG  VF    ++  D   F   + F+P  + ++ G       F PF  G R C G  LA++EL + L  ++  F
Sbjct:  326 HEEIEQVIGRNRQPQYEDHMKMPYTQAVINEIQRFSNLAPLGIPRRIIKNTTFRGFFLPKGTDVFPILGSLMTDPKFFPSPKDFDPQNFLDDKGQLKKNAAFLPFSTGKRFCLGDGLAKMELFLLLTTILQNF 458          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13
Identity = 47/157 (29.94%), Postives = 80/157 (50.96%), Query Frame = -1
Query:  326 MTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRR-AMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNV-FTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW 790
            MT A+  L   P  + +L+ E   IR K    + +  +D + + + + V+ ET R++ I+  +  R A  D+ I GY +P+   +  +  AVH+    +KD  +FNP R+ +N      +N    PFG G R+CPG  +    + + L +L+ RF W
Sbjct:  306 MTWAMTHLLANPRVMKKLQAE---IREKIKNIDEITDDDVEQLDYFKLVLKETFRISPIVPVLVPRVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDW 459          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2AC_MOUSE (Cytochrome P450 2A12 OS=Mus musculus GN=Cyp2a12 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.514e-13
Identity = 39/133 (29.32%), Postives = 64/133 (48.12%), Query Frame = -1
Query:  332 HDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 727
            H+EI     +    ++ D+  MP+TQ V+NE  R +N    G+ RR   + + +G+ +PK   VF    ++  D   F   + FNP  + ++ G    +  F PF  G R C G  LA++EL      ++  F
Sbjct:  326 HEEIDRVIGRNRQPQYEDHMKMPYTQAVINEIQRFSNFAPLGIPRRITKNTSFRGFFLPKATEVFPILGSLMTDPKFFSSPKDFNPQHFLDDKGQLKKIPAFLPFSTGKRFCLGDSLAKMELFFLFTTILQNF 458          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.514e-13
Identity = 47/153 (30.72%), Postives = 77/153 (50.33%), Query Frame = -1
Query:  326 AVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTD-INIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW 781
            A+  L   P  L + + E DE   K  K   ++ +D   +P+ Q VV+ET R+  +   +  R+ TD + I GY +P+   V  +  A+H D + +++   FNP R+ +  G+   V    PFG G R CPG  L +  +++ L  L+  F W
Sbjct:  312 AMANLLRNPEVLEKARSEIDE---KIGKDRLIDESDIAVLPYLQNVVSETFRLFPVAPFLIPRSPTDDMKIGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRYNDGCGSDYYVYKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEW 461          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP3A5_HUMAN (Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.508e-13
Identity = 49/183 (26.78%), Postives = 87/183 (47.54%), Query Frame = -1
Query:  251 IMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFPTTR--TQKRYPIIVQ 793
            +++  +  L   P    +L++E D +   K+   P  ++    M +   VVNETLR+  +   + R    D+ I G  IPKG  V     A+H D  ++ +   F P R+     +  P  ++TPFG GPR C G   A + + + L  ++  FS+ P ++ ++     T+   Q   PI+++
Sbjct:  313 VLSFTLYELATHPDVQQKLQKEIDAVLPNKA---PPTYDAVVQMEYLDMVVNETLRLFPVAIRLERTCKKDVEINGVFIPKGSMVVIPTYALHHDPKYWTEPEEFRPERFSKKKDSIDPY-IYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLDTQGLLQPEKPIVLK 491          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP3A1_RAT (Cytochrome P450 3A1 OS=Rattus norvegicus GN=Cyp3a1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.508e-13
Identity = 48/164 (29.27%), Postives = 80/164 (48.78%), Query Frame = -1
Query:  302 MTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-QNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 790
            ++  +  L   P    +L+EE D     K+   P  ++    M +   V+NETLR+  I + + R    D+ I G  +PKG  V     A+H D  H+ +   F P R+ + N G+  P  V+ PFG GPR C G   A + + + L  ++  FS+ P ++ ++
Sbjct:  315 LSFVLHSLATHPDTQKKLQEEIDRALPNKA---PPTYDTVMEMEYLDMVLNETLRLYPIGNRLERVCKKDVEINGVFMPKGSVVMIPSYALHRDPQHWPEPEEFRPERFSKENKGSIDPY-VYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQI 474          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2F1_HUMAN (Cytochrome P450 2F1 OS=Homo sapiens GN=CYP2F1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 8.508e-13
Identity = 49/151 (32.45%), Postives = 76/151 (50.33%), Query Frame = -1
Query:  320 LTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVP 769
            L + P   A+++EE D +   +++   L+  D  +MP+T  V++E  R A+II   +  R   D   +G+ IPKG  V      VH D   F   + FNP  + + + +      F PF  G RLC G  LAR+EL ++L  ++  FS  P
Sbjct:  314 LMKYPKVQARVQEEIDLV-VGRARLPALK--DRAAMPYTDAVIHEVQRFADIIPMNLPHRVTRDTAFRGFLIPKGTDVITLLNTVHYDPSQFLTPQEFNPEHFLDANQSFKKSPAFMPFSAGRRLCLGESLARMELFLYLTAILQSFSLQP 461          
The following BLAST results are available for this feature:
BLAST of CX043956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
CP2J5_MOUSE4.988e-1329.19Cytochrome P450 2J5 OS=Mus musculus GN=Cyp2j5 PE=2... [more]
CP2CP_MESAU4.988e-1331.13Cytochrome P450 2C25 OS=Mesocricetus auratus GN=CY... [more]
CP2CF_RABIT4.988e-1329.87Cytochrome P450 2C15 (Fragment) OS=Oryctolagus cun... [more]
CP2A1_RAT4.988e-1330.08Cytochrome P450 2A1 OS=Rattus norvegicus GN=Cyp2a1... [more]
C71B1_THLAR4.988e-1329.94Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
CP2AC_MOUSE6.514e-1329.32Cytochrome P450 2A12 OS=Mus musculus GN=Cyp2a12 PE... [more]
C81F1_ARATH6.514e-1330.72Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
CP3A5_HUMAN8.508e-1326.78Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1... [more]
CP3A1_RAT8.508e-1329.27Cytochrome P450 3A1 OS=Rattus norvegicus GN=Cyp3a1... [more]
CP2F1_HUMAN8.508e-1332.45Cytochrome P450 2F1 OS=Homo sapiens GN=CYP2F1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14E05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E05-J10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043956 ID=CX043956; Name=CX043956; organism=Citrus sinensis; type=EST; length=793bp
TTTTTTTTTTTTTTTTTCACAAAAAGGAAATAAAATGATTACTATTAATC
ATTACTACAGCAGCTTGATTAAAACATATGAACATGATAATTTACATAAA
CTATTCTGCTAACATAAAATTTATTAAATTTGACATAAATAGTTGATTAC
ATTAGATGATACATCATCTCCTCTAGCATTCTCTTACTCCATCCTTCCTT
GCTTGCTTCTCTCTTTATTCTTTACATGGCTTTTAATTCTCATTTCGACG
CTGCACAATGATGGGGTACCTCTTCTGCGTTCTTGTTGTTGGAAAGAATA
CCAACTTATCTTGCTCAGCTGGTACCCAGCTGAAACGAGTAACTAAGTGG
TGAAGAAAAACAGAGAGCTCAACCCTCGCAAGTTCATATCCAGGGCACAG
CCGTGGCCCACCGCCGAACGGAGTGAATACATTTACTGGACTCGTTGCTC
CTGAATTATTCTGCCATCTCCATGGGTTGAAAGAGCGAGCATCTTTGAAA
TGGTCATGGTCTAAATGTACAGCCCTGAATGATGCAAAAACTCTCCACCC
CTTTGGTATAGTGTAACCTTTAATGTTGATATCTGTCATTGCTCTCCTGA
AAACCCCACTGATTATGTTGGCCACTCTCAGAGTTTCATTGACAACACAT
TGAGTGAATGGCATTGACTTATAATCATTCCATTCGAGAGGCTCTTGCTT
GCTCTTCTTTGCCCTTATCTCATCATGCTCCTCCTTTAGTTGAGCCAAAG
CTAGAGGAGTCTCAGTGAGGAACTTAACAGCAAGAGTCATGAT
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