CX043953

Overview
NameCX043953
Unique NameCX043953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length766
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.214e-13
Identity = 58/193 (30.05%), Postives = 84/193 (43.52%), Query Frame = 3
Query:  138 VKGLVDAGIVNIPRIFIRPPEEL-----VEELTSHQTNFQVPVIDL-------DGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQT--RNVRFNSNFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRD---AAREYIKNVTKLAETLFELLSLALGLK 665
            V+ L  +GI +IP+ +IRP EEL     V E        QVP IDL       + VR    E   ++++ AA  WG   +VNHGI  +++  +      F  L +E +KE Y  DQ   +   + S    + S    W D            D   +P+   D   A  EY   +  LA  +  +LSL LGL+
Sbjct:    9 VESLSSSGIQSIPKEYIRPQEELTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPME-EKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLE 200          

HSP 2 Score: 30.8018 bits (68), Expect = 3.214e-13
Identity = 14/28 (50.00%), Postives = 18/28 (64.29%), Query Frame = 1
Query:  682 EIGCPKEYILL--CQYYPPCPQPDLTLG 759
            E+G  +E +L     YYP CPQP+L LG
Sbjct:  207 EVGGMEELLLQKKINYYPKCPQPELALG 234          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 4.172e-13
Identity = 50/175 (28.57%), Postives = 86/175 (49.14%), Query Frame = 3
Query:  183 FIRPPEELVEELTSHQTNFQVPVIDLDGVRGNNLE---EIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVR--FNSNFDLHYSRTANWRDTLTISTLASTNLDPNEY---PEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHFTR 683
            F+R  +E   ++  ++ + ++PVI L G+  ++++   +I  ++  A E WG FQVV+HGI ++++ EM     +F  L  E K  F   D T   +  F  +  L      +WR+ +T  +      D + +   PE  R     Y   +  LA  L E+LS A+GL+ E  T+
Sbjct:   19 FVRDEDER-PKIAYNKFSDEIPVISLAGIDDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRF---DMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTK 189          

HSP 2 Score: 31.5722 bits (70), Expect = 4.172e-13
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  709 LLCQYYPPCPQPDLTLG 759
            ++  YYP CPQP+LTLG
Sbjct:  198 VIVNYYPKCPQPNLTLG 214          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 4.384e-12
Identity = 52/191 (27.23%), Postives = 83/191 (43.46%), Query Frame = 3
Query:  156 AGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVR---GNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNS----------NFDLHYSRTANWRDTLTISTLASTNLDPNEY---PEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHFT 680
            AG   +   F+R  +E  +   +  +N ++PVI L          ++EI  ++  A E WG FQVVNHG+  N++ EM             L +EF+      NVRF+           +  L      +WR+ +T  +      D + +   PE  R   +EY + +  LA  L E+LS A+ L  +  T
Sbjct:   10 AGEKTLQSSFVRDEDERPKVAYNDFSN-EIPVISLTKESMKLAAVVDEICRKIVEACEDWGIFQVVNHGVDSNLISEM-----------TRLAREFFALPPEENVRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALT 188          

HSP 2 Score: 31.5722 bits (70), Expect = 4.384e-12
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  709 LLCQYYPPCPQPDLTLG 759
            ++  +YP CPQPDLTLG
Sbjct:  198 VVVNFYPQCPQPDLTLG 214          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 5.687e-12
Identity = 44/147 (29.93%), Postives = 69/147 (46.94%), Query Frame = 3
Query:  243 VPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTLTISTLASTNLDPNEYPEV----CRDAAREYIKNVTKLAETLFELLSLALGLKAE 671
            VP+I L G+ G    +I D+V AA E WG FQV++HG+  +++ +M     +F  L  E K   Y     +   F  +  L      +WR+ +T  +      D   +PE     C    R Y + +  L+  L  +LS A+GL+ E
Sbjct:   43 VPLISLHGIDGARRAQIRDRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLR-YDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVER-YSERLMGLSCNLMGVLSEAMGLETE 187          

HSP 2 Score: 31.187 bits (69), Expect = 5.687e-12
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  709 LLCQYYPPCPQPDLTLG 759
            ++  +YP CPQPDLTLG
Sbjct:  200 VVVNFYPRCPQPDLTLG 216          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.252e-11
Identity = 42/143 (29.37%), Postives = 75/143 (52.45%), Query Frame = 3
Query:  246 PVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISK--FNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTLTISTLASTNLDP-NEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLK 665
            P+I+L+ + G+   + ++ ++ A E WGFF++VNHGIP  V+ + +E ++K  + +   +  KE         V+     DL      +W  T  +  L ++N+    +  E  R+  R++ K + KLAE L +LL   LGL+
Sbjct:    5 PIINLENLNGDERAKTMEMIKDACENWGFFELVNHGIPHEVM-DTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVT-DL------DWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLE 139          

HSP 2 Score: 26.9498 bits (58), Expect = 1.252e-11
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  724 YPPCPQPDLTLG 759
            YPPCP+PDL  G
Sbjct:  162 YPPCPKPDLIKG 173          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.252e-11
Identity = 41/146 (28.08%), Postives = 73/146 (50.00%), Query Frame = 3
Query:  246 PVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISK--FNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTLTISTLASTNLDP-NEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEH 674
            P+I+L+ + G      ++++  A E WGFF++VNHGIP  V+ + +E ++K  + +   +  KE   +     V              +W  T  +  L S+N+    +  +V R+  R++ K + KLAE L +LL   LGL+  +
Sbjct:    5 PIINLEKLNGAERVATMEKINDACENWGFFELVNHGIPHEVM-DTVEKLTKGHYKKCMEQRFKELVAKKGLEGVEVEVT-------DMDWESTFFLRHLPSSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSY 142          

HSP 2 Score: 26.9498 bits (58), Expect = 1.252e-11
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  724 YPPCPQPDLTLG 759
            YPPCP+PDL  G
Sbjct:  162 YPPCPKPDLIKG 173          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 1.252e-11
Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = 3
Query:  246 PVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIP---LNVLEEMIEGISK------FNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLK 665
            P+I+L+ + G+     ++ ++ A E WGFF++VNHGIP   ++ +E+M +G  K      F EL V  K     + +  ++ + S F L +  T+N      IS +   +    EY EV RD    + K + KLAE L +LL   LGL+
Sbjct:    5 PIINLEKLNGDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKEL-VASKGLEAVQAEVTDLDWESTFFLRHLPTSN------ISQVPDLD---EEYREVMRD----FAKRLEKLAEELLDLLCENLGLE 139          

HSP 2 Score: 26.9498 bits (58), Expect = 1.252e-11
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  724 YPPCPQPDLTLG 759
            YPPCP+PDL  G
Sbjct:  162 YPPCPKPDLIKG 173          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.623e-11
Identity = 41/144 (28.47%), Postives = 73/144 (50.69%), Query Frame = 3
Query:  246 PVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNS-NFDLHYSRTANWRDTLTISTLASTNLDPNEYPEV---CRDAAREYIKNVTKLAETLFELLSLALGLK 665
            PV+D+D + G      ++++  A E WGFF++VNHGI      E+++ + K N+   +   E   ++        +   ++HY    +W  T  +  L S+N+  +E P++    R   +E+   + KLAE L +LL   LGL+
Sbjct:    5 PVVDMDLINGEERAATLEKINDACENWGFFELVNHGIS----TELLDTVEKMNKDHYKKTMEQRFKEMVAAKGLEAVQSEIHY---LDWESTFFLRHLPSSNI--SEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLE 139          

HSP 2 Score: 26.9498 bits (58), Expect = 1.623e-11
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  724 YPPCPQPDLTLG 759
            YPPCP+PDL  G
Sbjct:  162 YPPCPKPDLIKG 173          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.625e-11
Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 3
Query:  246 PVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIP---LNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTLTISTLASTNL-DPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLK 665
            P+I LD V G      ++ ++ A E WGFF++VNHGIP   ++ +E+M +G   + +   +  KE         V+             +W  T  +  L  +N+ +  +  E  R+  R++ K + KLAE L +LL   LGL+
Sbjct:    5 PIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKG--HYKKCMEQRFKELVASKALEGVQAEVT-------DMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLE 139          

HSP 2 Score: 26.9498 bits (58), Expect = 1.625e-11
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  724 YPPCPQPDLTLG 759
            YPPCP+PDL  G
Sbjct:  162 YPPCPKPDLIKG 173          
BLAST of CX043953 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.109e-11
Identity = 46/149 (30.87%), Postives = 78/149 (52.35%), Query Frame = 3
Query:  246 PVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIP---LNVLEEMIEGISK------FNELDVELKKEFYTRDQTRNVRFNSNFDLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLK 665
            P+I+L+ + G+  +  ++ ++ A E WGFF++VNHGIP   ++ +E++ +G  K      F EL V  K     + +  ++ + S F L +         L +S ++      +EY EV RD    + K + KLAE L +LL   LGL+
Sbjct:    5 PIINLEKLNGSERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKEL-VASKGLEAVQAEVTDLDWESTFFLRH---------LPVSNISEVPDLDDEYREVMRD----FAKRLEKLAEELLDLLCENLGLE 139          

HSP 2 Score: 26.9498 bits (58), Expect = 2.109e-11
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  724 YPPCPQPDLTLG 759
            YPPCP+PDL  G
Sbjct:  162 YPPCPKPDLIKG 173          
The following BLAST results are available for this feature:
BLAST of CX043953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
LDOX_VITVI3.214e-1330.05Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
FL3H_PETCR4.172e-1328.57Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_VITVI4.384e-1227.23Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FL3H_HORVU5.687e-1229.93Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
ACCO4_SOLLC1.252e-1129.371-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO2_SOLLC1.252e-1128.081-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_SOLLC1.252e-1132.891-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO2_MALDO1.623e-1128.471-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_PETHY1.625e-1129.171-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO3_PETHY2.109e-1130.871-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_14E03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E03-J6-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043953 ID=CX043953; Name=CX043953; organism=Citrus sinensis; type=EST; length=766bp
GTGCAATGGTGTGATCTCTATCAAGCAATAAAAAACAGACGATGGATATC
TCAGATGCCAGTAGAACGACCACGCAAACTGTAACGGACTACGACAGAGC
TAAAGAGGTTCAGGCTTTTGATGATACAAAAGCCGGTGTCAAAGGATTAG
TGGATGCTGGAATTGTGAACATTCCGAGGATATTCATTCGACCACCTGAG
GAGCTTGTCGAGGAGTTGACCAGTCATCAGACCAATTTTCAAGTACCGGT
TATCGATCTTGATGGCGTCAGAGGCAATAACCTTGAGGAGATTGTTGATC
AAGTTCGGGCTGCAGCAGAGACATGGGGCTTCTTTCAAGTGGTGAATCAC
GGTATTCCCTTAAATGTGTTGGAAGAGATGATTGAAGGGATAAGCAAGTT
TAATGAACTAGATGTTGAGTTGAAGAAAGAGTTTTATACACGTGACCAGA
CAAGAAATGTCAGATTCAACAGCAACTTTGATCTGCATTACTCACGAACA
GCTAATTGGCGGGACACGTTGACAATTTCTACCTTAGCTTCCACCAATTT
AGACCCCAACGAATACCCAGAAGTTTGCAGAGATGCTGCGAGAGAGTACA
TTAAAAATGTCACAAAATTGGCTGAAACTCTGTTTGAATTATTATCACTG
GCTCTTGGGCTGAAGGCTGAACATTTTACTAGAGATTGGATGCCCTAAAG
AATACATCCTTCTCTGCCAATACTATCCACCTTGCCCTCAGCCAGATTTG
ACATTGGGAGCTACCG
back to top