CX043952

Overview
NameCX043952
Unique NameCX043952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.107e-23
Identity = 62/172 (36.05%), Postives = 87/172 (50.58%), Query Frame = -3
Query:  176 REYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDFRASEYFSKRF 691
            ++Y + ++ L+  + ELL L+LG+  ++        + I+   +YPPC  PDLTLG   H DPS LTIL QD + GLQVF DNQW  ++P     VVNIGD    +SN  FKS  HR V +    R S+  F      ++ K    I E       P +      E+  K +
Sbjct:  186 QDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILEKMKTRKYPDFTWSMFLEFTQKHY 357          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.446e-23
Identity = 64/203 (31.53%), Postives = 110/203 (54.19%), Query Frame = -3
Query:  173 DTLTISTLASTNLDPNEYPEV---CRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEI-GCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDFRASEYFSKRFS 769
            D + +ST   ++++   +P+     R+   EY ++V  L+E + E LS  LGL  E + E+ GC   Y++   +YPP P  D   G   H+D + LT+++ ++I GLQVF D+ W+ V+ I   ++VNIGD + ++SN K+K+V H+        R+S P      +       GP+ ELTS ++PP ++     +Y   + +
Sbjct:   88 DQIYLSTWPPSSVNYRYWPKSPPDYREVNEEYARHVKTLSEKIMEWLSEGLGLGREAIKEVNGC--WYVMNINHYPPYPHSDSFNGLEPHTDINGLTLIITNEIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLV---SPTYDMVVGPLPELTSEDDPPKFKPIAYKDYVHNKIT 285          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.446e-23
Identity = 66/201 (32.84%), Postives = 108/201 (53.73%), Query Frame = -3
Query:  191 NWRDTLTISTLASTNL-DPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKE---YILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQD-QIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDFRASEY 778
            +W  T  +  L  +N+ +  +  +  R+  R++ K + KLAE L +LL   LGL+  +L +I    +   +      YPPCP+PDL  G   H+D   + +L QD ++ GLQ+  D QW+ V P+   +VVN+GD L++I+N K+KSV HRV+    G R+S+  F+   +  +      + E  + E+  IY  F   +Y
Sbjct:   85 DWESTFFLRHLPVSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSLASFYNPGSDAVIFPAPTLVEKEAEESKAIYPKFVFDDY 285          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 1.889e-23
Identity = 61/191 (31.94%), Postives = 92/191 (48.17%), Query Frame = -3
Query:  212 WRDTLTISTLASTNLDPNEYPEV---CRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYR 775
            WRD L ++     +   NE+P+     RD   ++      + + L  LL   +G++A++          IL   +YP CP PD  LG   H D + +T+LL   + GL+V +   W+ V P     VVN G  L++++N   KS++HR + +    R SV  F M     +    GP KE  S ENPP YR
Sbjct:  119 WRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLPGAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNSALARTSVATFIMPTQECL---IGPAKEFLSKENPPCYR 306          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.467e-23
Identity = 62/167 (37.13%), Postives = 91/167 (54.49%), Query Frame = -3
Query:  296 NWRDTLTISTLASTNLDPNEYPEV----CRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHD--NQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCF 778
            +WR+ +T  +      D   +PE     C    R Y + +  L+  L  +LS A+GL+ E L +     +  ++  +YP CPQPDLTLG   H+DP  +T+LLQD +GGLQ   D    W+ VQPI G  VVN+GD    +SN +FK+  H+ V +    R+S+  F
Sbjct:  129 DWREIVTYFSYPVKARDYGRWPEKPAGWCAVVER-YSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATF 294          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.467e-23
Identity = 67/194 (34.54%), Postives = 105/194 (54.12%), Query Frame = -3
Query:  245 DLHYSRTANWRDTLTISTLASTNL-DPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEI-----GCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQ-IGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFF-MGHNAEIPKSYGPIKE 802
            D++ +   +W  T  +  L  +N+ D  +  +  R   + +   +  LAE L +LL   LGL+  +L +      G P  +      YPPCP+PDL  G   H+D   + +L QD  +GGLQ+  D +WV V P+   +VVN+GD L++I+N ++KSV HRVVA   G R+S+  F+  G +A I  +   +KE
Sbjct:   82 DVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPT-FGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVMHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKE 274          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.207e-23
Identity = 67/196 (34.18%), Postives = 104/196 (53.06%), Query Frame = -3
Query:  215 WRDTLTISTLASTNLDPNEYPEVCRD---AAREYIKNVTKLAETLFELLSLALGLKAEHL-LEIGCPKEYILLCQ--YYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKS---YGPIKELTSAENPPIY 775
            W D            D + +P+   D   A  EY K + +LA  + ++LSL LGL    L  E+G  +E +L  +  YYP CPQP+L LG   H+D S LT +L + + GLQ+F++ +WV  + +   +V++IGD L+I+SN K+KS+ HR + +    R+S   F      E PK      P+ E  S + P ++
Sbjct:  143 WEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEILSNGKYKSILHRGMVNKEKVRISWAVF-----CEPPKEKIILKPLPETVSEDEPAMF 333          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.207e-23
Identity = 67/194 (34.54%), Postives = 106/194 (54.64%), Query Frame = -3
Query:  245 DLHYSRTANWRDTLTISTLASTNL-DPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEI-----GCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQD-QIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFF-MGHNAEIPKSYGPIKE 802
            D++ +   +W  T  +  L  +N+ D  +  +  R   + +   +  LAE L +LL   LGL+  +L +      G P  +      YPPCP+PDL  G   H+D   + +L QD ++GGLQ+  D +WV V P+   +VVN+GD L++I+N ++KSV HRVVA   G R+S+  F+  G +A I  +   +KE
Sbjct:   82 DVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPT-FGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVIHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKE 274          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.177e-23
Identity = 60/160 (37.50%), Postives = 83/160 (51.88%), Query Frame = -3
Query:  206 YIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDF 685
            Y   +++L+  + E+L  +LG+   H        + I+   YYPPC +P  TLG   H DP+ LTIL QD +GGLQV  + +W  ++P     VVNIGD    +SN ++KS  HR V +   PR S+  F      E+ K   P   L  A NP  Y DF
Sbjct:  167 YCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLC---PEMDKVVAPPGTLVDAANPRAYPDF 323          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.177e-23
Identity = 64/203 (31.53%), Postives = 107/203 (52.71%), Query Frame = -3
Query:  191 NWRDTLTISTLASTNLDPNEYPEV---CRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKE---YILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQD-QIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDFRASEY 778
            +W  T  +  L  +N+  +E P++    R+  +E+   + KLAE L +LL   LGL+  +L +         +      YPPCP P+L  G   H+D   L +L QD ++ GLQ+  D QW+ V P+   +V+N+GD L++I+N K++SV+HRV+A   G R+S+  F+   +  +      + E  + E   +Y  F   +Y
Sbjct:   85 DWESTFYLRHLPKSNI--SEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFVFEDY 285          
The following BLAST results are available for this feature:
BLAST of CX043952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GAOX2_ARATH1.107e-2336.05Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
FLS_MATIN1.446e-2331.53Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
ACCO_TOBAC1.446e-2332.841-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
IDS3_HORVU1.889e-2331.942'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
FL3H_HORVU2.467e-2337.13Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
ACCO1_ORYSI2.467e-2334.541-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
LDOX_MALDO4.207e-2334.18Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
ACCO1_ORYSJ4.207e-2334.541-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
GAO1B_WHEAT7.177e-2337.50Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
ACCO_PRUMU7.177e-2331.531-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14E03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E03-J6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043952 ID=CX043952; Name=CX043952; organism=Citrus sinensis; type=EST; length=810bp
TTTTTTTTTTTTTTTTTAGTTAAAACATATTTTTTTCGGAATTATTGGGA
AAGAGTTCACAACAGGACTCCGCAATTTGTAAATTGTTGTTACCAAATAC
GAGTAATTTATACAAATATTGCCAGCTTCATAGTTTGAGCTGATGGAGGG
GAGAATTGTCATCAAGCACCGTAGAAAATCGTTTGCTAAAATATTCACTT
GCACGAAAATCTCTGTAAATAGGAGGATTTTCTGCGGATGTCAACTCTTT
GATCGGCCCATAAGACTTTGGGATTTCTGCATTATGTCCCATGAAAAAGC
ATGGCACGGAAACCCTTGGACCGACATGACTGGCGACTACTCTGTGTTTA
ACACTCTTGAACTTGTCGTTTGATATAATCTGGAGGAAGTCCCCTATGTT
TACCACTAAGCCTCCCACAATGGGTTGAACACCAACCCATTGATTGTCAT
GAAAGACTTGAAGGCCGCCGATTTGGTCTTGCAGAAGAATGGTAAGAAAT
GAAGGGTCTGAATGCCCGGTAGCTCCCAATGTCAAATCTGGCTGAGGGCA
AGGTGGATAGTATTGGCAGAGAAGGATGTATTCTTTAGGGCATCCAATCT
CTAGTAAATGTTCAGCCTTCAGCCCAAGAGCCAGTGATAATAATTCAAAC
AGAGTTTCAGCCAATTTTGTGACATTTTTAATGTACTCTCTCGCAGCATC
TCTGCAAACTTCTGGGTATTCGTTGGGGTCTAAATTGGTGGAAGCTAAGG
TAGAAATTGTCAACGTGTCCCGCCAATTAGCTGTTCGTGAGTAATGCAGA
TCAAAGTTGC
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