CX043948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.030e-29 Identity = 78/207 (37.68%), Postives = 113/207 (54.59%), Query Frame = -3 Query: 272 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIY---LQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAW 883 +LA + F F G A E V+ L V EALAVN L LH + + + +L +++L+P ++T+VEQE+N N FL RF + +Y +F+S++ + K + L RE+ N++ CEG R ERHEPL KWR+R AGF+P L S LL +S E Y++EE +G L LGW ++PLI + AW Sbjct: 392 KLAEMCGVPFEFHGAALCCTE-VEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYS-EKYTLEERDGALYLGWKNQPLITSCAW 596
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCL28_ARATH (Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.316e-28 Identity = 78/218 (35.78%), Postives = 113/218 (51.83%), Query Frame = -3 Query: 272 ARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLE---ACPLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEG---YSVEETE----------GCLTLGWHSRPLIAASAW 877 A ++N++F F V RLEDV+ WML V E++AVN ++Q+HK L + + LG IR+ NP + + EQE+ HN + R +L YYS MFD++ A + E+ REI N+V CEGS R ERH WR L GFR L + Q+ MLL ++ ++ ++VE ++ G +TL W +PL SAW Sbjct: 439 AEAMNLQFEFHPVV-DRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYD--GTGAAIRDFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.743e-26 Identity = 71/207 (34.30%), Postives = 104/207 (50.24%), Query Frame = -3 Query: 272 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLE-ACPLQPEKAL--AEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAW 883 +LA + F F+ + S+ V P L P E L VN QLH + + + +L +++LNPK++TVVEQ+ N N F RF A YYS +F+SL+ P + ++ + L R+I N+V CEG R+ER+E KWR R+ AGF P + + L+ Y ++E G L W + LI ASAW Sbjct: 387 QLAEDNGVSFKFKAMP-SKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAW 592
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCR_IPONI (Protein SCARECROW OS=Ipomoea nil GN=SCR PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.778e-25 Identity = 76/212 (35.85%), Postives = 116/212 (54.72%), Query Frame = -3 Query: 260 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQ-LHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEAC---PLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAWHAVP 883 + A+ + + F F VA ++ ++ P L V+ +EA+AV+ + L+ + GSD L ++ L PK++TVVEQ+ +H FL RF A++YYS +FDSL AC + A+ + L REI NV+ G +R WR + +GFR + L NA QA++LL +F ++GY++ E G L LGW L+ ASAW P Sbjct: 579 DFAQKLGLPFEFFPVA-DKVGNLDPQRLNVNKREAVAVHWLQHSLYDVTGSDTN-------TLWLLQRLAPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSLGACYGEESEERHAVEQQLLSREIRNVLAVGGPSR-SGEVKFNNWREKFQQSGFRGVSLAGNAAAQATLLLGMFHSDGYTLAEDNGALKLGWKDLCLLTASAWRPPP 780
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCR_MAIZE (Protein SCARECROW OS=Zea mays GN=SCR PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.961e-25 Identity = 80/211 (37.91%), Postives = 120/211 (56.87%), Query Frame = -3 Query: 263 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQ-LHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQ--PEKALAEIYL-QREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAWHAV 883 + A ++ + F F VA + +V P L V+ +EA+AV+ + L+ + GSD L I+ L PK++T+VEQ+ +H+ FL RF A++YYS +FDSL+A + PE+ + E L REI NV+ G AR + WR +LA +GFR L +A QAS+LL +F ++GY++ E G L LGW L+ ASAW + Sbjct: 462 DFADTLGLPFEFCAVA-EKAGNVDPEKLGVTRREAVAVHWLHHSLYDVTGSD-------SNTLWLIQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYGEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGALKLGWKDLCLLTASAWRPI 662
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSJ (Protein SCARECROW 2 OS=Oryza sativa subsp. japonica GN=SCR2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.353e-24 Identity = 78/211 (36.97%), Postives = 120/211 (56.87%), Query Frame = -3 Query: 263 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQ-LHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQ--PEKALAEIYL-QREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAWHAV 883 + A ++ + F F VA + ++ P L V+ +EA+AV+ + L+ + GSD L I+ L PK++T+VEQ+ +H+ FL RF A++YYS +FDSL+A + PE+ + E L REI NV+ G AR + WR +LA +GFR L +A QA++LL +F ++GY++ E G L LGW L+ ASAW + Sbjct: 455 DFADTLGLPFEFCPVA-DKAGNLDPEKLGVTRREAVAVHWLRHSLYDVTGSD-------SNTLWLIQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRVSSLAGSAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWRPI 655
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCR2_ORYSI (Protein SCARECROW 2 OS=Oryza sativa subsp. indica GN=SCR2 PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.353e-24 Identity = 78/211 (36.97%), Postives = 120/211 (56.87%), Query Frame = -3 Query: 263 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQ-LHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQ--PEKALAEIYL-QREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAWHAV 883 + A ++ + F F VA + ++ P L V+ +EA+AV+ + L+ + GSD L I+ L PK++T+VEQ+ +H+ FL RF A++YYS +FDSL+A + PE+ + E L REI NV+ G AR + WR +LA +GFR L +A QA++LL +F ++GY++ E G L LGW L+ ASAW + Sbjct: 455 DFADTLGLPFEFCPVA-DKAGNLDPEKLGVTRREAVAVHWLRHSLYDVTGSD-------SNTLWLIQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRVSSLAGSAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWRPI 655
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSI (Protein SCARECROW 1 OS=Oryza sativa subsp. indica GN=SCR1 PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.353e-24 Identity = 78/211 (36.97%), Postives = 120/211 (56.87%), Query Frame = -3 Query: 263 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQ-LHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQ--PEKALAEIYL-QREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAWHAV 883 + A ++ + F F VA + ++ P L V+ +EA+AV+ + L+ + GSD L I+ L PK++T+VEQ+ +H+ FL RF A++YYS +FDSL+A + PE+ + E L REI NV+ G AR + WR +LA +GFR L +A QA++LL +F ++GY++ E G L LGW L+ ASAW + Sbjct: 454 DFADTLGLPFEFCPVA-DKAGNLDPEKLGVTRREAVAVHWLRHSLYDVTGSD-------SNTLWLIQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRVSSLAGSAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWRPI 654
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCL3_ARATH (Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.353e-24 Identity = 83/264 (31.44%), Postives = 114/264 (43.18%), Query Frame = -3 Query: 272 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGS---------------------------------------------------DPARNSPM------EMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEAC---PLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAW 883 E A ++I F F V SRL+ + L+V EALAV+S+LQLH L S D A + P+ + L I L+PK+M V EQ+S+HN ++R +LY Y+ +FD LE Q + ++ EI N++ CEG R ERHE L KW R+ AGF + L A QA LL +GY ++E GC + W RPL + SAW Sbjct: 216 EEAEKLDIPFQFNPVV-SRLDCLNVEQLRVKTGEALAVSSVLQLHTFLASDDDLMRKNCALRFQNNPSGVDLQRVLMMSHGSAAEARENDMSNNNGYSPSGDSASSLPLPSSGRTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEESGCAVICWQDRPLYSVSAW 478
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSJ (Protein SCARECROW 1 OS=Oryza sativa subsp. japonica GN=SCR1 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.471e-24 Identity = 78/211 (36.97%), Postives = 119/211 (56.40%), Query Frame = -3 Query: 263 ELARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQ-LHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQ--PEKALAEIYL-QREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAWHAV 883 + A ++ + F F VA + ++ P L V+ +EA+AV+ + L+ + GSD L I+ L PK++T+VEQ+ +H+ FL RF A++YYS +FDSL+A + PE+ + E L REI NV+ G AR + WR +LA +GFR L +A QA +LL +F ++GY++ E G L LGW L+ ASAW + Sbjct: 446 DFADTLGLPFEFCPVA-DKAGNLDPEKLGVTRREAVAVHWLRHSLYDVTGSD-------SNTLWLIQRLAPKVVTMVEQDLSHSG-SFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRVSSLAGSAAAQAVLLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWRPI 646 The following BLAST results are available for this feature:
BLAST of CX043948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043948 ID=CX043948; Name=CX043948; organism=Citrus sinensis; type=EST; length=885bpback to top |