CX043948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCL30_ARATH (Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.040e-17 Identity = 55/201 (27.36%), Postives = 92/201 (45.77%), Query Frame = -3 Query: 272 NIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEI---YLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAW 865 N+ F + +A + E++ L ++ E VN IL+L + NSP + L R++NP + E +N P FL RF AL++ S++FD E + + + + R+ +V+ CEGS R R E +W+ R+ AGFRP L + ++ + + ++ + GW R L A S W Sbjct: 379 NVPFEYSFIAKN-WENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCW 578
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: MOC_ORYSJ (Protein MONOCULM 1 OS=Oryza sativa subsp. japonica GN=MOC1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16 Identity = 65/204 (31.86%), Postives = 100/204 (49.02%), Query Frame = -3 Query: 272 TFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESN------HNQPEFLDRFTTALYYYSTMFDSLEAC--PLQPEK-ALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTL-FSAEGYSVEETEGCLTLGWHSRPLIAASAW 853 T G AA+ L+ P E LAVN ++ LH L G D + L W++ ++P ++T+ E+E+ + + R A+ +YS +F++LEA P E+ A+ + L REI V G + + +W AGF L + A QA +LL L + +EGY V+E G LGW +RPL++ SAW Sbjct: 241 TSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNLAGHDE-----LAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAV---GPSGGRWWRGIERWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAW 436
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCL4_ARATH (Scarecrow-like protein 4 OS=Arabidopsis thaliana GN=SCL4 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.574e-16 Identity = 61/184 (33.15%), Postives = 101/184 (54.89%), Query Frame = -3 Query: 272 QVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQRE-----ICNVVCCEGSA-RVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEG-YSVEETE-GCLTLGWHSRPLIAASAW 799 +V P E LAVN +LQL+KLL P + ++ L ++LNP+++T+ E E + N+ F +R AL +YS +F+SLE P + + ++RE I ++ E + ER E +WR + AGF + L + A QA +LL ++ YS+ E++ G ++L W+ PL+ S+W Sbjct: 405 RVDPDEVLAVNFMLQLYKLLDETP---TIVDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLE--PNLGRDSEERVRVERELFGRRISGLIGPEKTGIHRERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSW 583
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCL13_ARATH (Scarecrow-like protein 13 OS=Arabidopsis thaliana GN=SCL13 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.845e-15 Identity = 52/145 (35.86%), Postives = 81/145 (55.86%), Query Frame = -3 Query: 455 LARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEK---ALAEIYLQREICNVVCCEGSARVERHEPL 880 LA+S + F F S + V+ L + P A+ VN LH + + + + +L I++L+PK++T+VEQESN N FL RF L YY+ MF+S++A + +K + + + R+I N++ CE S RVERHE L Sbjct: 138 LAQSCGVPFEFHDAIMSGCK-VQREHLGLEPGFAVVVNFPYVLHHMPDESVSVENHRDRLLHLIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHCVARDIVNMIACEESERVERHEVL 281
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCL7_ARATH (Scarecrow-like protein 7 OS=Arabidopsis thaliana GN=SLC7 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.844e-14 Identity = 59/186 (31.72%), Postives = 98/186 (52.69%), Query Frame = -3 Query: 272 QVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEK---ALAEIYLQREICNVVCCEG-----SARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFS-AEGYSVEETE-GCLTLGWHSRPLIAASAW 799 +V P E L VN +L+L+KLL + + L R+LNP+I+T+ E E + N+ EF +R +L +YS +F+SLE + K + + R I ++V + R E +WR + AGF P+ + A QA +LL ++ + YS+ E+E G ++L W++ PL+ S+W Sbjct: 359 RVDPDEVLVVNFMLELYKLLDETA---TTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSW 541
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: NSP2_MEDTR (Nodulation-signaling pathway 2 protein OS=Medicago truncatula GN=NSP2 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.409e-14 Identity = 68/209 (32.54%), Postives = 97/209 (46.41%), Query Frame = -3 Query: 272 ARSVNIRFTFRGVAASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEA-CPLQPEKALAEIYLQREICNVVCCEGSARVER---HEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEET---EGCLTLGWHSRPLIAASAW 877 A S+ F+F E +P L++ EAL N +L L L P + L + LNPK++T+VE+E F++RF +L++YS +FDSLEA P+Q A ++R R+ R E W L GFR + + QA +LL LF+ +GY VEE L L W SR L++AS W Sbjct: 298 AASLGQPFSFHHCRLDSDETFRPSALKLVRGEALVFNCMLNLPHLSYRAP---ESVASFLNGAKTLNPKLVTLVEEEVGSVIGGFVERFMDSLHHYSAVFDSLEAGFPMQNR---ARTLVERVFFGPRIAGSLGRIYRTGGEEERRSWGEWLGEVGFRGVPVSFANHCQAKLLLGLFN-DGYRVEEVGVGSNKLVLDWKSRRLLSASLW 499
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14 Identity = 55/211 (26.07%), Postives = 94/211 (44.55%), Query Frame = -3 Query: 272 ARSVNIRFTFRGVA----ASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEACPLQPEKALAEIYLQ-----REICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAW 877 A+ + F ++ +A A +LED L + E VN + + L S + VL I +NP + +N P F+ RF AL+++S++FD LE + P + ++L+ RE NV+ CEG RVER E +W R +G + + + + + F + + +++ L GW R ++A S W Sbjct: 509 AKLFGVPFEYKAIAKKWDAIQLED-----LDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLET--IVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVW 712
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SHR_ARATH (Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13 Identity = 55/188 (29.26%), Postives = 85/188 (45.21%), Query Frame = -3 Query: 272 LQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESN-------HNQPEFLDRFTTALYYYSTMFDSLEAC--PLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGC--LTLGWHSRPLIAASAW 802 L V P E LA+N + +H + +R SP + V+ R L P+I+TVVE+E++ EFL F L ++ F+S E E+ + E R I ++V CE S ER E KW R+ +GF + LL + +S+ + + L W +P++ ASAW Sbjct: 345 LDVKPDEVLAINCVGAMHGIA----SRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAW 528
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SCL26_ARATH (Scarecrow-like protein 26 OS=Arabidopsis thaliana GN=SCL26 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.749e-13 Identity = 59/176 (33.52%), Postives = 89/176 (50.57%), Query Frame = -3 Query: 272 EALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESN-HNQPEFLDRFTTALYYYSTMFDSLEA--CPLQPEKALAE-IYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEET-EGCLTLGWHSRPLIAASAW 784 EA+ +N +L L + P S + L + LNPK++T+V +E FL RF L+ +S +FDSLEA P + E +++ + N + +A E A W L GF+PL + QA +LL+LF+ +G+ VEE + L LGW SR L++AS W Sbjct: 306 EAVVINCMLHLPRFSHQTP---SSVISFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFIGPWVANWLT-RITANDAEVESFASWPQWLETNGFKPLEVSFTNRCQAKLLLSLFN-DGFRVEELGQNGLVLGWKSRRLVSASFW 476
BLAST of CX043948 vs. ExPASy Swiss-Prot
Match: SHR2_ORYSI (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica GN=SHR2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.726e-12 Identity = 63/230 (27.39%), Postives = 99/230 (43.04%), Query Frame = -3 Query: 272 ELARSVNIRFTFRGVA-ASRLEDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPE------------FLDRFTTALYYYSTMFDSLEAC--PLQPEKALAEIYLQREICNVVCCEGSARVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLT-----------LGWHSRPLIAASAW 883 + AR + + F+FR V A L D+ L + A A ++ ++ L G R++ + +R L P+++TVVE+E++ PE F+ F L ++S DSLE E+ E + R I ++V C S ER E A W R+ AGF P + LL + EG+S+ + G L W +P++ ASAW Sbjct: 377 KFARLMGVPFSFRAVHHAGDLADLDLAALDLREGGATAALAVNCVNALRGVARGRDA----FVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYK-EGWSMRDAGGATDDAAGAAAAGAFLAWKEQPVVWASAW 601 The following BLAST results are available for this feature:
BLAST of CX043948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043948 ID=CX043948; Name=CX043948; organism=Citrus sinensis; type=EST; length=885bpback to top |