CX043933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17 Identity = 41/124 (33.06%), Postives = 69/124 (55.65%), Query Frame = -3 Query: 317 RLHKDITELNLPEACKISFPNGQDDLMNFEVSIK-PDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLR 685 R++K++ +L + S DDL +++ +I P + YQ G F + P YP PKV T++YHPNI+ G++CL++LR W P L I+ ++ + L +PN +DPL + A + + Sbjct: 5 RINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYK 128
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBC12_CAEEL (NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17 Identity = 44/116 (37.93%), Postives = 68/116 (58.62%), Query Frame = -3 Query: 284 LMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLRED------WKPVLNINTIIYGLYHLFTE-PNHEDPLNHDAAELLRDSPAYFESNVR 610 L E+++ P EG Y+ G F F VPP Y + P VKC TKV+HPNI+ +G++CL++LR++ W+P N+ +++GL LF + + D LN AA++ + F VR Sbjct: 58 LHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVR 173
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UB2D3_RAT (Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17 Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = -3 Query: 317 RLHKDITELNLPEACKISFPNGQDDLMNFEVSIK-PDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLR 685 R++K++++L + S DD+ +++ +I P++ YQ G F + P YP PKV T++YHPNI+ G++CL++LR W P L I+ ++ + L +PN +DPL + A + + Sbjct: 5 RINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYK 128
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UB2D3_PONAB (Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17 Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = -3 Query: 317 RLHKDITELNLPEACKISFPNGQDDLMNFEVSIK-PDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLR 685 R++K++++L + S DD+ +++ +I P++ YQ G F + P YP PKV T++YHPNI+ G++CL++LR W P L I+ ++ + L +PN +DPL + A + + Sbjct: 5 RINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYK 128
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UB2D3_MOUSE (Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17 Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = -3 Query: 317 RLHKDITELNLPEACKISFPNGQDDLMNFEVSIK-PDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLR 685 R++K++++L + S DD+ +++ +I P++ YQ G F + P YP PKV T++YHPNI+ G++CL++LR W P L I+ ++ + L +PN +DPL + A + + Sbjct: 5 RINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYK 128
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17 Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = -3 Query: 317 RLHKDITELNLPEACKISFPNGQDDLMNFEVSIK-PDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLR 685 R++K++++L + S DD+ +++ +I P++ YQ G F + P YP PKV T++YHPNI+ G++CL++LR W P L I+ ++ + L +PN +DPL + A + + Sbjct: 5 RINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYK 128
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17 Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = -3 Query: 317 RLHKDITELNLPEACKISFPNGQDDLMNFEVSIK-PDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLR 685 R++K++++L + S DD+ +++ +I P++ YQ G F + P YP PKV T++YHPNI+ G++CL++LR W P L I+ ++ + L +PN +DPL + A + + Sbjct: 5 RINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYK 128
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17 Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = -3 Query: 305 PDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPA 583 P + ++ GTF +P YP APKV+ TK+YHPN+D G +CL++L++ W P L I T++ + L + PN +DPL +D AE + + A Sbjct: 42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEA 134
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17 Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = -3 Query: 305 RLHKDITELNLPEACKISFPNGQDDLMNFEVSIK-PDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPA 685 R+ K+ L A IS ++++ F V I P + Y+ G F +P YP APKV+ TK+YHPNID G +CL++L++ W P L I T++ + L + PN +DPL+ + A+ + + A Sbjct: 9 RIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEA 136
BLAST of CX043933 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17 Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = -3 Query: 305 PDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFTEPNHEDPLNHDAAELLRDSPA 583 P + ++ GTF +P YP APKV+ TK+YHPN+D G +CL++L++ W P L I T++ + L + PN +DPL +D AE + + A Sbjct: 42 PQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEA 134 The following BLAST results are available for this feature:
BLAST of CX043933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043933 ID=CX043933; Name=CX043933; organism=Citrus sinensis; type=EST; length=816bpback to top |