CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PSE14 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=dxs PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.637e-21 Identity = 67/164 (40.85%), Postives = 95/164 (57.93%), Query Frame = -1 Query: 253 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV---LSLLG 732 P+ R+PRG G A++ P+EIGKG + +G VAIL +G VQ LA ++ ++ + TV D RF KPLD L+ + A HE+L+T+EE +V GG G+ V FL + IL L L LPD Y++H PA L E GL ++ I A + L+L+G Sbjct: 477 PAAVRYPRGTGPDALIETGLD--PVEIGKGVVRRQGQGVAILVFG--VQ---LADALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARANILKSVLHLG---LPDTYVEHAKPAQMLAECGLDAQGIEAAINERLALIG 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BORPE (1-deoxy-D-xylulose-5-phosphate synthase OS=Bordetella pertussis GN=dxs PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.637e-21 Identity = 65/161 (40.37%), Postives = 89/161 (55.28%), Query Frame = -1 Query: 253 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 732 P+ R+PRG G GA + PL GKG + EG R+AILG+G++VQ + AA I VAD RF KPLD +L+ +LA H+ L+TVEE ++ GG GS V L +G+ L + + LPD +IDHG A L GL + I + + G Sbjct: 466 PASVRYPRGAGCGAAVGEGLATVPL--GKGLVRREGRRIAILGFGTLVQAALGAAGQ-----IDAMVADMRFVKPLDRELVLELAARHDALVTVEEAAIMGGAGSAVLETLAEAGV---TLPVLQLGLPDAFIDHGDQAALLAGLGLDAAGIERAIRARFG 616
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACWK (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus weihenstephanensis (strain KBAB4) GN=dxs PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.138e-21 Identity = 59/161 (36.65%), Postives = 90/161 (55.90%), Query Frame = -1 Query: 289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768 H+V TA +D P R+ RGNG+G + K P IG L EG + AIL +G+ + + AA L+ +SV V +ARF KP+D + +L ++ ++T+EE +GGFG+ V F + +G + M +PDR+I+HGS LEE GL++ Sbjct: 456 HLVYTAMQYEDGPIALRYARGNGLGVQMDEELKAIP--IGTWETLKEGTQAAILTFGTTIPMAMEAAERLEQAGVSVKVVNARFIKPMDEAYLHELLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSA--LIERMGIPDRFIEHGSVTKLLEEIGLTT 612
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PROM5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9515) GN=dxs PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.792e-21 Identity = 57/158 (36.08%), Postives = 93/158 (58.86%), Query Frame = -1 Query: 262 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 732 P+ R PRG+G G + + PL IG+G IL +G+ + I+ YGS+V + + +LK ++IS V +ARF +PLD DLI LAN+ + ++T+EEG+ +GGFGS + L + I + + + +PD +DH SP + GL +S +++ Sbjct: 470 PTALRIPRGSGRGVAV-MDEGWEPLNIGEGEILEDGEDILIVAYGSMVSSAIETSKLLKDKNISPCVINARFVRPLDKDLILPLANKIKKVVTMEEGTLIGGFGSAIVELLNDNDI---NIPVFRIGIPDVLVDHASPDQSKTQLGLMPNQMSENIIN 623
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_DEHSC (1-deoxy-D-xylulose-5-phosphate synthase OS=Dehalococcoides sp. (strain CBDB1) GN=dxs PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.792e-21 Identity = 61/177 (34.46%), Postives = 101/177 (57.06%), Query Frame = -1 Query: 241 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKE 768 H++ TA V +P R+PRG G GA + + P IG+ IL+ G VAIL G V A +L I T+ + R+ PLD++L+ ++A H+ L+TVEE + GG GS + L +G+++ +K+ ++ +PD++++HG+ + + GL + I+ VLSL+G P E Sbjct: 466 HLIYTA-VNSGKPFALRYPRGFGEGAEIESSLHNIP--IGQNEILVNGSDVAILATGKSVAFAKDALEILTESGIKPTLVNNRYISPLDSELVLKIAQSHKYLVTVEENVISGGLGSRINTLLAEAGLVN-KIKIANIGIPDKFVEHGNQSLLRAKYGLDGKGIAQRVLSLVGNPNE 638
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BURCM (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=dxs PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.646e-21 Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = -1 Query: 268 AVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILM-----EGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 750 A+ P+ R+PRG G G + T + +GKG + EG RVAIL +G++V A ++ +++ TVA+ RF KP+D L+R+LA H+ L+TVEEG V GG GS L SG++ ++L LPD++IDHG PA L + GL I+ ++ Sbjct: 471 ALQQPNPTAVRYPRGAGTGVATV--KEFTEIPLGKGEVRRRTSQPEGKRVAILAFGTMV-----APSLAAGEELDATVANMRFVKPIDAALVRELAETHDYLVTVEEGCVMGGAGSACVEALMESGVIRPVIQLG---LPDQFIDHGDPAKLLAQCGLDGAGIAKSI 627
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ACAM1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=dxs PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.646e-21 Identity = 63/171 (36.84%), Postives = 91/171 (53.22%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T D P R+PRG+G+G L PL IGK L GD V +L YG++V A+ML + TV +ARF KPLDT+LI LA + ++T+EEG + GGFGS V L ++ + + +PD+ ++H +P E GL+ ++ VL LL Sbjct: 459 MLVTGINYTDGPIAMRYPRGSGLGVGLMEEG-WEPLPIGKAETLRHGDDVLLLAYGTMVNLASQVADMLTEHGVRATVVNARFAKPLDTELIIPLAQKIGQVVTLEEGCLPGGFGSAVLEALMDHQVM---APVTRIGVPDQLVEHATPDQSKAELGLTPAQVAERVLGLL 625
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BURA4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia ambifaria (strain MC40-6) GN=dxs PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.762e-21 Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = -1 Query: 268 AVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILM-----EGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 750 A+ P+ R+PRG G G + T + +GKG + EG RVAIL +G++V A ++ +++ TVA+ RF KP+D L+R+LA H+ L+TVEEG V GG GS L SG++ ++L LPD++IDHG PA L + GL I+ ++ Sbjct: 459 ALQQPNPTAVRYPRGAGTGVATV--KEFTEIPLGKGEVRRRTSQPEGKRVAILAFGTMV-----APSLAAGEELDATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGSACVEALMESGVIRPVIQLG---LPDQFIDHGDPAKLLAQCGLDGAGIAKSI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACHK (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus thuringiensis subsp. konkukian GN=dxs PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.762e-21 Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = -1 Query: 289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768 H+V TA +D P R+ RGNG+G + K P IG L EG + AIL +G+ + + AA L+ +SV V +ARF KP+D + L ++ ++T+EE +GGFG+ V F + +G + M +PDR+I+HGS LEE GL++ Sbjct: 456 HLVYTAMQYEDGPIALRYARGNGLGVHMDEELKAIP--IGSWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSA--LVERMGIPDRFIEHGSVTKLLEEIGLTT 612
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACCZ (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus cereus (strain ZK / E33L) GN=dxs PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.762e-21 Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = -1 Query: 289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768 H+V TA +D P R+ RGNG+G + K P IG L EG + AIL +G+ + + AA L+ +SV V +ARF KP+D + L ++ ++T+EE +GGFG+ V F + +G + M +PDR+I+HGS LEE GL++ Sbjct: 456 HLVYTAMQYEDGPIALRYARGNGLGVHMDEELKAIP--IGSWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSA--LVERMGIPDRFIEHGSVTKLLEEIGLTT 612 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |