CX043881

Overview
NameCX043881
Unique NameCX043881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACC7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus cereus (strain AH187) GN=dxs PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.762e-21
Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = -1 
Query:  289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768
            H+V TA   +D P   R+ RGNG+G  +    K  P  IG    L EG + AIL +G+ +   + AA  L+   +SV V +ARF KP+D   +  L  ++  ++T+EE   +GGFG+ V  F + +G       +  M +PDR+I+HGS    LEE GL++
Sbjct:  456 HLVYTAMQYEDGPIALRYARGNGLGVHMDEELKAIP--IGSWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSA--LVERMGIPDRFIEHGSVTKLLEEIGLTT 612
[Close]
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACC1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus cereus (strain ATCC 10987) GN=dxs PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.762e-21
Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = -1 
Query:  289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768
            H+V TA   +D P   R+ RGNG+G  +    K  P  IG    L EG + AIL +G+ +   + AA  L+   +SV V +ARF KP+D   +  L  ++  ++T+EE   +GGFG+ V  F + +G       +  M +PDR+I+HGS    LEE GL++
Sbjct:  456 HLVYTAMQYEDGPIALRYARGNGLGVHMDEELKAIP--IGSWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSA--LVERMGIPDRFIEHGSVTKLLEEIGLTT 612
[Close]
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACC0 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus cereus (strain AH820) GN=dxs PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.762e-21
Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = -1 
Query:  289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768
            H+V TA   +D P   R+ RGNG+G  +    K  P  IG    L EG + AIL +G+ +   + AA  L+   +SV V +ARF KP+D   +  L  ++  ++T+EE   +GGFG+ V  F + +G       +  M +PDR+I+HGS    LEE GL++
Sbjct:  456 HLVYTAMQYEDGPIALRYARGNGLGVHMDEELKAIP--IGSWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSA--LVERMGIPDRFIEHGSVTKLLEEIGLTT 612
[Close]
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACAN (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus anthracis GN=dxs PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.762e-21
Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = -1 
Query:  289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768
            H+V TA   +D P   R+ RGNG+G  +    K  P  IG    L EG + AIL +G+ +   + AA  L+   +SV V +ARF KP+D   +  L  ++  ++T+EE   +GGFG+ V  F + +G       +  M +PDR+I+HGS    LEE GL++
Sbjct:  456 HLVYTAMQYEDGPIALRYARGNGLGVHMDEELKAIP--IGSWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSA--LVERMGIPDRFIEHGSVTKLLEEIGLTT 612
[Close]
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACAC (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=dxs PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.762e-21
Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = -1 
Query:  289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768
            H+V TA   +D P   R+ RGNG+G  +    K  P  IG    L EG + AIL +G+ +   + AA  L+   +SV V +ARF KP+D   +  L  ++  ++T+EE   +GGFG+ V  F + +G       +  M +PDR+I+HGS    LEE GL++
Sbjct:  456 HLVYTAMQYEDGPIALRYARGNGLGVHMDEELKAIP--IGSWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSA--LVERMGIPDRFIEHGSVTKLLEEIGLTT 612
[Close]
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACAA (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus anthracis (strain A0248) GN=dxs PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.762e-21
Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = -1 
Query:  289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768
            H+V TA   +D P   R+ RGNG+G  +    K  P  IG    L EG + AIL +G+ +   + AA  L+   +SV V +ARF KP+D   +  L  ++  ++T+EE   +GGFG+ V  F + +G       +  M +PDR+I+HGS    LEE GL++
Sbjct:  456 HLVYTAMQYEDGPIALRYARGNGLGVHMDEELKAIP--IGSWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSA--LVERMGIPDRFIEHGSVTKLLEEIGLTT 612
[Close]
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACCR (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dxs PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.220e-21
Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = -1 
Query:  289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768
            H+V TA   +D P   R+ RGNG+G  +    K  P  IG    L EG + AIL +G+ +   + AA  L+   +SV V +ARF KP+D   +  L  ++  ++T+EE   +GGFG+ V  F + +G       +  M +PDR+I+HGS    LEE GL++
Sbjct:  456 HLVYTAMQYEDGPIALRYARGNGLGVHMDEELKAIP--IGTWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSA--LVERMGIPDRFIEHGSVTKLLEEIGLTT 612
[Close]
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACC4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus cereus (strain B4264) GN=dxs PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.220e-21
Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = -1 
Query:  289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768
            H+V TA   +D P   R+ RGNG+G  +    K  P  IG    L EG + AIL +G+ +   + AA  L+   +SV V +ARF KP+D   +  L  ++  ++T+EE   +GGFG+ V  F + +G       +  M +PDR+I+HGS    LEE GL++
Sbjct:  456 HLVYTAMQYEDGPIALRYARGNGLGVHMDEELKAIP--IGTWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSA--LVERMGIPDRFIEHGSVTKLLEEIGLTT 612
[Close]
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACC2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus cereus (strain G9842) GN=dxs PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.220e-21
Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = -1 
Query:  289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768
            H+V TA   +D P   R+ RGNG+G  +    K  P  IG    L EG + AIL +G+ +   + AA  L+   +SV V +ARF KP+D   +  L  ++  ++T+EE   +GGFG+ V  F + +G       +  M +PDR+I+HGS    LEE GL++
Sbjct:  456 HLVYTAMQYEDGPIALRYARGNGLGVHMDEELKAIP--IGTWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSA--LVERMGIPDRFIEHGSVTKLLEEIGLTT 612
[Close]
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SHEON (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella oneidensis GN=dxs PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.123e-21
Identity = 64/171 (37.43%), Postives = 94/171 (54.97%), Query Frame = -1 
Query:  256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765
            M+ T    D  PS  R+PRG+  GA        T L IGKG I   G R+A+L +G+      LAA +  ++ +  TV D RF KPLD DL++++A  H++L+TVEE ++ GG GS V   L L   L  P  +  + LPD +I HGSP + + +  L +  + A + + L
Sbjct:  460 MLYTGYCYDAGPSAVRYPRGSATGATQV--EAMTALPIGKGVIKRLGKRIALLNFGTT-----LAAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGV---LELLQQLKMPKPVLQIGLPDEFIKHGSPDEVIHDLQLDAEGMLAQINAYL 620
The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 453
Match NameE-valueIdentityDescription
DXS_BACC74.762e-2136.651-deoxy-D-xylulose-5-phosphate synthase OS=Bacillu... [more]
DXS_BACC14.762e-2136.651-deoxy-D-xylulose-5-phosphate synthase OS=Bacillu... [more]
DXS_BACC04.762e-2136.651-deoxy-D-xylulose-5-phosphate synthase OS=Bacillu... [more]
DXS_BACAN4.762e-2136.651-deoxy-D-xylulose-5-phosphate synthase OS=Bacillu... [more]
DXS_BACAC4.762e-2136.651-deoxy-D-xylulose-5-phosphate synthase OS=Bacillu... [more]
DXS_BACAA4.762e-2136.651-deoxy-D-xylulose-5-phosphate synthase OS=Bacillu... [more]
DXS_BACCR6.220e-2136.651-deoxy-D-xylulose-5-phosphate synthase OS=Bacillu... [more]
DXS_BACC46.220e-2136.651-deoxy-D-xylulose-5-phosphate synthase OS=Bacillu... [more]
DXS_BACC26.220e-2136.651-deoxy-D-xylulose-5-phosphate synthase OS=Bacillu... [more]
DXS_SHEON8.123e-2137.431-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14A06_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14A06-B12-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bp
TGAAGATCAATGCCTTGTATCTTTATTACAAGAAAAAATTGTGAATGTAC
AGAAACAACAAAAGGCTTGACCATTACATTTATAATCCCACGGTAATGCT
TCATGGTTACAGGGGATATGAAGGTAAAGATTCTAAGAGTTGGACCTTAT
AGTGTATAACACCCCCAACTTGGAATTGTAAGTTGGATCCGAAGGGCAAG
ATGTTGTTTGATTTTGTATGATTACTTAAATCAGAAGGGCTTCTTTTGGC
CTCCCTAAGAGAGATAAGACTGTTGCAGAGATATGCCTTGAGGAGAGCCC
TGATTCTTCAAGCTGATCGGCTGGTGATCCATGGTCAATGTATCTATCAG
GAAGCACCATTGATCTCAACTTGAGAGGTCCATCCAGAATGCCACTTAAG
GTTAGAAAGTGACATACATGAGAGCCAAAGCCTCCCACAGAACCCTCTTC
CACAGTAATTAGGATTTCATGCTCATTGGCCAACTGTCTAATGAGGTCTG
TATCCAAAGGTTTGCAAAATCTTGCATCAGCCACTGTCACGGAAATGTCT
TGGCTCTTAAGCATGTTCGCAGCTAGCACACATTGTTGGACTACAGAACC
ATAGCCCAAAATTGCCACTCTATCGCCTTCCATTAGGATTCTTCCCTTCC
CAATCTCAAGTGGAGTTCCTTTGTTATTANGTGGGAGAACTGCTCCAATT
CCGTTGCCCCTTGGAAATCTGAAACAGCTGGGCCTGTCATCTATAACTGC
TGCTGTAGCGACCATGTG
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