CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SHESM (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain MR-4) GN=dxs PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.386e-20 Identity = 64/171 (37.43%), Postives = 93/171 (54.39%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T D PS R+PRG+ GA T L IGKG I G R+A+L +G+ LAA + ++ + TV D RF KPLD DL++++A H++L+TVEE ++ GG GS V L L L P + + LPD +I HGSP + + L + + A + + L Sbjct: 460 MLYTGYCYDAGPSAVRYPRGSATGATQV--EAMTALPIGKGVIKRLGKRIAMLNFGTT-----LAAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGV---LELLQKLKMPKPVLQIGLPDEFIKHGSPEEVTHDLQLDAEGMLAQINAFL 620
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PELLD (1-deoxy-D-xylulose-5-phosphate synthase OS=Pelodictyon luteolum (strain DSM 273) GN=dxs PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.386e-20 Identity = 68/174 (39.08%), Postives = 91/174 (52.30%), Query Frame = -1 Query: 247 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRP 765 M+ TA + P R+PRG+ G P T LE G+GRI+ EG + GS+VQ V AA +L+++ I + D RF KPLDT LI +LA ++T+EE S+ GG GS V L S LK+ LPDR+I HGS D E+GL + I+ V P Sbjct: 462 MLHTALYHIEGPVAIRYPRGSSGGG--PLRKDFTRLEPGRGRIIREGTGPVLFAIGSMVQAAVEAAALLEAEGIKPDIVDMRFLKPLDTALIDRLAASATHIVTIEENSILGGLGSAVSDHLASSPKKTPLLKIG---LPDRFITHGSMQDLYRETGLDAAGIAEHVKEFYRTP 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_DEHSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Dehalococcoides sp. (strain BAV1) GN=dxs PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.386e-20 Identity = 60/177 (33.90%), Postives = 100/177 (56.50%), Query Frame = -1 Query: 241 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKE 768 H++ TA V +P R+PRG G G + + P IG+ IL+ G VAIL G V A +L I T+ + R+ PLD++L+ ++A H+ L+TVEE + GG GS + L +G+++ +K+ ++ +PD++++HG+ + + GL + I+ VLSL+G P E Sbjct: 452 HLLYTA-VNSGKPFALRYPRGFGEGVEIESSLHNIP--IGQNEILVNGSDVAILATGKSVAFAREALEILTESGIKPTLVNNRYISPLDSELVLKIAQSHKYLVTVEENVISGGLGSRINTLLAEAGLVN-KIKIANIGIPDKFVEHGNQSLLRAKYGLDGKGIAQRVLSLVGNPNE 624
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_THIDA (1-deoxy-D-xylulose-5-phosphate synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dxs PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 66/164 (40.24%), Postives = 90/164 (54.88%), Query Frame = -1 Query: 268 TAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 756 + A + D P+ R+PRG G GA + + P+EIGKG G VA+L +GS+V + AA L + TVAD RF KPLD DL+ +LA H +L+T+EE +V GG G+ V L GI+ L+L L D +I+HG A L GL + I V Sbjct: 456 STAFLHDGPAAVRYPRGCGTGAAIEPGLE--PVEIGKGVCRRRGRDVALLAFGSLVAPALTAAERLDA-----TVADMRFVKPLDVDLVGELAAGHRLLVTLEENAVAGGAGAAVAELLAQLGIVVPVLQLG---LSDVFIEHGDAAAMLAACGLDAPGIERAV 609
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SHEPW (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=dxs PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 62/160 (38.75%), Postives = 90/160 (56.25%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P+ R+PRG+ GA T L IGKG I +G ++AIL +G+ LA +++ ++ TVAD RF KPLD DLI++LA H++L+TVEE ++ GG GS V L L L P + + LPD +I HG+P + + E L + I + L Sbjct: 471 PTAVRYPRGSATGAKQVETM--TALPIGKGLIKRQGQKIAILNFGTT-----LANSLVAAEAFDATVADMRFVKPLDVDLIKELAETHDVLVTVEENAIMGGAGSGV---LELLQTLKLPKPVLQIGLPDEFIKHGAPDEIISELRLDAAGIEKQIADYL 620
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SHEDO (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dxs PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 63/171 (36.84%), Postives = 95/171 (55.56%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T D P+ R+PRG GA + T L IGKGR+ +G ++AIL +G+ LA+ + ++ + +VAD RF KPLD DL+ LA EH++++T+EE ++ GG GS V L I L++ LPD +I HG+P + + E L S+ I A + L Sbjct: 460 MLYTGYRYQDGPTAVRYPRGFATGA--EQIEQMTALPIGKGRVCRQGKKIAILNFGTT-----LASALEVAEQLDASVADMRFIKPLDVDLLHTLALEHDVIVTIEENAIMGGAGSGVIEALHKLKICKPVLQIG---LPDEFIKHGAPDEIIAELRLDSKGILAQIQEYL 620
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_POLSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=dxs PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 69/196 (35.20%), Postives = 102/196 (52.04%), Query Frame = -1 Query: 172 TAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI*VIIQNQTTSCPSDPTYNS 756 ++A + P R+PRG G G + PL GKG I EG VAIL +G+++ + AA L VTV + R+ KPLDT+L+ ++A HE L+T+EEG++ GG GS V L +G+ L+L L D +I+HG PA L GL + I A V++ G ++Q + + P+ P S Sbjct: 457 SSAFEQNHPVAVRYPRGAGAGVEPEPGLQ--PLPFGKGEIRREGSGVAILAFGTLLYPALQAAEKL-----GVTVVNMRWAKPLDTELLLKVAASHEALVTLEEGAIMGGAGSAVGEALQAAGLGKPLLQLG---LKDEFIEHGDPAKLLALQGLDAAGIEAAVMARFGS---------VLQPEKSGKPAKPALKS 633
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACCN (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dxs PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 58/161 (36.02%), Postives = 89/161 (55.28%), Query Frame = -1 Query: 289 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSS 768 H+V TA +D P R+PRGNG+G +P +++ + IG L EG + AI+ +G+ + + AA L +SV V +ARF KP+D + L ++ ++T+EE +GGFGS V F G + M +PD +I+HGS LEE GL++ Sbjct: 456 HLVYTAMQYEDGPIALRYPRGNGLG--VPMDDEFKVIPIGTWETLREGTQAAIVTFGTTIPMAMEAAERLGKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGSGVMEFAAEHGYHSA--LIERMGIPDYFIEHGSVTKLLEEIGLTT 612
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SHESH (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sediminis (strain HAW-EB3) GN=dxs PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.364e-20 Identity = 62/163 (38.04%), Postives = 93/163 (57.06%), Query Frame = -1 Query: 280 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHI 765 M+ T + P+ R+PRG+ G P + L IGKG I +G +VAIL +G+++ + AA + I TVAD RF KPLD +L+++LA+ H++L+TVEE ++ GG GS V L L L P+ + + LPD +I HG+ + L E L + I Sbjct: 460 MLYTGYCYREGPTAVRYPRGSATGE--PQVEEMQALPIGKGLIKRQGQKVAILNFGTLLADVLTAA-----ESIDATVADMRFVKPLDVELVKELASSHDLLVTVEENAIMGGAGSGV---LELLQQLKQPMPVLQIGLPDEFIKHGASGEILAELRLDAAGI 612
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_METFK (1-deoxy-D-xylulose-5-phosphate synthase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dxs PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.364e-20 Identity = 65/162 (40.12%), Postives = 92/162 (56.79%), Query Frame = -1 Query: 268 AVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 750 A + D PS R+PRG G GA + + + P IGKG + +G VAIL +GS++ + AA L + TVA+ RF KPLD +LI QLA+ H +++TVEE +V GG G+ V + + I L L LPD +I+HG L E GL++ I A + Sbjct: 457 AYLHDGPSAVRYPRGGGPGATITRDMQLLP--IGKGELRRQGSWVAILAFGSMLAPALEAAETLDA-----TVANMRFVKPLDANLINQLASSHTLIVTVEENAVMGGAGAAVMECMQAADIHTPVLCLG---LPDMFIEHGVHETMLAECGLNAAGIIAAI 608 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |