CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PROMM (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=dxs PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.032e-20 Identity = 58/157 (36.94%), Postives = 90/157 (57.32%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R PRG+G G +P ++G PL IG+G +L EGD + I+ YG +V ++ A +L+ I TV +ARF +PLD LI LA ++T+EEG++ GGFG+ V L+ +L ++ +PD+ +DH SP E GL+ +S + Sbjct: 470 PAALRIPRGSGEG--VPLLDEGWKPLAIGRGEVLCEGDDLLIVAYGVMVPAAMITAQLLQEAGIKATVINARFLRPLDQALIHPLARRIGSVVTMEEGALAGGFGAAVVESLSDQDVLVPTFRIG---IPDQLVDHASPQQSREALGLTPTQMSERI 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HAHCH (1-deoxy-D-xylulose-5-phosphate synthase OS=Hahella chejuensis (strain KCTC 2396) GN=dxs PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.032e-20 Identity = 59/156 (37.82%), Postives = 91/156 (58.33%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R+PRGNG GA + + LEIGK + G + IL +G++ L A + +++ + TV D RF KPLD ++I ++A H++L+T+EE + GG GS V FL GI L+L LPD +I+HG PA+ +E GL ++ I+ + Sbjct: 480 PAAVRYPRGNGPGADISPGLES--LEIGKANLRRRGAQTVILNFGAL-----LPAALGVAEESNFTVVDMRFIKPLDQNMILEMAGSHDLLVTLEENCILGGAGSGVIEFLASQGIAMPVLQLG---LPDEFIEHGKPAELHKEVGLDAQGIANAI 625
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BACHD (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus halodurans GN=dxs PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.032e-20 Identity = 62/177 (35.03%), Postives = 96/177 (54.24%), Query Frame = -1 Query: 241 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKE 768 HMV TA + P R+PRGNG G + K P IG +L EG IL +G+++ A+ L Q S+ + +AR KPLD ++ ++A ++T+EE +V G FGS V F G + + + M +PDR+I+HGS ++ LEE GL+S ++ + LL R ++ Sbjct: 455 HMVYTAIQYEGGPIAVRYPRGNGYGIKMDEVLKEIP--IGSWEVLQEGTDACILTFGTMIPVAEQASKELSQQGYSIRLINARSVKPLDEAMLHEIAKSGRPVLTLEETAVQGSFGSAVLEFFHDHGYHN--VVTQRMGIPDRFIEHGSVSELLEEIGLTSSQVANQLSKLLPRKQK 627
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HAEIG (1-deoxy-D-xylulose-5-phosphate synthase OS=Haemophilus influenzae (strain PittGG) GN=dxs PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.265e-20 Identity = 59/166 (35.54%), Postives = 94/166 (56.63%), Query Frame = -1 Query: 250 RPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 735 +P+ R+PRGN +G L TPLE IGK R++ EG ++AIL +G++ L + + S+ ++ TV D RF KP+D ++I LA H+ L+T+EE ++ GG GS V L SG L+L LPD +I + + L + GL ++ I +L+ + + Sbjct: 470 KPAAVRYPRGNAVGVKL------TPLEMLPIGKSRLIREGQKIAILNFGTL-----LPSALELSEKLNATVVDMRFVKPIDIEMINMLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG---LPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PROMS (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain AS9601) GN=dxs PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.877e-20 Identity = 53/147 (36.05%), Postives = 87/147 (59.18%), Query Frame = -1 Query: 295 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGL 732 P+ R PRG+G+G + + P+ IG+ IL EG+ + I+ YGS+V + A +LK+ +I+ + +ARF KPLD +LI LA+ + ++T+EEG+ +GGFGS + + I + + + +PD +DH SP E+ GL Sbjct: 470 PTALRIPRGSGLGVAV-MDEGWEPMNIGEAEILEEGEDILIIAYGSMVASAIETAKILKNMNINACIVNARFVKPLDKNLIMPLASRIQKVVTMEEGTLIGGFGSAIVELFNDNEI---NIPVYRIGIPDVLVDHASPDQSKEKLGL 612
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PROM3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9303) GN=dxs PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.877e-20 Identity = 57/157 (36.31%), Postives = 90/157 (57.32%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R PRG+G G +P ++G PL IG+G +L EGD + I+ YG +V ++ A +L+ + TV +ARF +PLD LI LA ++T+EEG++ GGFG+ V L+ +L ++ +PD+ +DH SP E GL+ +S + Sbjct: 470 PAALRIPRGSGEG--VPLLDEGWEPLAIGRGEVLCEGDDLLIVAYGVMVPAAMITAQLLQEAGVKATVINARFLRPLDQALIHPLARRIGRVVTMEEGALAGGFGAAVVESLSDQDVLVPTFRIG---IPDQLVDHASPQQSREALGLTPTQMSERI 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PROM2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9215) GN=dxs PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.877e-20 Identity = 54/157 (34.39%), Postives = 91/157 (57.96%), Query Frame = -1 Query: 265 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 732 P+ R PRG+G+G + + PL IG+ IL EG+ + I+ YGS+V + A +LK+++I+ + +ARF KPLD LI LA+ + ++T+EEG+ +GGFGS + + I + + + +PD +DH SP E+ GL ++ ++ Sbjct: 470 PTALRIPRGSGLGVAV-MDEGWEPLNIGEAEILEEGNDILIIAYGSMVASALETAELLKAKNINSCIVNARFVKPLDKKLIMPLASRIQKVVTMEEGTLIGGFGSAIVELFNDNEI---NIPVYRIGIPDVLVDHASPDQSKEKLGLMPNQMADNII 622
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_POLNA (1-deoxy-D-xylulose-5-phosphate synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=dxs PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.877e-20 Identity = 65/169 (38.46%), Postives = 90/169 (53.25%), Query Frame = -1 Query: 253 TAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 756 T A D P R+PRG G G K P GKG I EG +AIL +G+++ + AA L TV + R+ KPLDT+L+ ++A HE+L+T+EEG++ GG GS V L +G++ L+L L D +I+HG A L GL + I A V S G Sbjct: 461 TTAFEQDSPVAVRYPRGAGAGVEPEAGLKSLPF--GKGEIRREGSGIAILAFGTLLYPALQAAEKL-----GATVVNMRWAKPLDTELLLKVAAGHEVLVTLEEGAIMGGAGSAVGEALQAAGVVKPLLQLG---LKDEFIEHGEVAVLLALQGLDAAGIEAAVRSRFG 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SYNPW (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain WH7803) GN=dxs PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.981e-20 Identity = 58/165 (35.15%), Postives = 93/165 (56.36%), Query Frame = -1 Query: 244 PSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPK 732 P R PRG G G +P +G PL IG+G +L +GD + I+ YG++ + + A++L S + TV +ARF +PLD +L+ LA ++T+EEG++ GGFGS + L + I L+L +PD +DH +P E+ GL+ ++ ++ L R K Sbjct: 470 PCAIRIPRGPGEG--VPLMEEGWEPLPIGRGEVLRDGDDLLIVAYGAMNSKALATADLLASCGVQSTVVNARFLRPLDDELLHPLARRIGKVVTIEEGTLAGGFGSALTESLLDADIKPSILRLG---IPDVLVDHATPQQSFEKLGLTPAQMAESIQGFLQRSK 629
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SHESA (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain ANA-3) GN=dxs PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.981e-20 Identity = 63/171 (36.84%), Postives = 92/171 (53.80%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T D PS R+PRG+ GA T L IGKG I G +A+L +G+ LAA + ++ + TV D RF KPLD DL++++A H++L+TVEE ++ GG GS V L L L P + + LPD +I HGSP + + L + + A + + L Sbjct: 460 MLYTGYCYDAGPSAVRYPRGSATGATQV--EAMTALPIGKGVIKRLGKGIAMLNFGTT-----LAAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGV---LELLQKLKMPKPVLQIGLPDEFIKHGSPEEVTHDLQLDAEGMLAQINAFL 620 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |