CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HAEIN (1-deoxy-D-xylulose-5-phosphate synthase OS=Haemophilus influenzae GN=dxs PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.613e-19 Identity = 58/166 (34.94%), Postives = 94/166 (56.63%), Query Frame = -1 Query: 250 RPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 735 +P+ R+PRGN +G L TPLE IGK R++ +G ++AIL +G++ L + + S+ ++ TV D RF KP+D ++I LA H+ L+T+EE ++ GG GS V L SG L+L LPD +I + + L + GL ++ I +L+ + + Sbjct: 470 KPAAVRYPRGNAVGVKL------TPLEMLPIGKSRLIRKGQKIAILNFGTL-----LPSALELSEKLNATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG---LPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HAEIE (1-deoxy-D-xylulose-5-phosphate synthase OS=Haemophilus influenzae (strain PittEE) GN=dxs PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.613e-19 Identity = 58/166 (34.94%), Postives = 94/166 (56.63%), Query Frame = -1 Query: 250 RPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 735 +P+ R+PRGN +G L TPLE IGK R++ +G ++AIL +G++ L + + S+ ++ TV D RF KP+D ++I LA H+ L+T+EE ++ GG GS V L SG L+L LPD +I + + L + GL ++ I +L+ + + Sbjct: 470 KPAAVRYPRGNAVGVKL------TPLEMLPIGKSRLIRKGQKIAILNFGTL-----LPSALELSEKLNATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG---LPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ENTS8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=dxs PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.613e-19 Identity = 62/167 (37.13%), Postives = 90/167 (53.89%), Query Frame = -1 Query: 268 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 765 M+ T +D PS R+PRGN +G L K L IGKG + G++VA+L +G+++ + AA L + T+ D RF KPLD LI +LA HE L+T+EE +V GG GS V L P+ + ++ LPD +I G+ + E GL++ I V Sbjct: 460 MLFTGYHYNDGPSAVRYPRGNALGVTLEPLQK---LPIGKGVVKRHGEKVALLNFGTLLPEATQAAEALNA-----TLVDMRFVKPLDEALIMELAGRHEALVTIEENAVMGGAGSGVNEVLMAK---RKPVPVLNIGLPDHFIPQGTQDEARAEIGLTASGIEQRV 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_YERE8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.413e-19 Identity = 59/156 (37.82%), Postives = 88/156 (56.41%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R+PRGNG GAVL + IGKG + EG++VAIL +G+++ Q + A+ +++ T+ D RF KPLD +L+ +LA HE+L+TVEE ++ GG GS V L L L L LPD ++ G + E GL + I + + Sbjct: 470 PAAVRYPRGNGTGAVLEPL---AIMPIGKGIVRREGEKVAILCFGTLLAQAQIVAD-----NLNATLVDMRFVKPLDEELVLELAASHEVLVTVEENAIMGGAGSGVNELLMAKRQLVSVLNLG---LPDHFVPQGEQDEMRAEFGLDAAGIQSQI 614
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SYNPX (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain WH8102) GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.413e-19 Identity = 56/146 (38.36%), Postives = 85/146 (58.22%), Query Frame = -1 Query: 307 DRPSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLE 738 D P+ R PRG+G+G +P +G L IG+G +L EGD + I+ YGS+V + A +L+ +S TV +ARF +PLD LI LA ++T+EEG++ GGFG+ V L+ I + L + +PD+ +DH +P E Sbjct: 468 DGPTALRIPRGSGVG--MPLMEEGWEALPIGRGELLREGDDLLIVAYGSMVHPALDTATLLEEAGLSTTVINARFLRPLDQALIHPLARRIRRVVTMEEGALAGGFGAAVLESLSDQDI---SIPLLRIGIPDKMVDHATPQQSKE 608
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SHEFN (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella frigidimarina (strain NCIMB 400) GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.413e-19 Identity = 60/171 (35.09%), Postives = 94/171 (54.97%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T D P+ R+PRG GA + T + IGKG + +G ++AI+ +G+ ++ AA L + T+AD RF KPLD L+ QLAN H++++TVEE ++ GG GS V L I+ L++ LPD +I HG+P + E L ++ I A + + + Sbjct: 460 MLYTGYCYQDGPTAVRYPRGFATGA--EQIDTMTMIPIGKGVLTRQGQKIAIVNFGTTLEAATDAAEKLDA-----TIADMRFVKPLDLGLLEQLANSHDVIVTVEENAIMGGAGSGVIEALHKMRIVKPVLQIG---LPDEFIKHGAPDEITAELQLDAQGILAQIQAFM 620
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PROM0 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9301) GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.413e-19 Identity = 52/147 (35.37%), Postives = 86/147 (58.50%), Query Frame = -1 Query: 295 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGL 732 P+ R PRG+G+G + + PL IG+ I+ G+ + I+ YGS+V + A +LK+ +I+ + +ARF KPLD +LI LA+ + ++T+EEG+ +GGFGS + + I + + + +PD +DH SP E+ GL Sbjct: 470 PTALRIPRGSGLGVAI-MDEGWEPLNIGEAEIIEGGEDILIIAYGSMVASAIETAKILKNMNINACIVNARFVKPLDKNLIMPLASRIQKVVTMEEGTLIGGFGSAIVELFNDNEI---NIPVYRIGIPDVLVDHASPDQSKEKLGL 612
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HAEI8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Haemophilus influenzae (strain 86-028NP) GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.413e-19 Identity = 58/166 (34.94%), Postives = 94/166 (56.63%), Query Frame = -1 Query: 250 RPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 735 +P+ R+PRGN +G L TPLE IGK R++ +G ++AIL +G++ L + + S+ ++ TV D RF KP+D ++I LA H+ L+T+EE ++ GG GS V L SG L+L LPD +I + + L + GL ++ I +L+ + + Sbjct: 470 KPAAVRYPRGNAVGVKL------TPLEMLPIGKSRLIRKGQKIAILNFGTL-----LPSALELSEKLNATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG---LPDYFIPQATRQEALADLGLDTKGIEEKILNFIAK 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BURPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia pseudomallei GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.413e-19 Identity = 62/167 (37.13%), Postives = 91/167 (54.49%), Query Frame = -1 Query: 268 AVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILM-----EGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 750 A+ P+ R+PRG G G T + +GKG + +G R+AIL +G++V + AA+ L + TVA+ RF KP+D +L++ LA H+ L+TVEEG V GG GS + SG + L+L LPDR++DHG PA L GL I+ ++ Sbjct: 459 ALQQPNPTAVRYPRGAGTGVATV--KAFTEIPLGKGEVRRRTSQPDGKRIAILAFGTMVAPSLAAADALDA-----TVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGSACVEAMMESGAVRPVLQLG---LPDRFVDHGDPAKLLSLCGLDGDGIAKSI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BURP1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia pseudomallei (strain 1710b) GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.413e-19 Identity = 62/167 (37.13%), Postives = 91/167 (54.49%), Query Frame = -1 Query: 268 AVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILM-----EGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 750 A+ P+ R+PRG G G T + +GKG + +G R+AIL +G++V + AA+ L + TVA+ RF KP+D +L++ LA H+ L+TVEEG V GG GS + SG + L+L LPDR++DHG PA L GL I+ ++ Sbjct: 459 ALQQPNPTAVRYPRGAGTGVATV--KAFTEIPLGKGEVRRRTSQPDGKRIAILAFGTMVAPSLAAADALDA-----TVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGSACVEAMMESGAVRPVLQLG---LPDRFVDHGDPAKLLSLCGLDGDGIAKSI 615 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |