CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS2_GEOSL (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Geobacter sulfurreducens GN=dxs2 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.930e-19 Identity = 58/175 (33.14%), Postives = 91/175 (52.00%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAI-LGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HM+ TA + + P+ R+PRGNG+G +P + P+ +G +L G + L G++V + AAN L+ + I +TV + RF KPLD +LI L+T+EE + GGFGS V L G+ G + + PDRY++ G + GL + I+ + +L R Sbjct: 457 HMLKTA-IDHNGPAAVRYPRGNGLG--VPLDQSLAPIPLGTSEVLRAGSGTCVVLAVGAMVGPALEAANTLEGEGIDLTVVNVRFVKPLDRELILSYVGRAGTLVTIEENVLQGGFGSAVLELLADEGV--GGVAVHRFGYPDRYVEQGEQHELRSRYGLDAEGIAGRIRTLSAR 626
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_YERPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Yersinia pseudotuberculosis GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.694e-18 Identity = 58/159 (36.48%), Postives = 92/159 (57.86%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R+PRGNG GAVL PLE IGKG + EG+++AIL +G+++ Q LAA ++++ T+ D RF KPLD +L+ ++A +H++L+TVEE ++ GG GS V L + + ++ LPD ++ G + E GL + I + Sbjct: 470 PAAVRYPRGNGTGAVLE------PLEMLPIGKGVLRREGEKIAILCFGTLLAQAQLAA-----ENLNATLVDMRFVKPLDEELVLEMAAKHQVLVTVEENAIMGGAGSGVNELLMAKRRW---VPVLNIGLPDLFVPQGEQDEMRSELGLDAAGIQRQI 614
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_YERPB (1-deoxy-D-xylulose-5-phosphate synthase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.694e-18 Identity = 58/159 (36.48%), Postives = 92/159 (57.86%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R+PRGNG GAVL PLE IGKG + EG+++AIL +G+++ Q LAA ++++ T+ D RF KPLD +L+ ++A +H++L+TVEE ++ GG GS V L + + ++ LPD ++ G + E GL + I + Sbjct: 470 PAAVRYPRGNGTGAVLE------PLEMLPIGKGVLRREGEKIAILCFGTLLAQAQLAA-----ENLNATLVDMRFVKPLDEELVLEMAAKHQVLVTVEENAIMGGAGSGVNELLMAKRRW---VPVLNIGLPDLFVPQGEQDEMRSELGLDAAGIQRQI 614
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_VEREI (1-deoxy-D-xylulose-5-phosphate synthase OS=Verminephrobacter eiseniae (strain EF01-2) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.694e-18 Identity = 64/171 (37.43%), Postives = 92/171 (53.80%), Query Frame = -1 Query: 268 TAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILME-------GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 756 ++A + P R+PRG+G G G P GKG I E R+AIL +GS++ + AA+ L + TV + R+ KPLD L+RQ+A H+ L+T+EEG++ GG GS V L +GIL L+L L D +I+HG PA L GL++ I A + Sbjct: 460 SSAYAQNHPVAVRYPRGSGAGVAPLAGLDGLPF--GKGEIRRERQRQDSNAPRIAILAFGSLLYPALEAADALDA-----TVVNMRWAKPLDDALLRQVAEGHDALVTLEEGAIMGGAGSAVTETLNAAGILRPVLQLG---LADIFIEHGDPAKLLAMQGLNAAGIRAAI 620
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SYNS9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain CC9902) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.694e-18 Identity = 57/163 (34.97%), Postives = 89/163 (54.60%), Query Frame = -1 Query: 253 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 738 D P+ R PRG+G G +L L IG+G +L EG+ + I+ YGS+V + A +L++ +S +V +ARF +PLD LI LA ++T+EEG++ GGFG+ V L I L++ +PD+ +DH +P E GL+ +S + G Sbjct: 468 DGPTALRIPRGSGEGVLLMEEG-WEALPIGRGELLREGNDLVIVAYGSMVAPAMETAALLEASGLSASVINARFLRPLDQALIHPLARRVPRVVTMEEGTLSGGFGAAVLESLNDHDINVPVLRIG---IPDQLVDHATPQQSKEALGLTPNQMSLKIQQRFG 626
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SHIDS (1-deoxy-D-xylulose-5-phosphate synthase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.694e-18 Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGTVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDETLILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_NEIG2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.694e-18 Identity = 59/158 (37.34%), Postives = 85/158 (53.80%), Query Frame = -1 Query: 268 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 738 D P+ R+PRG G GA P ++ +EIGKG I EG++ A + +GS+V + A L + TVAD RF KP+D +LI +LA H+ ++T+EE + GG G V L GI L L + D +HG P L++ GLS+ + V Sbjct: 479 DAPAAVRYPRGTGTGA--PVSDGMETVEIGKGIIRREGEKTAFIAFGSMVAPALAVAEKLNA-----TVADMRFVKPIDEELIVRLARSHDRIVTLEENAEQGGAGGAVLEVLAKHGICKPVLLLG---VADTVTEHGDPKKLLDDLGLSAEAVERRV 626
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_NEIG1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.694e-18 Identity = 59/158 (37.34%), Postives = 85/158 (53.80%), Query Frame = -1 Query: 268 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 738 D P+ R+PRG G GA P ++ +EIGKG I EG++ A + +GS+V + A L + TVAD RF KP+D +LI +LA H+ ++T+EE + GG G V L GI L L + D +HG P L++ GLS+ + V Sbjct: 479 DAPAAVRYPRGTGTGA--PVSDGMETVEIGKGIIRREGEKTAFIAFGSMVATALAVAEKLNA-----TVADMRFVKPIDEELIVRLARSHDRIVTLEENAEQGGAGGAVLEVLAKHGICKPVLLLG---VADTVTEHGDPKKLLDDLGLSAEAVERRV 626
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HAEPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.694e-18 Identity = 61/170 (35.88%), Postives = 96/170 (56.47%), Query Frame = -1 Query: 259 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSL 765 M+ TA ++ P R+PRGN G L LEIGKG++L +G++VAIL +G+++ + A + + T+ D RF KPLD LI +LA+ HE+L+T+EE ++ GG GS V +L G + L L +PD +I + A+ + GL ++ I +LS+ Sbjct: 457 MLYTAYTMNS-PVAVRYPRGNAQGVELQPMQA---LEIGKGKVLKQGEKVAILNFGALLNEAKQVA-----ETHNYTLVDMRFAKPLDEALIAELADRHELLVTLEENALQGGAGSAVNEYLQHIGKIKPLLMLG---IPDFFIPQATQAESYADLGLDAKGIEQKILSM 614
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_DESPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfotalea psychrophila GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.694e-18 Identity = 59/163 (36.20%), Postives = 87/163 (53.37%), Query Frame = -1 Query: 256 DRPSCFRFPRGNGIGAVLPXNNKGTP-LEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 738 D P+ R+PRG G + P LEIG+G +L EGD + +L G+ V + AA L Q IS +V + RF KPLD +LI Q A + +IT+E+ ++ GFGS V L+ + +K + + P +++HG E SG++SR I L LL Sbjct: 474 DGPTAIRYPRGAGEDVSTSQEIESIPILEIGRGELLREGDDILLLPIGNRVYPAMRAAEELAKQGISASVINPRFIKPLDAELICQQAKKTGRIITIEDNTLCSGFGSAVLELLSQKSLYG--IKTKILGHPHAFVEHGPQKTLWENSGITSRGIIMAALDLL 634 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |