CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CYTH3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=dxs PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.889e-18 Identity = 59/164 (35.98%), Postives = 92/164 (56.10%), Query Frame = -1 Query: 253 PSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 732 P R+PRG G V+P N TP E IGKGR + +GD VAIL G + + A +L+ +++S D RF KP+D +++ + + + +ITVE+G +GGFGS V F+ + ++L +PDR ++HG A+ +E G + I+ TV +L G Sbjct: 477 PFSIRYPRGQG---VMP--NWKTPFEEITIGKGRKVSDGDDVAILSIGHIGNYVIEAKALLREEELSPAHFDMRFVKPIDEEMLHLVFKKFKKIITVEDGCLMGGFGSAVLEFMADNNYAAQVIRLG---IPDRIVEHGEQAELHKECGFDPQSIARTVRNLSG 632
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ANADF (1-deoxy-D-xylulose-5-phosphate synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=dxs PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.889e-18 Identity = 58/176 (32.95%), Postives = 90/176 (51.14%), Query Frame = -1 Query: 253 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILME---GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 768 HM+ TA + D P+ FRFPRG G G L L IGKGR+ V ++ G+ + + AA L ++ +V DARF KPLD +LI A ++T+EEG + GGFG+ G++ L+++ + LPD ++ HG Q + GL + I+ +++G Sbjct: 456 HMLHTA-LHHDGPAAFRFPRGAGEGVALEAPQV---LPIGKGRLARAVPGKPDVCVVALGTTLHAALAAAEALAKDGVAASVVDARFAKPLDEELIAGEAERARCVVTIEEGCLPGGFGAACLELFERRGLVAEGLRVKRLGLPDEFVTHGDQGRQRAQLGLDADGIARACRAIVG 627
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SHIBS (1-deoxy-D-xylulose-5-phosphate synthase OS=Shigella boydii serotype 4 (strain Sb227) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18 Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SHIB3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18 Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_FRAP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18 Identity = 58/164 (35.37%), Postives = 91/164 (55.49%), Query Frame = -1 Query: 244 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPK 732 P+ R+PRG GIGA + N +++GK +++ +G RVAIL +G+++ AN L + +TV D RF KPLD +I Q+ H I+ T+EE S+ GG GS V ++ + L + +R+ L D ++ HG+ L+ S LS I+ + LL K Sbjct: 464 PAMVRYPRGAGIGAEITDN---LDIKLGKAKLVKKGSRVAILNFGTLLP----LANQLADK-YHITVVDMRFVKPLDEQMINQICQNHNIVFTLEESSIAGGAGSAVNEYI-FANDLSKNITVRNFGLKDEFLTHGTKDLLLDYSNLSFNKIAEVLEKLLSHKK 618
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ESCF3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18 Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE LIT+EE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALITIEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ECOUT (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli (strain UTI89 / UPEC) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18 Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ECOSM (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=dxs PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18 Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEIAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ECOLI (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli (strain K12) GN=dxs PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18 Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ECOL6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli O6 GN=dxs PE=3 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18 Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++AIL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGIVKRRGEKLAILNFGTLMPEAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDATGMEAKIKAWL 619 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |