CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_AQUAE (1-deoxy-D-xylulose-5-phosphate synthase OS=Aquifex aeolicus GN=dxs PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.928e-18 Identity = 54/141 (38.30%), Postives = 78/141 (55.32%), Query Frame = -1 Query: 328 VIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHG 747 + +P R+PRG G K +EIG L+EG+ IL G V Q + AA L + I V V +ARF KP+D ++R LAN ++ ITVE+ + VGGFGS V F GI+ ++ ++ +PDR+I+HG Sbjct: 464 IYSGKPFALRYPRGAAYGVPTEGFKK---IEIGTWEELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIMK---RVINLGVPDRFIEHG 598
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ANASK (1-deoxy-D-xylulose-5-phosphate synthase OS=Anaeromyxobacter sp. (strain K) GN=dxs PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.928e-18 Identity = 60/179 (33.52%), Postives = 95/179 (53.07%), Query Frame = -1 Query: 244 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILME---GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPK 768 HM+ T+ + + P+ R+PRG G G L LEIGKGR++ V ++ G+ ++ + AA L ++ ++ TV D RF KPLD +LI A + ++TVEEG + GGFG+ G+L+ L +R + +PD +I H A Q G+ + I+A +L+G K Sbjct: 457 HMLHTS-LQHEGPAALRYPRGAGEGVAL---EPARVLEIGKGRLVRNVPGKPDVCVVAAGTTLKAALAAAEALAAEGVAATVVDPRFVKPLDEELICAEAARAKRVVTVEEGCLAGGFGTACLEAFERRGLLEAGLGVRRLGIPDEFITHAEQAKQRAWVGIDADAIAAACRALVGDRK 631
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SYNS3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain CC9311) GN=dxs PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.436e-18 Identity = 55/159 (34.59%), Postives = 88/159 (55.35%), Query Frame = -1 Query: 268 DRPSCFRFPRGNGIGAVLPXNNKG-TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 738 D P+ R PRG G G +P +G L IG G ++ EG+ V I+ YG++V + + A L + + V V +AR+ +PLD LI +A + ++T+EEG++ GGFGS V L G+ L++ +PDR +DH +P E GL+ ++ + Sbjct: 468 DGPTALRIPRGPGEG--VPLMEEGWEALPIGCGEVVREGNDVLIVAYGAMVPKAMATAKCLAAVGVEVAVINARYLRPLDEALIHPMAKQIGKIVTMEEGALAGGFGSAVLESLQEKGLAIPMLRIG---IPDRLVDHATPQQSFEALGLTPDQMAVRI 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SHISS (1-deoxy-D-xylulose-5-phosphate synthase OS=Shigella sonnei (strain Ss046) GN=dxs PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.436e-18 Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++AIL +G+++ A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGIVKRRGEKLAILNFGTLMPDAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SACD2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dxs PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.436e-18 Identity = 57/158 (36.08%), Postives = 84/158 (53.16%), Query Frame = -1 Query: 250 RFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 720 R+PRG G GAV+ N+ P IGKGR L +G V + +G ++ + A + + V D R+ KPLD DL+ +A +++ L+T+EE +V GG G+ V L GI L L LPD Y+DHG + L+ +GL I+ + L R Sbjct: 489 RYPRGTGPGAVIELENQHWP--IGKGRELRQGKTVCFINFGVLLPDAIAVA-----EANNYGVCDMRWAKPLDKDLLLNMAEQYDYLVTLEENAVAGGAGAGVMELLAAEGISTPVLPLG---LPDEYLDHGKRSQLLQAAGLDRASINQRINQWLSR 636
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_NEIMF (1-deoxy-D-xylulose-5-phosphate synthase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=dxs PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.436e-18 Identity = 60/162 (37.04%), Postives = 85/162 (52.47%), Query Frame = -1 Query: 256 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 738 D P+ R+PRG G GA P ++ +EIGKG I EG + A + +GS+V + A L + TVAD RF KP+D +LI +LA H+ ++T+EE + GG G V L GI L L + D HG P L++ GLS+ + V + L Sbjct: 479 DAPAAVRYPRGTGTGA--PVSDGMETVEIGKGIIRREGGKTAFIAFGSMVAPALAVAGKLNA-----TVADMRFVKPIDEELIVRLARSHDRIVTLEENAEQGGAGGAVLEVLAKHGICKPVLLLG---VADTVTGHGDPKKLLDDLGLSAEAVERRVRAWL 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_NEIM0 (1-deoxy-D-xylulose-5-phosphate synthase OS=Neisseria meningitidis serogroup C (strain 053442) GN=dxs PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.436e-18 Identity = 59/162 (36.42%), Postives = 86/162 (53.09%), Query Frame = -1 Query: 256 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 738 D P+ R+PRG G G +P ++ +EIGKG I EG++ A + +GS+V + A L + TVAD RF KP+D +LI +LA H+ ++T+EE + GG G V L GI L L + D HG P L++ GLS+ + V + L Sbjct: 477 DAPAAVRYPRGTGTG--VPVSDGMETVEIGKGIIRREGEKTAFIAFGSMVAPALAVAEKLNA-----TVADMRFVKPIDEELIVRLARSHDRIVTLEENAEQGGAGGAVLEVLAKHGICKPVLLLG---VADTVTGHGDPKKLLDDLGLSAEAVERRVRAWL 628
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ECOSE (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli (strain SE11) GN=dxs PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.436e-18 Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++AIL +G+++ A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGIVKRRGEKLAILNFGTLMPDAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ECOLC (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=dxs PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.436e-18 Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++AIL +G+++ A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGIVKRRGEKLAILNFGTLMPDAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ECOHS (1-deoxy-D-xylulose-5-phosphate synthase OS=Escherichia coli O9:H4 (strain HS) GN=dxs PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.436e-18 Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++AIL +G+++ A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGIVKRRGEKLAILNFGTLMPDAAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |