CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_YERP3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=dxs PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.406e-18 Identity = 57/159 (35.85%), Postives = 91/159 (57.23%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R+PRGNG AVL PLE IGKG + EG+++AIL +G+++ Q LAA ++++ T+ D RF KPLD +L+ ++A +H++L+TVEE ++ GG GS V L + + ++ LPD ++ G + E GL + I + Sbjct: 470 PAAVRYPRGNGTSAVLE------PLEMLPIGKGVLRREGEKIAILCFGTLLAQAQLAA-----ENLNATLVDMRFVKPLDEELVLEMAAKHQVLVTVEENAIMGGAGSGVNELLMAKRRW---VPVLNIGLPDLFVPQGEQDEMRSELGLDAAGIQRQI 614
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_EDWI9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Edwardsiella ictaluri (strain 93-146) GN=dxs PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.406e-18 Identity = 65/173 (37.57%), Postives = 91/173 (52.60%), Query Frame = -1 Query: 250 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 765 M+ T + PS R+PRG G GA L L IGKG + G+R+AIL +GS++ Q + AA L + +VAD RF KPLD L+R LA +HE L+T+EE +V GG GS V L L P + ++ L D ++ GS + + L + I A + L R Sbjct: 460 MLQTGYEYREGPSAVRYPRGTGTGAPLTPPQA---LPIGKGVLRRRGERIAILNFGSLLPQALEAAERLNA-----SVADMRFVKPLDDALVRSLAEQHEYLVTLEENAVMGGAGSGVNELLMQ---LRLPRPVLNIGLQDSFVPQGSQEEIRRDLQLDADGILAQLEGWLAR 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PHOLL (1-deoxy-D-xylulose-5-phosphate synthase OS=Photorhabdus luminescens subsp. laumondii GN=dxs PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.098e-17 Identity = 57/167 (34.13%), Postives = 92/167 (55.09%), Query Frame = -1 Query: 268 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 765 M+ T P R+PRG G GA + L IGKG I +G++VAIL +G+++ + AA + + TV D RF KPLD +LI +A+ H++L+T+EE ++ GG GS V L G L +++ ++ LPD+++ GS + + GL + I ++ Sbjct: 460 MLHTGYHYQQGPVAVRYPRGTGTGAEPQPFEQ---LPIGKGVIRRQGNKVAILNFGTLLPDAITAA-----ESLDATVVDMRFVKPLDKELILDMADNHDLLVTLEENAIMGGAGSGVNELLMQKGRL---VQILNIGLPDQFVPQGSQEEIKADLGLDAAGIQNSI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_KLEP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dxs PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.098e-17 Identity = 59/167 (35.33%), Postives = 90/167 (53.89%), Query Frame = -1 Query: 268 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 765 M+ T D P R+PRG+G GA L L IGKG + +G+++AIL +G+++ + A+ L + T+ D RF KPLDT LI QLA EH+ L+T+EE ++ GG GS V L + + ++ LPD +I G+ + + GL + I A + Sbjct: 460 MLYTGYHYSDGPCAVRYPRGSGTGATLEPL---ASLPIGKGVVKRQGEKIAILNFGTLLPEAAAVADKLNA-----TLVDMRFVKPLDTALILQLAGEHDALVTLEENAIMGGAGSGVNEVLMAH---RRAVPVLNIGLPDYFIPQGTQEEIRADLGLDAAGIEAKI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_KLEP3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Klebsiella pneumoniae (strain 342) GN=dxs PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.098e-17 Identity = 59/167 (35.33%), Postives = 90/167 (53.89%), Query Frame = -1 Query: 268 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 765 M+ T D P R+PRG+G GA L L IGKG + +G+++AIL +G+++ + A+ L + T+ D RF KPLDT LI QLA EH+ L+T+EE ++ GG GS V L + + ++ LPD +I G+ + + GL + I A + Sbjct: 460 MLHTGYHYSDGPCAVRYPRGSGTGATLEPL---ASLPIGKGVVKRQGEKIAILNFGTLLPEAAAVADKLNA-----TLVDMRFVKPLDTALILQLAGEHDALVTLEENAIMGGAGSGVNEVLMAH---RRAVPVLNIGLPDYFIPQGTQEEIRADLGLDAAGIEAKI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SHIFL (1-deoxy-D-xylulose-5-phosphate synthase OS=Shigella flexneri GN=dxs PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.434e-17 Identity = 60/174 (34.48%), Postives = 93/174 (53.45%), Query Frame = -1 Query: 256 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLE---IGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 765 M+ T +D PS R+PRGN +G L TPLE IGKG + G+++ IL +G+++ + A + ++ T+ D RF KPLD LI ++A HE L+TVEE ++ GG GS V L P+ + ++ LPD +I G+ + E GL + + A + + L Sbjct: 460 MLYTGYHYNDGPSAVRYPRGNAVGVEL------TPLEKLPIGKGIVKRRGEKLVILNFGTLMPETAKVA-----ESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PARD8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=dxs PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.434e-17 Identity = 51/165 (30.91%), Postives = 90/165 (54.55%), Query Frame = -1 Query: 277 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHIS 768 +++ T D P R+PRG G + N+ L IGKG+ L +GD +A+L G + + + A M+K + +S+ D + KPLD +L+ ++ ++ +ITVE G + GGFGS V F+ +G ++ + +PD +I+HGS + + G+ + I+ Sbjct: 466 NLMYTGYAAFDGPFVIRYPRGKG--EMKDWRNEMQVLPIGKGKKLRDGDDIAVLSIGPIGNEVIKAIEMVKEERVSIAHYDMIYLKPLDEELLHEIGQKYNRIITVENGVIKGGFGSAVLEFMADNGYTP---HVKRIGVPDAFIEHGSIPELYQLCGMDAESIA 625
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_NITOC (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dxs PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.434e-17 Identity = 59/164 (35.98%), Postives = 88/164 (53.66%), Query Frame = -1 Query: 250 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 738 ++P+ R+PRG G G + + PL GK + +G +AIL +G+ V + AA L + TV + RF KPLD DL+ ++A HE+L+TVE+ + GG GS V L G+ PL L LPD +++HGS LE+ L++ I V + R Sbjct: 470 NQPAAVRYPRGKGPGVAVEASMTALPL--GKAELKRKGRGIAILAFGATVAPALEAAEKLDA-----TVVNMRFVKPLDEDLVLEMAMNHELLVTVEDNVIAGGAGSAVSECLAYHGV-SVPLLLHG--LPDNFLEHGSREALLEQCHLNAEGILQRVKTYRAR 623
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SERP5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Serratia proteamaculans (strain 568) GN=dxs PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.873e-17 Identity = 58/167 (34.73%), Postives = 90/167 (53.89%), Query Frame = -1 Query: 268 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 765 M+ T ++ PS R+PRGNG GA L N L IGKG + EG+++AIL +G+++ + A L + T+ D RF KPLD LI +LA H+ L+T+EE ++ GG GS V L + + + ++ LPD ++ GS + + GL + I + Sbjct: 460 MLYTGYHYNEGPSAVRYPRGNGTGAPLEPLNS---LPIGKGVVRREGEKLAILNFGTLLPEAAQVAETLNA-----TLVDMRFVKPLDEQLILELAASHDALVTLEENAIMGGAGSGVNELLMARRRV---VPVLNIGLPDFFVSQGSQEEVRSDLGLDAAGIQRQI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PSEHT (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=dxs PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.873e-17 Identity = 50/160 (31.25%), Postives = 93/160 (58.13%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P R+PRG+ A + N + LEIGK ++ +G +VAIL +G++++ LAA+ +++ T+ + RF KPLDT L+ +L N H++++T+E+ ++ GG GS V +L + + ++ +PD +I HG+ + +E GL + I + + + Sbjct: 470 PVAVRYPRGSAGTAEIATNMQ--LLEIGKADVVKQGAKVAILSFGTLLENAQLAAD-----ELNATLVNMRFIKPLDTALLDELINSHDVIVTLEDNAISGGAGSAVNEYLATQ---KAQVSILNLGIPDEFIKHGTQDEMHDEMGLGEQGILTAIKAFI 619 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |